Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043330
CDS Infomation

pacid=37480076 polypeptide=PGSC0003DMP400029391 locus=PGSC0003DMG400016824 ID=PGSC0003DMT400043330.v4.03 annot-version=v4.03
Sequence

ATGGGATGCACCAGCTCCAAGATTGATGATTTGCCGGCGGTTGCTCTCTGCCGTGAACGT
TGCTCATTCTTGGATGAAGCTATTCACTACCGTTATGCTCTTGCTGAAGCACATCTTGCT
TATCTTCACTCACTTAAAACTGTTGGACTCTCTGTTCATCATTTTTTTAAAGAAAATGTT
GAAACTTCTCATTCCCCTGTTTTTATTAAAAGTGACCCACCACCCCCTGAACCTCCCAAG
AAACTGATTCCTCCTTCTTCTGCTCCTGCTCCTGCTCCTGTTGATTCTCATTCTAGTTCT
GGTTCACATCTTCATTTTCATTCTGATTCTGATTCTGATGAAGGGTCTGGGACTGATTCT
TTACATCATCATCACTTAGATGGTACTTCCGTACCGTTTCATCAGTACGGTCAGTTTAGT
TATGGGGATCATGAAATGCTTGGTTTTGGTGGTTCTTATCCAGTTGGGGGAAATGGGGGT
GGGTTTATGCATATGAATTTCATGAGGAACCAAACGACGCCGTCTGTAACCTATGAACAA
CGGCCGGTGAGTACGGAGACTGTTCAGATGAGTGAACCCTCTTCTTCTTCTTCTTACTAC
CCTTATCCTTATGCCACTAACTATCCGGATTATGCCAATTACGGAGGGGGTTTTTATCCC
TCATCCACGCCGGCGGCGGGGATGTCATTGGCTCCTTCGAGTTCAAAACCACCTCCGCCT
CCGCCGTCTCCTCCGAGGAGTTCGCCTTGGGAATTTTTGAATCTTTTTAAGACTCTTGAG
AGTTATCCAGTGTACCCACCAAGCAGAGACTCGAGAGAGGTAAGAGAAGAGGAGGGTATA
CCTGATTTGGAAGATGTGGATTTTGAACATGAGGCTGTTAAGGAAGTTCATGAGGATCAA
AGGTTTGTAGACGAGGCTGGAACTGCAAGTGGAAGTTATTCAAAGGCAGTTGAGGAGAAT
GAGAAGGCAGCTGATTCAGAGTCCATACACCACCAGTCAAGCACAAGTTCATCCATGGAA
GATGACCCGATTGAGTACGAGGTACACGTTGTGGATAAGAAAGTGGTTGATGATGAGAAT
CGGGGAAATGTAGCTGGTTCGAAGGGTCGTAGTTTCAATAGCGATTCTGATGTTGTGAAG
GAGATTCAGGTTCAATTTGAGAGAGCTTCTGAATCAGGGAATGAGCTTGCTAAGATGCTT
GAAGTTGGAAAACTTCCCCACAACCGTAAGCACGCGACTTATCAAGGGATAGTTTCTTCC
AAGATGTTGCACGCCATTACCCCTTCATCGTCTGTACTCTCGCTACCTTCTACTTTAAAG
AACGATGCGATTGAGATTGCTGATCATGCCATTTTAGATGTAGAAGGAGATATTAGTTCA
AGGCCTAGTAACATTTCTTCCACATTGCAGAAGCTGTACCTCTGGGAGAAGAAACTGTTT
GAGGAGGTCAAGGCAGAGGAGAAGATAAGGGTGCTTCATGAAAGGAAAAGTCGAAAGCTG
AAGCAATTAACTGAAAAGGGTGCTGATTCTGACAAGATTGACATGACCAGAAAATTGGTT
ATGAGTCTCTCCTCAAAGATTAGAATTGCAATTCAGGTAGTTGATAAGGTTTCTGAGAAG
ATAAACAAATTGAGGGATGAAGAGTTGTGGCCACAACTGAACGAACTTATTCAGGGGTTA
TGTAGAATGTGGAGATCCATGCTTGAGTGCCATCGCTTCCAGTGCGTAGCCATTGGAGAA
GCAAAACGGTTAGATACCATTGCATCTCACAAACACTTCAGTGATGCTCATCTTGAAGCT
ACTCTGCAACTTGAGCATGAGCTTTTGAACTGGACTTTGAGTTTCTCTTGTTGGGTGACT
GCACAGAAGGGCTATGTGAGGGCATTGAACAGTTGGCTTATGAAGTGTCTTCTATATGTA
CCGGAAGAAACAGATGATGGAATAGTTCCCTTTTCTCCTGGCAGGATTGGTGCTCCCCCT
ATTTTTGTCATTTGTAATCATTGGTCACAAGCATTTGAAAGGGTCTCGGAAAAAGAGGTG
GTTGATTGTATGCGAGATTTTGCTACAAATGTGCTTCAGCTCTGGGAGCGAGATAAGCTG
GAATTACGCCAAAAGATGATGGTGAACAAGGATATGGAGCGACAAGTGAAGAACCTGGAT
AGGGAAGACCAGAAGATACAAAAGGGGATTCATGCACTAGACAAAAGAATCGTTCTGGTT
TCTGGGGAGGAAAATAGTCTTTCATTGAATAGGCATGTTGTTTACCAGAGCGAGACTAGC
AAAAATAGTAGCTTTCAGGTTGGTCTACAACGTATATTTGAGGCCATGGAAAGGTTTACT
GCTAACTCCTTGAAGGTATACGAGGAGCTTTTGCAACGTATTGAGGAGGATAGACTTGCT
AGAGAGCCTGAGGCTGTGTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400029391
PEP Infomation

