Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043228
CDS Infomation

pacid=37453296 polypeptide=PGSC0003DMP400029319 locus=PGSC0003DMG400016778 ID=PGSC0003DMT400043228.v4.03 annot-version=v4.03
Sequence

ATGGAATTTCCCATCATTGTCTTGTTCATCTCACTATTTTTCACTTGGCTCTTCATCAAA
CTAACTAAATCCACGAAGAAGCTGCTACCACCTGGTCCTACTGGCCTTCCAATAATCGGC
TCACTCCTCCAACTCGGCTCAAAACCCAACCAATCACTAGCCGAGCTAGCCAAAATCCAC
GGCCCTCTCATGACTCTAAAGCTCGGCTCGATCACCACAGTTATAGCTTCCTCCCCCGAA
ACAGCCAAAGAAATCCTCCAAAAACACGACAAAACATTATCGGCCCGCATGGTTCCCGAT
GCGGTCACATCCCAACCCAATCCAGAAGCCACGTTGGCATGGGTTCAGTCCGACAACATG
TGGAGGAACAAGAGAAGAATATTGAACACGCAAATGTTCACTAATCAAAAACTCGATTCG
CTACAACAACTCCGCCACAAAAAAGCTGAACAACTTGTGTGTCATATACGAAAACTATGT
GAAAATGGCTCCTCCGTGGATATAGGACGCGTGGCGTTCGCGACCATGCTGAATTTAGTG
TCGCGCACTATTTTCTCGATTGATTTGGTAGATCCGGAATCTGACATGGCTCAAGAGTTT
AAGGATTTGGTTTGGACAATCAATGAATATGCTGGTAAGCCTAATTTGTCTGATTATTTT
CCGGTTCTAAAGTGGTTAGATTTGCAAGGGGTGAGGCGTCATGTAAGACCAGCGTACATA
AGGTTGCATCAGATATTTGATCAACTTATTGAGAAGAGATTAGATGATAGAGCGTCTACT
CGGAAGATGAAGGTAGCTGGAGATTTTTTGGATGTACTTCTTGATCAATGTGAAGATAAA
GGGTCTGGATTTGATCGCAAAACTATCAAGCCAATTATCGTCGATTTATTCGTTGCTGGA
AGTGATACATCGGCCATAACAACAGAATGGGCAATGACAGAACTTCTTCGAAAACCTGAA
GAACTCAACAAAGTACGACAAGAAATTATCCAACAAATTGGCACAGAAAGGGCAGTTAAA
GAATCAGACATGGACAAACTCCCATACCTTCAAGCAGTTGTAAAAGAAACCATGAGACTT
CATCCAGCAGCTCCATTACTCTTACCTCACAAAGCCCAACACGACGTACAAGTGTTGGGC
TTTACCGTACCCAAGGACAGTCAGATTTTCGTGAATGCTTGGGCTATTGGAAGAGATCCC
AAGTATTGGGAAAAACCACTAGAGTTTCTGCCTGAAAGATTCATGGAATCTAGTGTGGAT
TACAAAGGTAGGGACTTTGAGTTTATACCATTTGGCGCGGGGAGGAGGATTTGTCCAGGA
ATGCCGTTGGCTATAAGAATGGTGAATTTGATGTTGGCTTCGATGATTCAACCATTTAAT
TGGAAGTTACCAGATGGAATGGCGCGGGAGGAATTGGACATGGAGGAACAGTTTGGAGTT
ACCTTAAAGAAGGCTATTCCTCTTGTTGCAATTCCTTGTATGAAAGAAAATAAGGTTATA
TTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029319
PEP Infomation

pacid=37453296 transcript=PGSC0003DMT400043228 locus=PGSC0003DMG400016778 ID=PGSC0003DMT400043228.v4.03 annot-version=v4.03
Sequence

