Plant GARDEN
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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043383
CDS Infomation

pacid=37458800 polypeptide=PGSC0003DMP400029427 locus=PGSC0003DMG400016842 ID=PGSC0003DMT400043383.v4.03 annot-version=v4.03
Sequence

ATGGCCAAGAAAAACAAGAGAAGGAGAAATAATGCGGCTGCATCTAGTTCTGGAAGAGTA
CCTCAAGACAATAAAACCCCAAAGGAACTAATGGCTAAAGGTAAACTTGCAAAAAAATCC
AACTTAAACTCTGCACAAATGAAAGAAGCTGACGCCACTCCACAGTCTCAATCCAGAAAC
ATGGAGAAGAACATAAAAGATGGCAACCAAGGAAATAATGTTGAGGCCACTCCACGATCT
CAATCCAGAAACAAGGAGAAGAACATAAAAGATGACAATCAAGGAAATAATTTTGACAAA
AAAGATGCTAGGAAGTCCCTAAACATAAAAAGTGGAAACAAAGGAAAGGGAAGTGCAAGT
GAAATGAGGGTAGATGTGGAGGACGGAAAAGCTGACAAGGGTATTGGTGGAGTGATTTTC
ATGTGTAATGCAAAGACCAAAGATGATTGTTTTAAATATCATGTGATGGGTGTCTCAGCT
ATGAAGAAAGACATTATTTTGGGAATCAAACCTGGTGTCAAGCTTTATCTCTTTGATGTT
GATCTTAAGCTCATGTATGGTATTTATGAGGCTTCATCTGCTGGTGGAATGAAACTTGAA
CCAGCGGCATTTGGTGGGGACTTCCCAGCGCAGGTTCGCTTCAGGATTTACAAGGACTGC
CTTCCATTGACGGAGAATTTGTTCAAGAGAGCAATTCAAGAGAATTATGATGAAAGGACT
CACAAGTTCAAGACTGAGTTGACATTTAAGCAGGTAGGGCAGTTGAAAAAGCTGTTTACG
CCAGCACCATGGCTACATCCAACTTCCAAACATTCTGTGTCATATCCAGTTAGTCTGCCC
CCATCAGCAGCACCTTTACCTAGCAAGGAACCTTCCAGGGAGCATGTTGGATTGCAATAC
GGAAGAAGCAAAGCAGGTGAGAATTTTTCATCATATGGTCATGAAAGGGAAAGGCAGCAG
CATGCAGGCCGCCTTATCATGCCTAGAGAGGTTGACAGTGAACCTCGTTTCCTCACTGAG
AAAGAATATAGAAGCTATGGTCTTCAATCAGCAAAGCATCCGCAGGCCTTTGCTTCTGCA
GTAGTTGACCGCACATTGGATCATTATGAATCTGAACAAGGAAGGGAACATCTCCGAACA
AATCCCACTGGGATTACTAGTGATGCGGCTTTAGCACGAAAAGAAACTGTACTTACTGAA
CCTTTGTTTCCAAGCGAAAGGGAGTATCGAACTTACGGCCTCAAGTTTCGCAGTGAAATA
CCTGCTACTGTTGCTCCTGCTGTGGAAAGTGGTGCTACAGGAATTTCAGCCACACCTACC
AATCATAGTTTACTAAATCATGTTAAGGATAAGTATGATCCTTATGCCGAGAGTACTACC
TCACTTGTAAACCGATATCTCTCTCTGCCTCGGACAGTGGTAGCACCTGTAGTGTCATAC
TCTTCGACAGGCAGGGAGTCTTTTGTAAGTGACCCCTATTCTGCAATTGGCATCAAAGGC
CATACGGGAAAATTCCACGCTGAAAATGAAGGAGCATATCCACCCACGGGAAGATTCCAC
GCTGAAAATGAAAGAGCATATCCACCAACGGGAAGATTCCACACTGGAAATGAAAGAGCA
TATCCACCAATGGGGAGATTCCACACTGAAAATGAAAGAGCATATCCACCAACGGAGAGA
TTCTACACTGAAAATGAACGAGCATACCCACCAACGGGGAGATTCCACACTGAAAATGAA
AGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACG
GAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAATGGGGAGATTCCACACTGAA
AATGAAAGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCA
CCAACGGGAAGATTCCACACTGGAAATGAAAGAGCATATCCACCAATGGGGAGATTCCAC
ACTGAAAATGAAAGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCA
TATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGA
TTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAA
AGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACG
GAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAA
AATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCG
CCAACGGGGAGATTCCACTCTGAAAATGAAAGAGTATATCCATCAACGGAGAGATTCAGC
AGTGAAAATGAAAGAGCATATCCACTAACGGGGAGATTCCACACTGAAAGTGAAAGAGCA
TATCCACCGACGTGGAGATTAAACACTGAAAATGAAAGAGCATATCCACCATATGCTCCT
CAATTACCACCAGAGTACGGCTTGAAATATCACCATGTTAGGGATGAGCCTAGGTACCCA
GCTTTAGTCTCATCTCGCTATTCCCTTGGGGAACCATCTGCACCTCGTCGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029427
PEP Infomation

