Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043338
CDS Infomation

pacid=37477715 polypeptide=PGSC0003DMP400029393 locus=PGSC0003DMG400016826 ID=PGSC0003DMT400043338.v4.03 annot-version=v4.03
Sequence

ATGGCCAAGCGAACCCTACCCATCCTCAAGCACTTCCTCACCTCCCTGTCTCCATCTCCC
TCTCCATCCCATGCCTTAACATCAGTCCGATCCGTCACCTATATGCCCCGACCCGGCGAT
GGCACCCCACGCGCCGTCACACTCATCCCCGGTGACGGGATCGGACCTCTAGTAACCGGT
GCTGTTGAACAAGTCATGGAGGCGATGCACGCTCCTGTATACTTTGAGCGTTATGATGTT
CATGGAGATATGAAGAGTATGCCTCCGGATGTGATGGATTCGATCCGGAAGAATAAGGTC
TGTTTAAAAGGAGGGTTGAAGACACCCGTGGGTGGTGGTGTTAGCTCTCTCAATGTTCAG
CTTAGGAAAGAGCTTGATCTATATGCTTCCCTTGTTCACTGCTTCAACTTGAAAGGTCTT
CCTACGCGTCATGAGAACGTTGATATTGTTGTTATTAGGGAGAATACTGAGGGGGAATAT
TCGGGATTGGAGCATGAGGTTGTTCCCGGTGTTGTAGAGAGTCTGAAGGTGATGACAAAG
TTTTGCTCAGAACGAATTGCTAAATATGCCTTTGAATATGCATACCTCAACAATCGCAAG
GTAGTGACTGCTGTGCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTTTTAGAG
TCTTGTCGAGAGATCGCAAGCAAATACCCTGGGATCAAATACAGTGAGATCATTGTGGAC
AACTGTTGCATGCAACTTGTATCAAAGCCTGAGCAATTTGATGTTATGGTCACCCCTAAT
CTCTACGGAAATCTGGTAGCAAATACAGCAGCTGGTATTGCTGGAGGCACGGGTGTTATG
CCAGGAGGTAACGTGGGGGCTGACCATGCCGTGTTTGAGCAAGGTGCTTCAGCAGGAAAT
GTAGGAAATGACAAGATACTAGAGCTAAAGAAGGCAAACCCAATTGCCTTGTTTCTTTCA
TCAGCCATGATGTTGAGACATCTGCAGTTTCCTTCATTTGCAGATAGACTAGAGACTTCA
GTGAAGCGTGTAATTGCCGAAGGTAAATACATGACCAAGGATCTTGGTGGAGACTGCACC
ACCCAAGAAATCACGGATGCTGTCATTGCAAATCTGGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029393
PEP Infomation

pacid=37477715 transcript=PGSC0003DMT400043338 locus=PGSC0003DMG400016826 ID=PGSC0003DMT400043338.v4.03 annot-version=v4.03
Sequence

MAKRTLPILKHFLTSLSPSPSPSHALTSVRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTG
AVEQVMEAMHAPVYFERYDVHGDMKSMPPDVMDSIRKNKVCLKGGLKTPVGGGVSSLNVQ
LRKELDLYASLVHCFNLKGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVMTK
FCSERIAKYAFEYAYLNNRKVVTAVHKANIMKLADGLFLESCREIASKYPGIKYSEIIVD
NCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGN
VGNDKILELKKANPIALFLSSAMMLRHLQFPSFADRLETSVKRVIAEGKYMTKDLGGDCT
TQEITDAVIANLD*

Transcript Sequence

Transcript ID

PGSC0003DMT400043338
Transcript Infomation

pacid=37477715 locus=PGSC0003DMG400016826 ID=PGSC0003DMT400043338.v4.03 annot-version=v4.03
Sequence

ATGGCCAAGCGAACCCTACCCATCCTCAAGCACTTCCTCACCTCCCTGTCTCCATCTCCC
TCTCCATCCCATGCCTTAACATCAGTCCGATCCGTCACCTATATGCCCCGACCCGGCGAT
GGCACCCCACGCGCCGTCACACTCATCCCCGGTGACGGGATCGGACCTCTAGTAACCGGT
GCTGTTGAACAAGTCATGGAGGCGATGCACGCTCCTGTATACTTTGAGCGTTATGATGTT
CATGGAGATATGAAGAGTATGCCTCCGGATGTGATGGATTCGATCCGGAAGAATAAGGTC
TGTTTAAAAGGAGGGTTGAAGACACCCGTGGGTGGTGGTGTTAGCTCTCTCAATGTTCAG
CTTAGGAAAGAGCTTGATCTATATGCTTCCCTTGTTCACTGCTTCAACTTGAAAGGTCTT
CCTACGCGTCATGAGAACGTTGATATTGTTGTTATTAGGGAGAATACTGAGGGGGAATAT
TCGGGATTGGAGCATGAGGTTGTTCCCGGTGTTGTAGAGAGTCTGAAGGTGATGACAAAG
TTTTGCTCAGAACGAATTGCTAAATATGCCTTTGAATATGCATACCTCAACAATCGCAAG
GTAGTGACTGCTGTGCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTTTTAGAG
TCTTGTCGAGAGATCGCAAGCAAATACCCTGGGATCAAATACAGTGAGATCATTGTGGAC
AACTGTTGCATGCAACTTGTATCAAAGCCTGAGCAATTTGATGTTATGGTCACCCCTAAT
CTCTACGGAAATCTGGTAGCAAATACAGCAGCTGGTATTGCTGGAGGCACGGGTGTTATG
CCAGGAGGTAACGTGGGGGCTGACCATGCCGTGTTTGAGCAAGGTGCTTCAGCAGGAAAT
GTAGGAAATGACAAGATACTAGAGCTAAAGAAGGCAAACCCAATTGCCTTGTTTCTTTCA
TCAGCCATGATGTTGAGACATCTGCAGTTTCCTTCATTTGCAGATAGACTAGAGACTTCA
GTGAAGCGTGTAATTGCCGAAGGTAAATACATGACCAAGGATCTTGGTGGAGACTGCACC
ACCCAAGAAATCACGGATGCTGTCATTGCAAATCTGGACTAA