Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043358
CDS Infomation

pacid=37477858 polypeptide=PGSC0003DMP400029410 locus=PGSC0003DMG400016833 ID=PGSC0003DMT400043358.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGGCTTTACCTGTGAGTGGTGAGAACTGCACCGGTGTAAACGTCGTCGGTGAT
AGTAGTGGTGAGAACCTGCAGGCTACTACAAGCAAGGAACTTTTTCACTGTGAAAACGGA
AAAATGGTTAGGAAGAGAGCGGCGTCTGACATGGAGATCCAGACCGGCGCCGGTGAAGAG
CATAGATATCTACGCCGGCCTGCTATAATAGGCGGGTCTCACTCTCAGATTGGTGATTTG
AGGGTTTGTGGAAATAGTAATTTTGGTCATGGTATGAACAGTAATACGACGACGACGATG
ACGACCCAGGTTTCTAACTACTCCACTATGCAAATGTTACCTTCTTCCACGAACTTGTGC
GGTGTGACGTCAAGAGGAGGGCCTGGGATTGATACCGGATTTTCTAATTCAACCCCAAAC
CTAACTTACACAGACGCCATAACATCGCATCATCAGCCACAACAAGGTACTCAAACCCAG
AACAACAACAACAGCAACAATCAATCCCCATCTGTTTGTGTTTTCTCCGGTTTGCCCCTT
TTTCCTCCGGATAGAAACCGACAAAACAGCGGTTTACTACTGCAGCAACCTCCTGCTGCT
GCAGCAGCTGTTGTATCTTCACCTCTTACAACTGGAAGAATCGATTCCATGGAGGATAGC
ACGTCGGCAACGGCATGGATTGACAGTATTATAAAGGATTTAATCAACAGCTCCGCTCAA
GTATCGGTGCCCCAACTCATCCAGAATGTAAGGGAGATAATCCACCCTTGCAATCCGTAT
CTCGCATCCCTGCTGGAGTACCGGCTTCGCTCTCTCACTAGTAATAATAATGGTGGTGCT
GATCAAAATGACCCCATGGAGTGCTGGAGAAGGAAAGAATCGCTGCCGCCACAGCTCGCT
GGTTTACAACAGGCCCAAAATAATGCCAATTTATTGCAGCACAATATTTTATCCCTTCCT
GATTCCTCAAATAATCAATACTTAAACTGGGAAATAGCTAACGCTCCGGTGGCGCCTTCT
CTGAACCAGCACCAGCAGCTTGGCGGCAATAATCCTACTACAACAGATCTTTCATTTGTT
ACACTTTCTCCTCAAGTGCAGCAACAGCAACAACAAGAATCTCCTCATTCTCGTTCTCAT
TCTCAGCAACAGGCCGCAGTAGACTTAGAGCAACAACAGAAGCAGCAGCAATCTTCTAGT
TCTCTATCTCCAACGTCGGTAGCTGACAATAGTGCCAAAACAAAAACTTCAACACCAGCT
CAACCAGTCCCGATCAACACGTACCGAGAAAAAAAGGAAGAAGAGCGACAACAGAAGAGG
GATGAAGAAGGATTACACCTTCTGACCTTGCTATTGCAATGTGCAGAAGCCGTATCCGCT
GATAATTTAGAAGAGGCAAATAAAATGCTATTAGAAGTATCCGAACTCTCCACACCGTTT
GGCACATCTGCACAGCGTGTTGCTGCATATTTCTCAGAAGCCATGTCAGCAAGGCTGTTG
AATTCATGCTTGGGAATATACGCAGCCCTACCAATGACCAGCGTCCCCATGCTTTACACA
CAGAAAATGGCATCCGCTTTCCAGGTGTTTAACGGAATCAGCCCCTTCATTAAATTCTCA
CATTTCACCGCCAATCAAGCTATACAAGAAGCTTTCGAGAGAGAAGACCGGGTACACATA
ATCGACCTTGATATAATGCAAGGTCTTCAATGGCCCGGTCTTTTCCACATCTTGGCTTCC
AGGCCCGGTGGACCTCCTTTTGTTCGGCTCACCGGGCTTGGAACATCCATGGATGCTCTT
GAAGCAACCGGCAAACGACTATCCGATTTTGCCGAGAGATTAGGCCTTCATTTCGAGTTT
TTACCAGTTGCTGATAAAGTTGGAAACTTGGACCCTGAGAAATTGAATGTGAGCAAGAGA
GAAGCTATAGCGGTTCATTGGTTGCAACATTCCCTTTACGATGTTACTGGCAGCGACTCT
AATACACTCTCCCTCTTGCAAAGGTTGGCTCCGAAGGTGGTGACGGTGGTGGAGCAGGAT
CTGAGCCACGCGGGTTCATTCCTAGGGAGGTTTGTAGAGGCAATACATTACTACTCAGCT
CTATTTGACTCACTGGGCGCGTGCTATGGGGAGGAGAGTGAAGAAAGACATGTGGTGGAG
CAACAACTATTGTCAAAGGAGATACGTAATGTACTAGCCGTAGGAGGTCCATCAAGGAGC
GGGGACGCGAAATTCAACAACTGGAGAGAGAAGCTTCAACAGTCTGGATTTAGATGCTTG
TCTCTTGCAGGTAATGCTGCTGCACAAGCTACTCTTTTACTCGGAATGTTCCCGTCTCAT
GGATACACTTTGGTTGAGGATAATGGAACTCTTAAGCTTGGATGGAAAGATCTTTGCTTG
TTTACTGCTTCTGCATGGAGACCTAATTCCTTGCATGCTGCACCAGGTTCTCGTCACTTC
TCTCGTCCTAATATGGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029410
PEP Infomation