pacid=37458800 transcript=PGSC0003DMT400043383 locus=PGSC0003DMG400016842 ID=PGSC0003DMT400043383.v4.03 annot-version=v4.03
Sequence

MAKKNKRRRNNAAASSSGRVPQDNKTPKELMAKGKLAKKSNLNSAQMKEADATPQSQSRN
MEKNIKDGNQGNNVEATPRSQSRNKEKNIKDDNQGNNFDKKDARKSLNIKSGNKGKGSAS
EMRVDVEDGKADKGIGGVIFMCNAKTKDDCFKYHVMGVSAMKKDIILGIKPGVKLYLFDV
DLKLMYGIYEASSAGGMKLEPAAFGGDFPAQVRFRIYKDCLPLTENLFKRAIQENYDERT
HKFKTELTFKQVGQLKKLFTPAPWLHPTSKHSVSYPVSLPPSAAPLPSKEPSREHVGLQY
GRSKAGENFSSYGHERERQQHAGRLIMPREVDSEPRFLTEKEYRSYGLQSAKHPQAFASA
VVDRTLDHYESEQGREHLRTNPTGITSDAALARKETVLTEPLFPSEREYRTYGLKFRSEI
PATVAPAVESGATGISATPTNHSLLNHVKDKYDPYAESTTSLVNRYLSLPRTVVAPVVSY
SSTGRESFVSDPYSAIGIKGHTGKFHAENEGAYPPTGRFHAENERAYPPTGRFHTGNERA
YPPMGRFHTENERAYPPTERFYTENERAYPPTGRFHTENERANPPTERFNSENERAYPPT
ERFNSENERAYPPMGRFHTENERANPPTERFNSENERAYPPTGRFHTGNERAYPPMGRFH
TENERANPPTERFNSENERAYPPTERFNSENERAYPPTERFNSENERAYPPTERFNSENE
RAYPPTERFNSENERAYPPTERFNSENERAYPPTERFNSENERAYPPTERFNSENERAYP
PTGRFHSENERVYPSTERFSSENERAYPLTGRFHTESERAYPPTWRLNTENERAYPPYAP
QLPPEYGLKYHHVRDEPRYPALVSSRYSLGEPSAPRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400043383
Transcript Infomation

pacid=37458800 locus=PGSC0003DMG400016842 ID=PGSC0003DMT400043383.v4.03 annot-version=v4.03
Sequence