pacid=37480076 transcript=PGSC0003DMT400043330 locus=PGSC0003DMG400016824 ID=PGSC0003DMT400043330.v4.03 annot-version=v4.03
Sequence

MGCTSSKIDDLPAVALCRERCSFLDEAIHYRYALAEAHLAYLHSLKTVGLSVHHFFKENV
ETSHSPVFIKSDPPPPEPPKKLIPPSSAPAPAPVDSHSSSGSHLHFHSDSDSDEGSGTDS
LHHHHLDGTSVPFHQYGQFSYGDHEMLGFGGSYPVGGNGGGFMHMNFMRNQTTPSVTYEQ
RPVSTETVQMSEPSSSSSYYPYPYATNYPDYANYGGGFYPSSTPAAGMSLAPSSSKPPPP
PPSPPRSSPWEFLNLFKTLESYPVYPPSRDSREVREEEGIPDLEDVDFEHEAVKEVHEDQ
RFVDEAGTASGSYSKAVEENEKAADSESIHHQSSTSSSMEDDPIEYEVHVVDKKVVDDEN
RGNVAGSKGRSFNSDSDVVKEIQVQFERASESGNELAKMLEVGKLPHNRKHATYQGIVSS
KMLHAITPSSSVLSLPSTLKNDAIEIADHAILDVEGDISSRPSNISSTLQKLYLWEKKLF
EEVKAEEKIRVLHERKSRKLKQLTEKGADSDKIDMTRKLVMSLSSKIRIAIQVVDKVSEK
INKLRDEELWPQLNELIQGLCRMWRSMLECHRFQCVAIGEAKRLDTIASHKHFSDAHLEA
TLQLEHELLNWTLSFSCWVTAQKGYVRALNSWLMKCLLYVPEETDDGIVPFSPGRIGAPP
IFVICNHWSQAFERVSEKEVVDCMRDFATNVLQLWERDKLELRQKMMVNKDMERQVKNLD
REDQKIQKGIHALDKRIVLVSGEENSLSLNRHVVYQSETSKNSSFQVGLQRIFEAMERFT
ANSLKVYEELLQRIEEDRLAREPEAVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400043330
Transcript Infomation

pacid=37480076 locus=PGSC0003DMG400016824 ID=PGSC0003DMT400043330.v4.03 annot-version=v4.03
Sequence

