Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043235
CDS Infomation

pacid=37450410 polypeptide=PGSC0003DMP400029323 locus=PGSC0003DMG400016781 ID=PGSC0003DMT400043235.v4.03 annot-version=v4.03
Sequence

ATGAGTTACAACAACGATCCGTACATAGATGAGGAAGGAGAGGCATTGGTGGATTTCGAT
GAGGATGTCCGATCAGATAACGAGCAACAGGAACAATTCCTTGGTGACAATCTGGACGTT
GATGATGCATGGAATCAGAGACAGCGAGAACGGTCACCAACCCCGGTATATGATGATCTT
AACAAGTCTAAGCCCAGGAAGCGGTTGATTAAGAAATCTTCGGCTAGAGAGAACACACCA
GATATTGGGCTAGGAGATGAGGAGGATGCTTATGGTGGTGCTGCTGATGATGACATGACT
GGCAATGTGCGTGATGAGTTGGACGGCGGTGGTCCTTCATCGTCCTCTGCCGGTGGTGGA
AAGAGGAAGAGGTTTGGCATGGAGTTTAGTGAAGAGAAGAGGAAGGAGAAGAAGGGGAGA
GAGAAAGTAGAGAAGAAATTTAAGTTGAGGAAAAATGGGGGTTACTCTGGAGGAAGCAGG
TTAAAGGACCAGGAGGGGGATCGGGAGATGAAGGAGATGTGGGATACCATTGCTGGTGGT
GACTCTGAGGATGACCAAGAAGGTCCGAAGAATGCCGATGATGATAACTTCATTGATGAT
AGTGGTGTGGATCCAGCTGACAGGTATGGAAGCGACAATGAACCACGGTCTCCCAGCAAT
GCTCCACAGGCTGAAGAAGGGGAAGAGGATGACGAAATCAAGCAGCTCTTCAAGGGAGGC
AAGAAGAAAAAGAAAACTGAAAAGAGTGCAGCAGAAATTGCATTGCTAGTAGAGAATGTT
ATGGCTGAGCTGGAAGTTGTTGCAGAAGAGGATGCCGAGCTGAATAGACATTCCAAACCT
GCTATAAATAAACTAAAAAAGCTCCCTCTTCTCATAGATGTCCTGTCCAAGAAGCAACTT
CAGCAAGAATTTTTAGATCATGGAGTGTTGACTCTTTTGAGGACTTGGCTTGAACCCCTT
CCAGATGGAAGCCTGCCCAACATAAACATTCGTGCTGCAATCCTAAAGATCCTTACTGAT
TATCCAATTGATCTTGAGCAGTATGATAGAAGAGAGATGTTGAAGAAGAGTGGTCTTGGA
AAGGTTATTATGTTTCTCTCGAAGTCAGATGAGGAGACTACATCTAACAGGAAACTTGCT
AAGGATTTGGTTGACAAATGGAGTCGACCAATATTCAACAAGAGTACACGGTTTGAAGAC
ATGAGAAATCTGGAGGATGAGAGAGCTGCTCAATACAGGCGGCCCTTGAAAAAACCCATG
AATAAAGCATCAGGAATGGAATCCAGAGACGATGACCTTGACTTGGCTGGATATTCACAA
GGCCAAAAGTCTGGTCAGTCATCTGGTAGGCAACTTACATCAAGGCCTGAAGCAATGTCA
ATGGATTTTGTGGTGCGTCCACAGTCTAAGATTGATCCTGACGAAGTTAGGGCCAGGGCT
AGAGCAATGGTTCAAGACCAGCGCCGAATGAAGATGAATAAGAAACTGCAGCAGTTAAAA
GCTCCAAAAAAGAAGAAACTCCAAGCCACAAAACTCAGTGTGGAGGGTCGTGGCATGGTG
AAGTATCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029323
PEP Infomation

pacid=37450410 transcript=PGSC0003DMT400043235 locus=PGSC0003DMG400016781 ID=PGSC0003DMT400043235.v4.03 annot-version=v4.03
Sequence

