Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043221
CDS Infomation

pacid=37451108 polypeptide=PGSC0003DMP400029314 locus=PGSC0003DMG400016775 ID=PGSC0003DMT400043221.v4.03 annot-version=v4.03
Sequence

ATGATCAAGCTTCCAGAGATAGACTTTTTTCATGAAGATCTAAAGTCAGGCACACTTGTA
TGGAACCAAGTGAAAAGCCAAGTTCACAAAGCACTAGTAGAATATGGTTGTTTTGAAGCT
TCCTTTGATAAAATTTCAATACACCTTAAAAAATCTATTTTTGAAGTCTCACAAGAGCTT
TTTGATCTCCCTTTACAAACCAAACTTAAAAACATTTCAACCAGACCTCTTCATGGCTAC
ATTGGACCGTGTCCTCAAATTCCACTCTATGAAAGCTTGTGTATTGAAGATGCTAACATC
CACAATAAAGCTGAAAAATTCACTCAAACTCTATGGCCCCAAGGAAAATCTTCTTTTTGT
AAAACTATTCAATCATATTCAGAGAAACTATCAGAATTAGACCAGATAGTAAATAGAATG
ATTTTGGAGAGTTTGGGCATGGAAAAGTACATGGATGAGCATATGAATTCGACCAACTAC
CTTCTTCGATTGATGAAGTATAAAGCACCTCAAAGTAGTGAGACTGAAATGGGAATGAAT
GTTCACACGGACACGAGCAATCTTACAATACTGTACCAAAATCAGGTAAACGGTCTTCAA
ATTTTAACCAAAGATGGGCAATGGATCAATGCTGATCCTACACCAGACACTTTCATTGTC
ATGATTGGAGACCCACTACATGCATGGACAAATGGTCGGTTGCATGCACCATATCATAGA
GTGATTATGAGAGGAAAAGAAGCAAGATACTCAATTGGTTTTTTTTCAAGACCTAAAGCT
GGACACATAATAAAGACACCAAAAGAGCTGGTAGATGAAGATCATCCTTTACTCTTTAAG
CCATTTGTCCATGCTGAATACCTTGATTTCTGCTACCGTGCTTTCAACAACACTAAAGAA
GGCATGGGATGTGAATCTATTCTGAAGACCTATTATGGTGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029314
PEP Infomation

pacid=37451108 transcript=PGSC0003DMT400043221 locus=PGSC0003DMG400016775 ID=PGSC0003DMT400043221.v4.03 annot-version=v4.03
Sequence

MIKLPEIDFFHEDLKSGTLVWNQVKSQVHKALVEYGCFEASFDKISIHLKKSIFEVSQEL
FDLPLQTKLKNISTRPLHGYIGPCPQIPLYESLCIEDANIHNKAEKFTQTLWPQGKSSFC
KTIQSYSEKLSELDQIVNRMILESLGMEKYMDEHMNSTNYLLRLMKYKAPQSSETEMGMN
VHTDTSNLTILYQNQVNGLQILTKDGQWINADPTPDTFIVMIGDPLHAWTNGRLHAPYHR
VIMRGKEARYSIGFFSRPKAGHIIKTPKELVDEDHPLLFKPFVHAEYLDFCYRAFNNTKE
GMGCESILKTYYGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400043221
Transcript Infomation

pacid=37451108 locus=PGSC0003DMG400016775 ID=PGSC0003DMT400043221.v4.03 annot-version=v4.03
Sequence

ATGATCAAGCTTCCAGAGATAGACTTTTTTCATGAAGATCTAAAGTCAGGCACACTTGTA
TGGAACCAAGTGAAAAGCCAAGTTCACAAAGCACTAGTAGAATATGGTTGTTTTGAAGCT
TCCTTTGATAAAATTTCAATACACCTTAAAAAATCTATTTTTGAAGTCTCACAAGAGCTT
TTTGATCTCCCTTTACAAACCAAACTTAAAAACATTTCAACCAGACCTCTTCATGGCTAC
ATTGGACCGTGTCCTCAAATTCCACTCTATGAAAGCTTGTGTATTGAAGATGCTAACATC
CACAATAAAGCTGAAAAATTCACTCAAACTCTATGGCCCCAAGGAAAATCTTCTTTTTGT
AAAACTATTCAATCATATTCAGAGAAACTATCAGAATTAGACCAGATAGTAAATAGAATG
ATTTTGGAGAGTTTGGGCATGGAAAAGTACATGGATGAGCATATGAATTCGACCAACTAC
CTTCTTCGATTGATGAAGTATAAAGCACCTCAAAGTAGTGAGACTGAAATGGGAATGAAT
GTTCACACGGACACGAGCAATCTTACAATACTGTACCAAAATCAGGTAAACGGTCTTCAA
ATTTTAACCAAAGATGGGCAATGGATCAATGCTGATCCTACACCAGACACTTTCATTGTC
ATGATTGGAGACCCACTACATGCATGGACAAATGGTCGGTTGCATGCACCATATCATAGA
GTGATTATGAGAGGAAAAGAAGCAAGATACTCAATTGGTTTTTTTTCAAGACCTAAAGCT
GGACACATAATAAAGACACCAAAAGAGCTGGTAGATGAAGATCATCCTTTACTCTTTAAG
CCATTTGTCCATGCTGAATACCTTGATTTCTGCTACCGTGCTTTCAACAACACTAAAGAA
GGCATGGGATGTGAATCTATTCTGAAGACCTATTATGGTGTTTAA