ATGGGATGCACCAGCTCCAAGATTGATGATTTGCCGGCGGTTGCTCTCTGCCGTGAACGT
TGCTCATTCTTGGATGAAGCTATTCACTACCGTTATGCTCTTGCTGAAGCACATCTTGCT
TATCTTCACTCACTTAAAACTGTTGGACTCTCTGTTCATCATTTTTTTAAAGAAAATGTT
GAAACTTCTCATTCCCCTGTTTTTATTAAAAGTGACCCACCACCCCCTGAACCTCCCAAG
AAACTGATTCCTCCTTCTTCTGCTCCTGCTCCTGCTCCTGTTGATTCTCATTCTAGTTCT
GGTTCACATCTTCATTTTCATTCTGATTCTGATTCTGATGAAGGGTCTGGGACTGATTCT
TTACATCATCATCACTTAGATGGTACTTCCGTACCGTTTCATCAGTACGGTCAGTTTAGT
TATGGGGATCATGAAATGCTTGGTTTTGGTGGTTCTTATCCAGTTGGGGGAAATGGGGGT
GGGTTTATGCATATGAATTTCATGAGGAACCAAACGACGCCGTCTGTAACCTATGAACAA
CGGCCGGTGAGTACGGAGACTGTTCAGATGAGTGAACCCTCTTCTTCTTCTTCTTACTAC
CCTTATCCTTATGCCACTAACTATCCGGATTATGCCAATTACGGAGGGGGTTTTTATCCC
TCATCCACGCCGGCGGCGGGGATGTCATTGGCTCCTTCGAGTTCAAAACCACCTCCGCCT
CCGCCGTCTCCTCCGAGGAGTTCGCCTTGGGAATTTTTGAATCTTTTTAAGACTCTTGAG
AGTTATCCAGTGTACCCACCAAGCAGAGACTCGAGAGAGGTAAGAGAAGAGGAGGGTATA
CCTGATTTGGAAGATGTGGATTTTGAACATGAGGCTGTTAAGGAAGTTCATGAGGATCAA
AGGTTTGTAGACGAGGCTGGAACTGCAAGTGGAAGTTATTCAAAGGCAGTTGAGGAGAAT
GAGAAGGCAGCTGATTCAGAGTCCATACACCACCAGTCAAGCACAAGTTCATCCATGGAA
GATGACCCGATTGAGTACGAGGTACACGTTGTGGATAAGAAAGTGGTTGATGATGAGAAT
CGGGGAAATGTAGCTGGTTCGAAGGGTCGTAGTTTCAATAGCGATTCTGATGTTGTGAAG
GAGATTCAGGTTCAATTTGAGAGAGCTTCTGAATCAGGGAATGAGCTTGCTAAGATGCTT
GAAGTTGGAAAACTTCCCCACAACCGTAAGCACGCGACTTATCAAGGGATAGTTTCTTCC
AAGATGTTGCACGCCATTACCCCTTCATCGTCTGTACTCTCGCTACCTTCTACTTTAAAG
AACGATGCGATTGAGATTGCTGATCATGCCATTTTAGATGTAGAAGGAGATATTAGTTCA
AGGCCTAGTAACATTTCTTCCACATTGCAGAAGCTGTACCTCTGGGAGAAGAAACTGTTT
GAGGAGGTCAAGGCAGAGGAGAAGATAAGGGTGCTTCATGAAAGGAAAAGTCGAAAGCTG
AAGCAATTAACTGAAAAGGGTGCTGATTCTGACAAGATTGACATGACCAGAAAATTGGTT
ATGAGTCTCTCCTCAAAGATTAGAATTGCAATTCAGGTAGTTGATAAGGTTTCTGAGAAG
ATAAACAAATTGAGGGATGAAGAGTTGTGGCCACAACTGAACGAACTTATTCAGGGGTTA
TGTAGAATGTGGAGATCCATGCTTGAGTGCCATCGCTTCCAGTGCGTAGCCATTGGAGAA
GCAAAACGGTTAGATACCATTGCATCTCACAAACACTTCAGTGATGCTCATCTTGAAGCT
ACTCTGCAACTTGAGCATGAGCTTTTGAACTGGACTTTGAGTTTCTCTTGTTGGGTGACT
GCACAGAAGGGCTATGTGAGGGCATTGAACAGTTGGCTTATGAAGTGTCTTCTATATGTA
CCGGAAGAAACAGATGATGGAATAGTTCCCTTTTCTCCTGGCAGGATTGGTGCTCCCCCT
ATTTTTGTCATTTGTAATCATTGGTCACAAGCATTTGAAAGGGTCTCGGAAAAAGAGGTG
GTTGATTGTATGCGAGATTTTGCTACAAATGTGCTTCAGCTCTGGGAGCGAGATAAGCTG
GAATTACGCCAAAAGATGATGGTGAACAAGGATATGGAGCGACAAGTGAAGAACCTGGAT
AGGGAAGACCAGAAGATACAAAAGGGGATTCATGCACTAGACAAAAGAATCGTTCTGGTT
TCTGGGGAGGAAAATAGTCTTTCATTGAATAGGCATGTTGTTTACCAGAGCGAGACTAGC
AAAAATAGTAGCTTTCAGGTTGGTCTACAACGTATATTTGAGGCCATGGAAAGGTTTACT
GCTAACTCCTTGAAGGTATACGAGGAGCTTTTGCAACGTATTGAGGAGGATAGACTTGCT
AGAGAGCCTGAGGCTGTGTCATAG