Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043204
CDS Infomation

pacid=37453221 polypeptide=PGSC0003DMP400029302 locus=PGSC0003DMG400016769 ID=PGSC0003DMT400043204.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTTCAAGTTTCTCTTTTCCCACTTCATCTTCTTCATTCATGACGACTTCTTTC
ACCGACCTTCTTGCTTCTGATGATTATCCTACCAAAGGACTTGGTGATAGAATTGCAGAG
AGGACTGGTTCTGGAGTTCCTAAATTCAAGTCTCTTCCACCTCCTTCACTCCCTTTATCT
CCTCCTCCTTTTTCCCCTTCCTCTTACTTTGCTATTCCTCCTGGTTTAAGTCCAACTGAA
CTTTTAGACTCCCCTGTTCTTTTGTCTTCTTCAAACCTTCTTCCATCTCCGACAACAGGG
AGTTTTCCATCTCATGCTTTTAATTGGAAGAGCAGTAGCCATCGGGATGTGAAACAGGAA
GACAAAAACTACTCAGATTTTTCTTTCCAGCCTCAAGTAGGGACAGCTGCATCAATCTCT
CAATCCCAAACTAACCATGTCCCTTTGGGGCAGCAAGCATGGAATTATCAAGAGCCCACA
AAACAGAATGATCAAAATGCTAATGGAAGATCTGAATTCAACACTTTACAGAGTTTTATG
CAGAATAATAATGATCAGAACAATAGTGGAAACCAATACAATCAGAGTATAAGGGAGCAG
AAAAGGTCAGATGACGGATACAATTGGAGGAAATACGGGCAGAAACAAGTAAAAGGTAGT
GAAAATCCAAGAAGCTACTACAAGTGTACATACCCAAATTGTCCCACCAAGAAGAAGGTT
GAGAGATCTTTAGATGGTCAAATTACTGAAATTGTGTACAAGGGTAATCACAACCATCCA
AAGCCTCAGTCAACCAGAAGATCGTCGTCATCCACAGCTTCATCTGCAATCCAATCATAC
AATACACAAACTAATGAAATCCCAGATCATCAATCCTATGGTTCAAATGGACAAATGGAT
TCGGTTGCAACACCTGAGAATTCTTCTATTTCATTTGGGGATGATGATCATGAGCACACT
TCTCAAAAGAGTAGTAGGTCAAGAGGAGATGATCTTGATGAAGAGGAACCAGACTCAAAA
AGATGGAAAAGAGAAAACGAAAGTGAAGGTCTATCTGCACTAGGAGGGAGTAGGACAGTT
AGAGAACCTAGAGTTGTAGTTCAAACTACAAGTGATATCGATATCCTAGATGATGGTTAT
AGATGGAGGAAGTATGGTCAAAAAGTAGTGAAAGGAAATCCTAATCCCAGGAGCTACTAC
AAATGCACAAGTACGGGATGTCCAGTAAGAAAACATGTGGAAAGGGCATCACAAGACATA
AGGTCAGTGATAACAACCTATGAAGGGAAGCACAACCATGATGTTCCAGCAGCAAGGGGC
AGTGGCAACCACTCAATTAACCGACCTATGGCACCGACCGTAAGGCCTACTGTGACATCT
CATCAATCCAACTATCAAGTTCCATTGCAAAGTATAAGGCCACAACAGTCTGAAATGGGA
GCACCCTATACGCTTGAGATGTTGCAGAGGCCTAATAATTATGGTATCTCAGGATATGCA
AATTCAGGGGATTCATACGAAAACCAAGTTCAGGACAACAATGTGTTTTCAAGAACTAAG
GACGAGCCTCGAGATGACATGTTTATGGAGTCATTGCTTTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029302
PEP Infomation

pacid=37453221 transcript=PGSC0003DMT400043204 locus=PGSC0003DMG400016769 ID=PGSC0003DMT400043204.v4.03 annot-version=v4.03
Sequence

