Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043322
CDS Infomation

pacid=37476430 polypeptide=PGSC0003DMP400029384 locus=PGSC0003DMG400016820 ID=PGSC0003DMT400043322.v4.03 annot-version=v4.03
Sequence

ATGGGCAATACATGCCGTGGATCTATTGGAGGCAAAACTTTTCAGGGCTACACTCAGCCT
GAAGATAGTTCCTGCTCCACCAATCATAACCCTTCTTCCGGCAATTCTTATTCTTCTTCT
GACAATTTTTCTCCCACCAGTAACGCTCAACAGAATAGCAATCACAAGAAGGAGCATTCT
TTGTCTCTTGTTAGTCCCAGAAAAGCTAGAATGAATCGTTCCGGGAGTAATCAGGCTTAT
TATGTAATGGGTCATATGACCCCGAATATTCGCGATCTTTATACTTTGGGAAGGAAATTA
GGACAAGGGCAGTTTGGGACTACTTATTTATGCACAGAGAATTCTACCGGTGCTGAGTAT
GCCTGTAAATCAATCTCGAAGAGGAAGTTGATTTCGAAGGAGGATGTGGAAGATGTTAGA
AGGGAAATTCAGATAATGCATCATTTGTCTGGTCATAGGAATATTGTTACTATTAAAGGG
GCTTATGAGGATCCTTTATATGTTCATATTGTCATGGAGATATGTAGTGGTGGTGAGTTG
TTCGATCGGATCATACAACGAGGACATTACAGTGAGAGAAAGGCAGCTGAATTGACTAAA
ATTATTGTTGGGGTTGTGGAGGCGTGTCATTCTCTTGGTGTTATGCATAGAGATCTCAAA
CCTGAGAATTTCTTGTTGGTTAATAAGGATAATGATTTCTCTCTCAAGGCCATTGATTTT
GGACTCTCTGTTTTCTTCAAGCCAGGACAAATATTCACAGATGTTGTTGGTAGTCCATAT
TATGTGGCTCCTGAGGTGCTTTTGAAGCATTATGGTCCTGAAGCTGATGTGTGGACAGCA
GGAGTCATACTCTACATACTGCTAAGTGGTGTGCCACCATTTTGGGCTGAAACACAGCAG
GGAATATTTGACGCAGTTCTGAAAGGGCACATTGATTTTGACTCAGATCCTTGGCCATTG
ATATCTGAGAGTGCAAAAGATCTTATCCGGAAGATGTTGTGCATGCAGCCCTCGGAGCGG
TTAACTGCTCATGAAGTATTGTGTCATCCTTGGATTTGTGAAAATGGTGTCGCTCCTGAT
AGAGCACTGGATCCTGCAGTACTTTCTCGCCTGAAACAGTTCTCTGCTATGAACAAGTTA
AAAAAGATGGCTTTGCGGGTGATTGCTGAAAGCTTGTCTGAAGAAGAGATTGCTGGTCTG
AGAGAGATGTTTAAGGCCATGGATACTGACAGTAGTGGTGCAATTACATTTGATGAACTA
AAAGCAGGGTTGAGAAAATATGGGTCTACGTTAAAGGATACGGAGATACGGGAACTTATG
GATGCGGCTGATGTGGACAATAGTGGAACTATTGACTATGGAGAATTCATTGCGGCAACT
GTTCATCTTAATAAATTGGAGCGCGAGGAACATCTCATGGCCGCATTTCAATATTTTGAC
AAGGATGGAAGTGGTTACATAACGGTTGATGAGGTCCAGCAAGCTTGTATAGAGCATAAC
ATGACAGATGTTTACTTTGAGGATATTATAAGAGAAGTCGATCAGGATAATGATGGACGA
ATTGATTATGGAGAATTTGTTGCTATGATGCAAAAAGGAAATCCGTGTATAGGGAGACGA
ACAATGCGAAATAGTCTGAATTTGAGCATGAGAGATGCACCGGGAGCTCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029384
PEP Infomation

pacid=37476430 transcript=PGSC0003DMT400043322 locus=PGSC0003DMG400016820 ID=PGSC0003DMT400043322.v4.03 annot-version=v4.03
Sequence