ATGGCCAAGAAAAACAAGAGAAGGAGAAATAATGCGGCTGCATCTAGTTCTGGAAGAGTA
CCTCAAGACAATAAAACCCCAAAGGAACTAATGGCTAAAGGTAAACTTGCAAAAAAATCC
AACTTAAACTCTGCACAAATGAAAGAAGCTGACGCCACTCCACAGTCTCAATCCAGAAAC
ATGGAGAAGAACATAAAAGATGGCAACCAAGGAAATAATGTTGAGGCCACTCCACGATCT
CAATCCAGAAACAAGGAGAAGAACATAAAAGATGACAATCAAGGAAATAATTTTGACAAA
AAAGATGCTAGGAAGTCCCTAAACATAAAAAGTGGAAACAAAGGAAAGGGAAGTGCAAGT
GAAATGAGGGTAGATGTGGAGGACGGAAAAGCTGACAAGGGTATTGGTGGAGTGATTTTC
ATGTGTAATGCAAAGACCAAAGATGATTGTTTTAAATATCATGTGATGGGTGTCTCAGCT
ATGAAGAAAGACATTATTTTGGGAATCAAACCTGGTGTCAAGCTTTATCTCTTTGATGTT
GATCTTAAGCTCATGTATGGTATTTATGAGGCTTCATCTGCTGGTGGAATGAAACTTGAA
CCAGCGGCATTTGGTGGGGACTTCCCAGCGCAGGTTCGCTTCAGGATTTACAAGGACTGC
CTTCCATTGACGGAGAATTTGTTCAAGAGAGCAATTCAAGAGAATTATGATGAAAGGACT
CACAAGTTCAAGACTGAGTTGACATTTAAGCAGGTAGGGCAGTTGAAAAAGCTGTTTACG
CCAGCACCATGGCTACATCCAACTTCCAAACATTCTGTGTCATATCCAGTTAGTCTGCCC
CCATCAGCAGCACCTTTACCTAGCAAGGAACCTTCCAGGGAGCATGTTGGATTGCAATAC
GGAAGAAGCAAAGCAGGTGAGAATTTTTCATCATATGGTCATGAAAGGGAAAGGCAGCAG
CATGCAGGCCGCCTTATCATGCCTAGAGAGGTTGACAGTGAACCTCGTTTCCTCACTGAG
AAAGAATATAGAAGCTATGGTCTTCAATCAGCAAAGCATCCGCAGGCCTTTGCTTCTGCA
GTAGTTGACCGCACATTGGATCATTATGAATCTGAACAAGGAAGGGAACATCTCCGAACA
AATCCCACTGGGATTACTAGTGATGCGGCTTTAGCACGAAAAGAAACTGTACTTACTGAA
CCTTTGTTTCCAAGCGAAAGGGAGTATCGAACTTACGGCCTCAAGTTTCGCAGTGAAATA
CCTGCTACTGTTGCTCCTGCTGTGGAAAGTGGTGCTACAGGAATTTCAGCCACACCTACC
AATCATAGTTTACTAAATCATGTTAAGGATAAGTATGATCCTTATGCCGAGAGTACTACC
TCACTTGTAAACCGATATCTCTCTCTGCCTCGGACAGTGGTAGCACCTGTAGTGTCATAC
TCTTCGACAGGCAGGGAGTCTTTTGTAAGTGACCCCTATTCTGCAATTGGCATCAAAGGC
CATACGGGAAAATTCCACGCTGAAAATGAAGGAGCATATCCACCCACGGGAAGATTCCAC
GCTGAAAATGAAAGAGCATATCCACCAACGGGAAGATTCCACACTGGAAATGAAAGAGCA
TATCCACCAATGGGGAGATTCCACACTGAAAATGAAAGAGCATATCCACCAACGGAGAGA
TTCTACACTGAAAATGAACGAGCATACCCACCAACGGGGAGATTCCACACTGAAAATGAA
AGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACG
GAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAATGGGGAGATTCCACACTGAA
AATGAAAGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCA
CCAACGGGAAGATTCCACACTGGAAATGAAAGAGCATATCCACCAATGGGGAGATTCCAC
ACTGAAAATGAAAGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCA
TATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGA
TTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAA
AGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACG
GAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAA
AATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCG
CCAACGGGGAGATTCCACTCTGAAAATGAAAGAGTATATCCATCAACGGAGAGATTCAGC
AGTGAAAATGAAAGAGCATATCCACTAACGGGGAGATTCCACACTGAAAGTGAAAGAGCA
TATCCACCGACGTGGAGATTAAACACTGAAAATGAAAGAGCATATCCACCATATGCTCCT
CAATTACCACCAGAGTACGGCTTGAAATATCACCATGTTAGGGATGAGCCTAGGTACCCA
GCTTTAGTCTCATCTCGCTATTCCCTTGGGGAACCATCTGCACCTCGTCGCTAA