pacid=37477858 transcript=PGSC0003DMT400043358 locus=PGSC0003DMG400016833 ID=PGSC0003DMT400043358.v4.03 annot-version=v4.03
Sequence

MAKALPVSGENCTGVNVVGDSSGENLQATTSKELFHCENGKMVRKRAASDMEIQTGAGEE
HRYLRRPAIIGGSHSQIGDLRVCGNSNFGHGMNSNTTTTMTTQVSNYSTMQMLPSSTNLC
GVTSRGGPGIDTGFSNSTPNLTYTDAITSHHQPQQGTQTQNNNNSNNQSPSVCVFSGLPL
FPPDRNRQNSGLLLQQPPAAAAAVVSSPLTTGRIDSMEDSTSATAWIDSIIKDLINSSAQ
VSVPQLIQNVREIIHPCNPYLASLLEYRLRSLTSNNNGGADQNDPMECWRRKESLPPQLA
GLQQAQNNANLLQHNILSLPDSSNNQYLNWEIANAPVAPSLNQHQQLGGNNPTTTDLSFV
TLSPQVQQQQQQESPHSRSHSQQQAAVDLEQQQKQQQSSSSLSPTSVADNSAKTKTSTPA
QPVPINTYREKKEEERQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEVSELSTPF
GTSAQRVAAYFSEAMSARLLNSCLGIYAALPMTSVPMLYTQKMASAFQVFNGISPFIKFS
HFTANQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGTSMDAL
EATGKRLSDFAERLGLHFEFLPVADKVGNLDPEKLNVSKREAIAVHWLQHSLYDVTGSDS
NTLSLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGACYGEESEERHVVE
QQLLSKEIRNVLAVGGPSRSGDAKFNNWREKLQQSGFRCLSLAGNAAAQATLLLGMFPSH
GYTLVEDNGTLKLGWKDLCLFTASAWRPNSLHAAPGSRHFSRPNMD*