MEFPIIVLFISLFFTWLFIKLTKSTKKLLPPGPTGLPIIGSLLQLGSKPNQSLAELAKIH
GPLMTLKLGSITTVIASSPETAKEILQKHDKTLSARMVPDAVTSQPNPEATLAWVQSDNM
WRNKRRILNTQMFTNQKLDSLQQLRHKKAEQLVCHIRKLCENGSSVDIGRVAFATMLNLV
SRTIFSIDLVDPESDMAQEFKDLVWTINEYAGKPNLSDYFPVLKWLDLQGVRRHVRPAYI
RLHQIFDQLIEKRLDDRASTRKMKVAGDFLDVLLDQCEDKGSGFDRKTIKPIIVDLFVAG
SDTSAITTEWAMTELLRKPEELNKVRQEIIQQIGTERAVKESDMDKLPYLQAVVKETMRL
HPAAPLLLPHKAQHDVQVLGFTVPKDSQIFVNAWAIGRDPKYWEKPLEFLPERFMESSVD
YKGRDFEFIPFGAGRRICPGMPLAIRMVNLMLASMIQPFNWKLPDGMAREELDMEEQFGV
TLKKAIPLVAIPCMKENKVIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400043228
Transcript Infomation

pacid=37453296 locus=PGSC0003DMG400016778 ID=PGSC0003DMT400043228.v4.03 annot-version=v4.03
Sequence

ATGGAATTTCCCATCATTGTCTTGTTCATCTCACTATTTTTCACTTGGCTCTTCATCAAA
CTAACTAAATCCACGAAGAAGCTGCTACCACCTGGTCCTACTGGCCTTCCAATAATCGGC
TCACTCCTCCAACTCGGCTCAAAACCCAACCAATCACTAGCCGAGCTAGCCAAAATCCAC
GGCCCTCTCATGACTCTAAAGCTCGGCTCGATCACCACAGTTATAGCTTCCTCCCCCGAA
ACAGCCAAAGAAATCCTCCAAAAACACGACAAAACATTATCGGCCCGCATGGTTCCCGAT
GCGGTCACATCCCAACCCAATCCAGAAGCCACGTTGGCATGGGTTCAGTCCGACAACATG
TGGAGGAACAAGAGAAGAATATTGAACACGCAAATGTTCACTAATCAAAAACTCGATTCG
CTACAACAACTCCGCCACAAAAAAGCTGAACAACTTGTGTGTCATATACGAAAACTATGT
GAAAATGGCTCCTCCGTGGATATAGGACGCGTGGCGTTCGCGACCATGCTGAATTTAGTG
TCGCGCACTATTTTCTCGATTGATTTGGTAGATCCGGAATCTGACATGGCTCAAGAGTTT
AAGGATTTGGTTTGGACAATCAATGAATATGCTGGTAAGCCTAATTTGTCTGATTATTTT
CCGGTTCTAAAGTGGTTAGATTTGCAAGGGGTGAGGCGTCATGTAAGACCAGCGTACATA
AGGTTGCATCAGATATTTGATCAACTTATTGAGAAGAGATTAGATGATAGAGCGTCTACT
CGGAAGATGAAGGTAGCTGGAGATTTTTTGGATGTACTTCTTGATCAATGTGAAGATAAA
GGGTCTGGATTTGATCGCAAAACTATCAAGCCAATTATCGTCGATTTATTCGTTGCTGGA
AGTGATACATCGGCCATAACAACAGAATGGGCAATGACAGAACTTCTTCGAAAACCTGAA
GAACTCAACAAAGTACGACAAGAAATTATCCAACAAATTGGCACAGAAAGGGCAGTTAAA
GAATCAGACATGGACAAACTCCCATACCTTCAAGCAGTTGTAAAAGAAACCATGAGACTT
CATCCAGCAGCTCCATTACTCTTACCTCACAAAGCCCAACACGACGTACAAGTGTTGGGC
TTTACCGTACCCAAGGACAGTCAGATTTTCGTGAATGCTTGGGCTATTGGAAGAGATCCC
AAGTATTGGGAAAAACCACTAGAGTTTCTGCCTGAAAGATTCATGGAATCTAGTGTGGAT
TACAAAGGTAGGGACTTTGAGTTTATACCATTTGGCGCGGGGAGGAGGATTTGTCCAGGA
ATGCCGTTGGCTATAAGAATGGTGAATTTGATGTTGGCTTCGATGATTCAACCATTTAAT
TGGAAGTTACCAGATGGAATGGCGCGGGAGGAATTGGACATGGAGGAACAGTTTGGAGTT
ACCTTAAAGAAGGCTATTCCTCTTGTTGCAATTCCTTGTATGAAAGAAAATAAGGTTATA
TTTTAA