MAASSFSFPTSSSSFMTTSFTDLLASDDYPTKGLGDRIAERTGSGVPKFKSLPPPSLPLS
PPPFSPSSYFAIPPGLSPTELLDSPVLLSSSNLLPSPTTGSFPSHAFNWKSSSHRDVKQE
DKNYSDFSFQPQVGTAASISQSQTNHVPLGQQAWNYQEPTKQNDQNANGRSEFNTLQSFM
QNNNDQNNSGNQYNQSIREQKRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKV
ERSLDGQITEIVYKGNHNHPKPQSTRRSSSSTASSAIQSYNTQTNEIPDHQSYGSNGQMD
SVATPENSSISFGDDDHEHTSQKSSRSRGDDLDEEEPDSKRWKRENESEGLSALGGSRTV
REPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCPVRKHVERASQDI
RSVITTYEGKHNHDVPAARGSGNHSINRPMAPTVRPTVTSHQSNYQVPLQSIRPQQSEMG
APYTLEMLQRPNNYGISGYANSGDSYENQVQDNNVFSRTKDEPRDDMFMESLLC*

Transcript Sequence

Transcript ID

PGSC0003DMT400043204
Transcript Infomation

pacid=37453221 locus=PGSC0003DMG400016769 ID=PGSC0003DMT400043204.v4.03 annot-version=v4.03
Sequence

ATGGCTGCTTCAAGTTTCTCTTTTCCCACTTCATCTTCTTCATTCATGACGACTTCTTTC
ACCGACCTTCTTGCTTCTGATGATTATCCTACCAAAGGACTTGGTGATAGAATTGCAGAG
AGGACTGGTTCTGGAGTTCCTAAATTCAAGTCTCTTCCACCTCCTTCACTCCCTTTATCT
CCTCCTCCTTTTTCCCCTTCCTCTTACTTTGCTATTCCTCCTGGTTTAAGTCCAACTGAA
CTTTTAGACTCCCCTGTTCTTTTGTCTTCTTCAAACCTTCTTCCATCTCCGACAACAGGG
AGTTTTCCATCTCATGCTTTTAATTGGAAGAGCAGTAGCCATCGGGATGTGAAACAGGAA
GACAAAAACTACTCAGATTTTTCTTTCCAGCCTCAAGTAGGGACAGCTGCATCAATCTCT
CAATCCCAAACTAACCATGTCCCTTTGGGGCAGCAAGCATGGAATTATCAAGAGCCCACA
AAACAGAATGATCAAAATGCTAATGGAAGATCTGAATTCAACACTTTACAGAGTTTTATG
CAGAATAATAATGATCAGAACAATAGTGGAAACCAATACAATCAGAGTATAAGGGAGCAG
AAAAGGTCAGATGACGGATACAATTGGAGGAAATACGGGCAGAAACAAGTAAAAGGTAGT
GAAAATCCAAGAAGCTACTACAAGTGTACATACCCAAATTGTCCCACCAAGAAGAAGGTT
GAGAGATCTTTAGATGGTCAAATTACTGAAATTGTGTACAAGGGTAATCACAACCATCCA
AAGCCTCAGTCAACCAGAAGATCGTCGTCATCCACAGCTTCATCTGCAATCCAATCATAC
AATACACAAACTAATGAAATCCCAGATCATCAATCCTATGGTTCAAATGGACAAATGGAT
TCGGTTGCAACACCTGAGAATTCTTCTATTTCATTTGGGGATGATGATCATGAGCACACT
TCTCAAAAGAGTAGTAGGTCAAGAGGAGATGATCTTGATGAAGAGGAACCAGACTCAAAA
AGATGGAAAAGAGAAAACGAAAGTGAAGGTCTATCTGCACTAGGAGGGAGTAGGACAGTT
AGAGAACCTAGAGTTGTAGTTCAAACTACAAGTGATATCGATATCCTAGATGATGGTTAT
AGATGGAGGAAGTATGGTCAAAAAGTAGTGAAAGGAAATCCTAATCCCAGGAGCTACTAC
AAATGCACAAGTACGGGATGTCCAGTAAGAAAACATGTGGAAAGGGCATCACAAGACATA
AGGTCAGTGATAACAACCTATGAAGGGAAGCACAACCATGATGTTCCAGCAGCAAGGGGC
AGTGGCAACCACTCAATTAACCGACCTATGGCACCGACCGTAAGGCCTACTGTGACATCT
CATCAATCCAACTATCAAGTTCCATTGCAAAGTATAAGGCCACAACAGTCTGAAATGGGA
GCACCCTATACGCTTGAGATGTTGCAGAGGCCTAATAATTATGGTATCTCAGGATATGCA
AATTCAGGGGATTCATACGAAAACCAAGTTCAGGACAACAATGTGTTTTCAAGAACTAAG
GACGAGCCTCGAGATGACATGTTTATGGAGTCATTGCTTTGCTGA