MGNTCRGSIGGKTFQGYTQPEDSSCSTNHNPSSGNSYSSSDNFSPTSNAQQNSNHKKEHS
LSLVSPRKARMNRSGSNQAYYVMGHMTPNIRDLYTLGRKLGQGQFGTTYLCTENSTGAEY
ACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYVHIVMEICSGGEL
FDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDNDFSLKAIDF
GLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQ
GIFDAVLKGHIDFDSDPWPLISESAKDLIRKMLCMQPSERLTAHEVLCHPWICENGVAPD
RALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFKAMDTDSSGAITFDEL
KAGLRKYGSTLKDTEIRELMDAADVDNSGTIDYGEFIAATVHLNKLEREEHLMAAFQYFD
KDGSGYITVDEVQQACIEHNMTDVYFEDIIREVDQDNDGRIDYGEFVAMMQKGNPCIGRR
TMRNSLNLSMRDAPGAQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400043322
Transcript Infomation

pacid=37476430 locus=PGSC0003DMG400016820 ID=PGSC0003DMT400043322.v4.03 annot-version=v4.03
Sequence

ATGGGCAATACATGCCGTGGATCTATTGGAGGCAAAACTTTTCAGGGCTACACTCAGCCT
GAAGATAGTTCCTGCTCCACCAATCATAACCCTTCTTCCGGCAATTCTTATTCTTCTTCT
GACAATTTTTCTCCCACCAGTAACGCTCAACAGAATAGCAATCACAAGAAGGAGCATTCT
TTGTCTCTTGTTAGTCCCAGAAAAGCTAGAATGAATCGTTCCGGGAGTAATCAGGCTTAT
TATGTAATGGGTCATATGACCCCGAATATTCGCGATCTTTATACTTTGGGAAGGAAATTA
GGACAAGGGCAGTTTGGGACTACTTATTTATGCACAGAGAATTCTACCGGTGCTGAGTAT
GCCTGTAAATCAATCTCGAAGAGGAAGTTGATTTCGAAGGAGGATGTGGAAGATGTTAGA
AGGGAAATTCAGATAATGCATCATTTGTCTGGTCATAGGAATATTGTTACTATTAAAGGG
GCTTATGAGGATCCTTTATATGTTCATATTGTCATGGAGATATGTAGTGGTGGTGAGTTG
TTCGATCGGATCATACAACGAGGACATTACAGTGAGAGAAAGGCAGCTGAATTGACTAAA
ATTATTGTTGGGGTTGTGGAGGCGTGTCATTCTCTTGGTGTTATGCATAGAGATCTCAAA
CCTGAGAATTTCTTGTTGGTTAATAAGGATAATGATTTCTCTCTCAAGGCCATTGATTTT
GGACTCTCTGTTTTCTTCAAGCCAGGACAAATATTCACAGATGTTGTTGGTAGTCCATAT
TATGTGGCTCCTGAGGTGCTTTTGAAGCATTATGGTCCTGAAGCTGATGTGTGGACAGCA
GGAGTCATACTCTACATACTGCTAAGTGGTGTGCCACCATTTTGGGCTGAAACACAGCAG
GGAATATTTGACGCAGTTCTGAAAGGGCACATTGATTTTGACTCAGATCCTTGGCCATTG
ATATCTGAGAGTGCAAAAGATCTTATCCGGAAGATGTTGTGCATGCAGCCCTCGGAGCGG
TTAACTGCTCATGAAGTATTGTGTCATCCTTGGATTTGTGAAAATGGTGTCGCTCCTGAT
AGAGCACTGGATCCTGCAGTACTTTCTCGCCTGAAACAGTTCTCTGCTATGAACAAGTTA
AAAAAGATGGCTTTGCGGGTGATTGCTGAAAGCTTGTCTGAAGAAGAGATTGCTGGTCTG
AGAGAGATGTTTAAGGCCATGGATACTGACAGTAGTGGTGCAATTACATTTGATGAACTA
AAAGCAGGGTTGAGAAAATATGGGTCTACGTTAAAGGATACGGAGATACGGGAACTTATG
GATGCGGCTGATGTGGACAATAGTGGAACTATTGACTATGGAGAATTCATTGCGGCAACT
GTTCATCTTAATAAATTGGAGCGCGAGGAACATCTCATGGCCGCATTTCAATATTTTGAC
AAGGATGGAAGTGGTTACATAACGGTTGATGAGGTCCAGCAAGCTTGTATAGAGCATAAC
ATGACAGATGTTTACTTTGAGGATATTATAAGAGAAGTCGATCAGGATAATGATGGACGA
ATTGATTATGGAGAATTTGTTGCTATGATGCAAAAAGGAAATCCGTGTATAGGGAGACGA
ACAATGCGAAATAGTCTGAATTTGAGCATGAGAGATGCACCGGGAGCTCAGTAG