Transcript Sequence

Transcript ID

PGSC0003DMT400043358
Transcript Infomation

pacid=37477858 locus=PGSC0003DMG400016833 ID=PGSC0003DMT400043358.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGGCTTTACCTGTGAGTGGTGAGAACTGCACCGGTGTAAACGTCGTCGGTGAT
AGTAGTGGTGAGAACCTGCAGGCTACTACAAGCAAGGAACTTTTTCACTGTGAAAACGGA
AAAATGGTTAGGAAGAGAGCGGCGTCTGACATGGAGATCCAGACCGGCGCCGGTGAAGAG
CATAGATATCTACGCCGGCCTGCTATAATAGGCGGGTCTCACTCTCAGATTGGTGATTTG
AGGGTTTGTGGAAATAGTAATTTTGGTCATGGTATGAACAGTAATACGACGACGACGATG
ACGACCCAGGTTTCTAACTACTCCACTATGCAAATGTTACCTTCTTCCACGAACTTGTGC
GGTGTGACGTCAAGAGGAGGGCCTGGGATTGATACCGGATTTTCTAATTCAACCCCAAAC
CTAACTTACACAGACGCCATAACATCGCATCATCAGCCACAACAAGGTACTCAAACCCAG
AACAACAACAACAGCAACAATCAATCCCCATCTGTTTGTGTTTTCTCCGGTTTGCCCCTT
TTTCCTCCGGATAGAAACCGACAAAACAGCGGTTTACTACTGCAGCAACCTCCTGCTGCT
GCAGCAGCTGTTGTATCTTCACCTCTTACAACTGGAAGAATCGATTCCATGGAGGATAGC
ACGTCGGCAACGGCATGGATTGACAGTATTATAAAGGATTTAATCAACAGCTCCGCTCAA
GTATCGGTGCCCCAACTCATCCAGAATGTAAGGGAGATAATCCACCCTTGCAATCCGTAT
CTCGCATCCCTGCTGGAGTACCGGCTTCGCTCTCTCACTAGTAATAATAATGGTGGTGCT
GATCAAAATGACCCCATGGAGTGCTGGAGAAGGAAAGAATCGCTGCCGCCACAGCTCGCT
GGTTTACAACAGGCCCAAAATAATGCCAATTTATTGCAGCACAATATTTTATCCCTTCCT
GATTCCTCAAATAATCAATACTTAAACTGGGAAATAGCTAACGCTCCGGTGGCGCCTTCT
CTGAACCAGCACCAGCAGCTTGGCGGCAATAATCCTACTACAACAGATCTTTCATTTGTT
ACACTTTCTCCTCAAGTGCAGCAACAGCAACAACAAGAATCTCCTCATTCTCGTTCTCAT
TCTCAGCAACAGGCCGCAGTAGACTTAGAGCAACAACAGAAGCAGCAGCAATCTTCTAGT
TCTCTATCTCCAACGTCGGTAGCTGACAATAGTGCCAAAACAAAAACTTCAACACCAGCT
CAACCAGTCCCGATCAACACGTACCGAGAAAAAAAGGAAGAAGAGCGACAACAGAAGAGG
GATGAAGAAGGATTACACCTTCTGACCTTGCTATTGCAATGTGCAGAAGCCGTATCCGCT
GATAATTTAGAAGAGGCAAATAAAATGCTATTAGAAGTATCCGAACTCTCCACACCGTTT
GGCACATCTGCACAGCGTGTTGCTGCATATTTCTCAGAAGCCATGTCAGCAAGGCTGTTG
AATTCATGCTTGGGAATATACGCAGCCCTACCAATGACCAGCGTCCCCATGCTTTACACA
CAGAAAATGGCATCCGCTTTCCAGGTGTTTAACGGAATCAGCCCCTTCATTAAATTCTCA
CATTTCACCGCCAATCAAGCTATACAAGAAGCTTTCGAGAGAGAAGACCGGGTACACATA
ATCGACCTTGATATAATGCAAGGTCTTCAATGGCCCGGTCTTTTCCACATCTTGGCTTCC
AGGCCCGGTGGACCTCCTTTTGTTCGGCTCACCGGGCTTGGAACATCCATGGATGCTCTT
GAAGCAACCGGCAAACGACTATCCGATTTTGCCGAGAGATTAGGCCTTCATTTCGAGTTT
TTACCAGTTGCTGATAAAGTTGGAAACTTGGACCCTGAGAAATTGAATGTGAGCAAGAGA
GAAGCTATAGCGGTTCATTGGTTGCAACATTCCCTTTACGATGTTACTGGCAGCGACTCT
AATACACTCTCCCTCTTGCAAAGGTTGGCTCCGAAGGTGGTGACGGTGGTGGAGCAGGAT
CTGAGCCACGCGGGTTCATTCCTAGGGAGGTTTGTAGAGGCAATACATTACTACTCAGCT
CTATTTGACTCACTGGGCGCGTGCTATGGGGAGGAGAGTGAAGAAAGACATGTGGTGGAG
CAACAACTATTGTCAAAGGAGATACGTAATGTACTAGCCGTAGGAGGTCCATCAAGGAGC
GGGGACGCGAAATTCAACAACTGGAGAGAGAAGCTTCAACAGTCTGGATTTAGATGCTTG
TCTCTTGCAGGTAATGCTGCTGCACAAGCTACTCTTTTACTCGGAATGTTCCCGTCTCAT
GGATACACTTTGGTTGAGGATAATGGAACTCTTAAGCTTGGATGGAAAGATCTTTGCTTG
TTTACTGCTTCTGCATGGAGACCTAATTCCTTGCATGCTGCACCAGGTTCTCGTCACTTC
TCTCGTCCTAATATGGATTAG