Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043255
CDS Infomation

pacid=37445063 polypeptide=PGSC0003DMP400029338 locus=PGSC0003DMG400016794 ID=PGSC0003DMT400043255.v4.03 annot-version=v4.03
Sequence

ATGGGAAAATTTGAGGAGGAGGTTAGGCAGATGAAAGAGGTAGCTCATGAAGCTCAGGCA
ATGGATTTAGTATACAATTTCAAGAAAAGGGTTCATGAACTAGAAGCTGAAGTAGCAAAT
AGACGATTATCGGAGTCTAGAATATTCGATTCATTGGCCTCACAGACAAGGGAATTTGAG
CAAACTAAGATTGAACTTGAAGAATCCAAAGTTGAGATATCTTTACTTCATGAAGAGATT
GAATCACTAGTGTCTTCATCCGAGCAAAATAACTGGCGTTGTGATGGTTCTTGTAGCGGA
AAGATTGCTTTAGAGAAGGAACTCGGATGCCTCAGGTTTGAACTTGGATTAGCGAAGGCG
AATTTGGCTATGATCCAAGAAAGAGAGAGGTTTGCTTCATCAAAAGCTAATGCATTGAGT
GATGAGATGCATTTGGTTAGAAATGAACTTAAATTTGCAACTTGTGCAGAAGAAAAAAGC
CAAAAGGCCTTGGATGATTTAGCGTTAGCGTTGAAAGAAATTGCTGCTGAAGCTTATGAG
GCCAAGGAGAAACTTAGTGCTTCTCAATTAGAACTCGAACAAGTAAAAGATGAGGCAGGA
CAATTGAAACATATGGTTAGAAACGCCGAGGCTAGGTATCAAAAACTTTTGAATGAGGCG
AAAAAGGAAACTGAACTACATAGAGAAACATCAGACAGATTAAGGCTGGAGTTTGATGAG
TCACGTTTGGCTGAAAATGAGACGAGGTACATAACTTGTATAAAGAAAGCTGAAGAAGAA
AACAAGCTAGCTCAGGATGAGGCTGCTACACTCGCGGAGTCTCTTAAAGCAGCTGAGCGT
ATTACTAGAGCAGCAAAGAGAGAAGTTTACAAATTGAAGGGCATATTGAAACAGGCTATA
AATGAAGCTGACGCTGCAAATACTGCTGCTGGCCTAGCTAGAGATGAAAACATTCAACTC
AAGGATTCTAAAGCTGAAAAGGAGGAATCAATTCGTCTTCTCACTCAAGAGAACGAACGA
CTTGGGACTAATGAAGTTGCAGCTCAAGAAAACGTCAAGAAGTTAAAAAGGTTGCTCTCT
TCGTCAGCACTCAAAACCAAGGATAAGGAGCAAGAAGAGGAACATAATGTGGATCCCCAT
ATCAAGAAAACTTCCAGCAGTGTAAATTTGCAACAAGAACAAGGAAATTTAGAAGCCAAA
ATCCAAGATGAGAATCTCAAAAAGGCCAAGGCACTTAAGGACACAATATTTGAGATAAAT
GAATCACCAAAATCAGAGCTCCATATACCAAAACAAGTATCTCATCATCGGAGAGCATCC
TCGTTTGCCTTCTCAGATGATAGAGGAACACTAAAAACAAAAGACTTAAGCATGTCTTTG
AGCAAATCTTCGTCATCACTCAACACCAAGGATAAGGAACAAGAAGAGGAACAATATGAG
GAACTCCAAGTTCCGAAAAAGCTCAAGTTGCAACAAGAACAAGAAGATTTGAAAGAGAAA
ATCCAAGATAAGGATCCTGAAAAGGCTGAGACACTTGAGAGGTCAATAATTGAATCACCA
AAACCTGAGGCAGATCCCCATACACCAAAAAAGGTTCCTCTTCATCGGATATCATCCTCG
TCTTCCTCCTCAGATGATGGAGGATCACTAAAAACAGAAGACTCTGTTAGTGATAGAAGT
CTTATCAGGAGGAAAAGAACGTTGTTTCGAAAAGTTGGTGATCTCATAAGGAGGAAAAGT
TTTCATAAAACCATCCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029338
PEP Infomation

pacid=37445063 transcript=PGSC0003DMT400043255 locus=PGSC0003DMG400016794 ID=PGSC0003DMT400043255.v4.03 annot-version=v4.03
Sequence