MSYNNDPYIDEEGEALVDFDEDVRSDNEQQEQFLGDNLDVDDAWNQRQRERSPTPVYDDL
NKSKPRKRLIKKSSARENTPDIGLGDEEDAYGGAADDDMTGNVRDELDGGGPSSSSAGGG
KRKRFGMEFSEEKRKEKKGREKVEKKFKLRKNGGYSGGSRLKDQEGDREMKEMWDTIAGG
DSEDDQEGPKNADDDNFIDDSGVDPADRYGSDNEPRSPSNAPQAEEGEEDDEIKQLFKGG
KKKKKTEKSAAEIALLVENVMAELEVVAEEDAELNRHSKPAINKLKKLPLLIDVLSKKQL
QQEFLDHGVLTLLRTWLEPLPDGSLPNINIRAAILKILTDYPIDLEQYDRREMLKKSGLG
KVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNKSTRFEDMRNLEDERAAQYRRPLKKPM
NKASGMESRDDDLDLAGYSQGQKSGQSSGRQLTSRPEAMSMDFVVRPQSKIDPDEVRARA
RAMVQDQRRMKMNKKLQQLKAPKKKKLQATKLSVEGRGMVKYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400043235
Transcript Infomation

pacid=37450410 locus=PGSC0003DMG400016781 ID=PGSC0003DMT400043235.v4.03 annot-version=v4.03
Sequence

ATGAGTTACAACAACGATCCGTACATAGATGAGGAAGGAGAGGCATTGGTGGATTTCGAT
GAGGATGTCCGATCAGATAACGAGCAACAGGAACAATTCCTTGGTGACAATCTGGACGTT
GATGATGCATGGAATCAGAGACAGCGAGAACGGTCACCAACCCCGGTATATGATGATCTT
AACAAGTCTAAGCCCAGGAAGCGGTTGATTAAGAAATCTTCGGCTAGAGAGAACACACCA
GATATTGGGCTAGGAGATGAGGAGGATGCTTATGGTGGTGCTGCTGATGATGACATGACT
GGCAATGTGCGTGATGAGTTGGACGGCGGTGGTCCTTCATCGTCCTCTGCCGGTGGTGGA
AAGAGGAAGAGGTTTGGCATGGAGTTTAGTGAAGAGAAGAGGAAGGAGAAGAAGGGGAGA
GAGAAAGTAGAGAAGAAATTTAAGTTGAGGAAAAATGGGGGTTACTCTGGAGGAAGCAGG
TTAAAGGACCAGGAGGGGGATCGGGAGATGAAGGAGATGTGGGATACCATTGCTGGTGGT
GACTCTGAGGATGACCAAGAAGGTCCGAAGAATGCCGATGATGATAACTTCATTGATGAT
AGTGGTGTGGATCCAGCTGACAGGTATGGAAGCGACAATGAACCACGGTCTCCCAGCAAT
GCTCCACAGGCTGAAGAAGGGGAAGAGGATGACGAAATCAAGCAGCTCTTCAAGGGAGGC
AAGAAGAAAAAGAAAACTGAAAAGAGTGCAGCAGAAATTGCATTGCTAGTAGAGAATGTT
ATGGCTGAGCTGGAAGTTGTTGCAGAAGAGGATGCCGAGCTGAATAGACATTCCAAACCT
GCTATAAATAAACTAAAAAAGCTCCCTCTTCTCATAGATGTCCTGTCCAAGAAGCAACTT
CAGCAAGAATTTTTAGATCATGGAGTGTTGACTCTTTTGAGGACTTGGCTTGAACCCCTT
CCAGATGGAAGCCTGCCCAACATAAACATTCGTGCTGCAATCCTAAAGATCCTTACTGAT
TATCCAATTGATCTTGAGCAGTATGATAGAAGAGAGATGTTGAAGAAGAGTGGTCTTGGA
AAGGTTATTATGTTTCTCTCGAAGTCAGATGAGGAGACTACATCTAACAGGAAACTTGCT
AAGGATTTGGTTGACAAATGGAGTCGACCAATATTCAACAAGAGTACACGGTTTGAAGAC
ATGAGAAATCTGGAGGATGAGAGAGCTGCTCAATACAGGCGGCCCTTGAAAAAACCCATG
AATAAAGCATCAGGAATGGAATCCAGAGACGATGACCTTGACTTGGCTGGATATTCACAA
GGCCAAAAGTCTGGTCAGTCATCTGGTAGGCAACTTACATCAAGGCCTGAAGCAATGTCA
ATGGATTTTGTGGTGCGTCCACAGTCTAAGATTGATCCTGACGAAGTTAGGGCCAGGGCT
AGAGCAATGGTTCAAGACCAGCGCCGAATGAAGATGAATAAGAAACTGCAGCAGTTAAAA
GCTCCAAAAAAGAAGAAACTCCAAGCCACAAAACTCAGTGTGGAGGGTCGTGGCATGGTG
AAGTATCTCTAG