MGKFEEEVRQMKEVAHEAQAMDLVYNFKKRVHELEAEVANRRLSESRIFDSLASQTREFE
QTKIELEESKVEISLLHEEIESLVSSSEQNNWRCDGSCSGKIALEKELGCLRFELGLAKA
NLAMIQERERFASSKANALSDEMHLVRNELKFATCAEEKSQKALDDLALALKEIAAEAYE
AKEKLSASQLELEQVKDEAGQLKHMVRNAEARYQKLLNEAKKETELHRETSDRLRLEFDE
SRLAENETRYITCIKKAEEENKLAQDEAATLAESLKAAERITRAAKREVYKLKGILKQAI
NEADAANTAAGLARDENIQLKDSKAEKEESIRLLTQENERLGTNEVAAQENVKKLKRLLS
SSALKTKDKEQEEEHNVDPHIKKTSSSVNLQQEQGNLEAKIQDENLKKAKALKDTIFEIN
ESPKSELHIPKQVSHHRRASSFAFSDDRGTLKTKDLSMSLSKSSSSLNTKDKEQEEEQYE
ELQVPKKLKLQQEQEDLKEKIQDKDPEKAETLERSIIESPKPEADPHTPKKVPLHRISSS
SSSSDDGGSLKTEDSVSDRSLIRRKRTLFRKVGDLIRRKSFHKTIH*

Transcript Sequence

Transcript ID

PGSC0003DMT400043255
Transcript Infomation

pacid=37445063 locus=PGSC0003DMG400016794 ID=PGSC0003DMT400043255.v4.03 annot-version=v4.03
Sequence

ATGGGAAAATTTGAGGAGGAGGTTAGGCAGATGAAAGAGGTAGCTCATGAAGCTCAGGCA
ATGGATTTAGTATACAATTTCAAGAAAAGGGTTCATGAACTAGAAGCTGAAGTAGCAAAT
AGACGATTATCGGAGTCTAGAATATTCGATTCATTGGCCTCACAGACAAGGGAATTTGAG
CAAACTAAGATTGAACTTGAAGAATCCAAAGTTGAGATATCTTTACTTCATGAAGAGATT
GAATCACTAGTGTCTTCATCCGAGCAAAATAACTGGCGTTGTGATGGTTCTTGTAGCGGA
AAGATTGCTTTAGAGAAGGAACTCGGATGCCTCAGGTTTGAACTTGGATTAGCGAAGGCG
AATTTGGCTATGATCCAAGAAAGAGAGAGGTTTGCTTCATCAAAAGCTAATGCATTGAGT
GATGAGATGCATTTGGTTAGAAATGAACTTAAATTTGCAACTTGTGCAGAAGAAAAAAGC
CAAAAGGCCTTGGATGATTTAGCGTTAGCGTTGAAAGAAATTGCTGCTGAAGCTTATGAG
GCCAAGGAGAAACTTAGTGCTTCTCAATTAGAACTCGAACAAGTAAAAGATGAGGCAGGA
CAATTGAAACATATGGTTAGAAACGCCGAGGCTAGGTATCAAAAACTTTTGAATGAGGCG
AAAAAGGAAACTGAACTACATAGAGAAACATCAGACAGATTAAGGCTGGAGTTTGATGAG
TCACGTTTGGCTGAAAATGAGACGAGGTACATAACTTGTATAAAGAAAGCTGAAGAAGAA
AACAAGCTAGCTCAGGATGAGGCTGCTACACTCGCGGAGTCTCTTAAAGCAGCTGAGCGT
ATTACTAGAGCAGCAAAGAGAGAAGTTTACAAATTGAAGGGCATATTGAAACAGGCTATA
AATGAAGCTGACGCTGCAAATACTGCTGCTGGCCTAGCTAGAGATGAAAACATTCAACTC
AAGGATTCTAAAGCTGAAAAGGAGGAATCAATTCGTCTTCTCACTCAAGAGAACGAACGA
CTTGGGACTAATGAAGTTGCAGCTCAAGAAAACGTCAAGAAGTTAAAAAGGTTGCTCTCT
TCGTCAGCACTCAAAACCAAGGATAAGGAGCAAGAAGAGGAACATAATGTGGATCCCCAT
ATCAAGAAAACTTCCAGCAGTGTAAATTTGCAACAAGAACAAGGAAATTTAGAAGCCAAA
ATCCAAGATGAGAATCTCAAAAAGGCCAAGGCACTTAAGGACACAATATTTGAGATAAAT
GAATCACCAAAATCAGAGCTCCATATACCAAAACAAGTATCTCATCATCGGAGAGCATCC
TCGTTTGCCTTCTCAGATGATAGAGGAACACTAAAAACAAAAGACTTAAGCATGTCTTTG
AGCAAATCTTCGTCATCACTCAACACCAAGGATAAGGAACAAGAAGAGGAACAATATGAG
GAACTCCAAGTTCCGAAAAAGCTCAAGTTGCAACAAGAACAAGAAGATTTGAAAGAGAAA
ATCCAAGATAAGGATCCTGAAAAGGCTGAGACACTTGAGAGGTCAATAATTGAATCACCA
AAACCTGAGGCAGATCCCCATACACCAAAAAAGGTTCCTCTTCATCGGATATCATCCTCG
TCTTCCTCCTCAGATGATGGAGGATCACTAAAAACAGAAGACTCTGTTAGTGATAGAAGT
CTTATCAGGAGGAAAAGAACGTTGTTTCGAAAAGTTGGTGATCTCATAAGGAGGAAAAGT
TTTCATAAAACCATCCACTGA