Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043197
CDS Infomation

pacid=37451862 polypeptide=PGSC0003DMP400029296 locus=PGSC0003DMG401016766 ID=PGSC0003DMT400043197.v4.03 annot-version=v4.03
Sequence

ATGGAACCAAAGGGGGTTGGATTGTTAGATAGTGGCCGTAGGACTGTGGTTGGAGCAAAG
AGTAAAGTGGCTTCTCAGAATTTGGCACATTTGTTTAGAGCCAGCAGTGAGAAAATATCA
ATTCAATCTAACTGTGATAGCAAGCTTGAGAAGAGGAAAAGGATCGTTGACTGCGAGTCT
AATTGTCAATCACATCTCAGGAAATCTGTACACAAGAACTACCTGAACTTTAAGAGAAGC
AGACTGCCTCAACGTGTACTGTTTTATCAGAACGGTGAATGGACCGACTTCCCTCAAGAT
ATTATTCCTATAGTTAAAGAAGATTTTCAGGCAAAAAAGGCTGTTATTGAGGTGAAAGTT
TGTGACTTTCATATAATTCTTGATACTCTACATATGGTTCAAATAGATATGATAAATGGT
TTACAGAAACCTATTGCCTGGATAGATGAAGTAGGTAGGTGTTTCTTCCCTGAGTCGTAT
CTTATCAGTAGTGAAATGCATGGGAATTTTGAAACCCTGTTAAAGAGAACTGAAGAGTTC
ATGACAACTGAGCCAGCTAGGATAACTGATATTAAGTTGCAACTTGACATTGACTTAAAT
GGACTGGATAATCGTAATTTGGAAGAAGATGTGGAAGAGTCAAATATCGGTTATAAGAGG
ATTAAAGTATATCCTCCTAAAGACAGTCAAGAATTTGCTGATTATAAAAAATCAGATGCA
AAAATGGAACAAGTTGCAGAAAATAAACAGAACCAGGAAACACCGTCTCCTGACTTAGTA
GCTAGCCTGATATTGGTGAATGCAGAATCTGTCGAAAATATGTTTATTATGGGAATGAAT
GTTATCCCCAACAAGGATGAGATCAAAATTACCAAATGCTCTAGTAATTATTTGAGAACT
CACTTGGAACTCTTTGAGAAGCAGGTTGAAATAACGCAAAAATATCGTGGAAACGCAAAT
GTTCGATATGCTTGGCTTGCCGCTTCCAAAGATTTGATATCTACAATTATGAAGTACGGC
CTTGCACCTGGAGGACCTAAGTATAGGCCTAAATTTGGAGTTGGAGTTCACCTTAGTGCT
CTCCATTGTGCCTTCAAAAGTGCTATTAATTGCGATGCTGATGAAAATGGCGTACATTAC
ATGGTTTTTGCTCGTGTAATTTTGGGTAATGTGGAACCTTTGCACTGCGGATCTGAACAA
TGGCATCCCAGTGACGAAAAATACGATAGTGGAGTTGATGATCTCGAGAATCCTACTCAT
TATGTTGTTTGGAATATGAATTTGAATACACATATATACCCAGTGTGTGTTGTGAGCTTC
AAAATTCCTCCAGGAGCTGAAGGACCCCACTTTGGAAATGATAGTCGGATTGATGTCTCA
GGTGTCAATACTTGTCCTCGGGGCCCTGTGGAACAGGGAAGTCATCGTTATCAAATATCA
CTGGTTAAGTTGGCCCTAGAAGAGGCTGCGAGGATTCCAAAGTCCCTTGGGGTGCCATTT
TCCTTGTTGATTGATGCAATCTCCAATGAAGTAACTGCCGAGAAAATGAACCATGTTACT
AGAAATCTTGAGTTGCTTGAGTTCAAGAAGATATGTAGGGATGAATTTGAGAAACGGTTG
AGGTTTATCGTAGGCGATACTCTGTTGAAGTCCACAATGAAAAGTTTGCTGTGCAAGATA
CAATCTAAACCCATTGAATTGGTTCAGCCAAAGCAAGAGCCACAAAGTGCTGCCTTCAAA
GGAAATACTGCCCAATTCCATTGGCTAGAGCCACAGACCGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029296
PEP Infomation

pacid=37451862 transcript=PGSC0003DMT400043197 locus=PGSC0003DMG401016766 ID=PGSC0003DMT400043197.v4.03 annot-version=v4.03
Sequence

MEPKGVGLLDSGRRTVVGAKSKVASQNLAHLFRASSEKISIQSNCDSKLEKRKRIVDCES
NCQSHLRKSVHKNYLNFKRSRLPQRVLFYQNGEWTDFPQDIIPIVKEDFQAKKAVIEVKV
CDFHIILDTLHMVQIDMINGLQKPIAWIDEVGRCFFPESYLISSEMHGNFETLLKRTEEF
MTTEPARITDIKLQLDIDLNGLDNRNLEEDVEESNIGYKRIKVYPPKDSQEFADYKKSDA
KMEQVAENKQNQETPSPDLVASLILVNAESVENMFIMGMNVIPNKDEIKITKCSSNYLRT
HLELFEKQVEITQKYRGNANVRYAWLAASKDLISTIMKYGLAPGGPKYRPKFGVGVHLSA
LHCAFKSAINCDADENGVHYMVFARVILGNVEPLHCGSEQWHPSDEKYDSGVDDLENPTH
YVVWNMNLNTHIYPVCVVSFKIPPGAEGPHFGNDSRIDVSGVNTCPRGPVEQGSHRYQIS
LVKLALEEAARIPKSLGVPFSLLIDAISNEVTAEKMNHVTRNLELLEFKKICRDEFEKRL
RFIVGDTLLKSTMKSLLCKIQSKPIELVQPKQEPQSAAFKGNTAQFHWLEPQTE*

Transcript Sequence

Transcript ID

PGSC0003DMT400043197
Transcript Infomation

pacid=37451862 locus=PGSC0003DMG401016766 ID=PGSC0003DMT400043197.v4.03 annot-version=v4.03
Sequence

ATGGAACCAAAGGGGGTTGGATTGTTAGATAGTGGCCGTAGGACTGTGGTTGGAGCAAAG
AGTAAAGTGGCTTCTCAGAATTTGGCACATTTGTTTAGAGCCAGCAGTGAGAAAATATCA
ATTCAATCTAACTGTGATAGCAAGCTTGAGAAGAGGAAAAGGATCGTTGACTGCGAGTCT
AATTGTCAATCACATCTCAGGAAATCTGTACACAAGAACTACCTGAACTTTAAGAGAAGC
AGACTGCCTCAACGTGTACTGTTTTATCAGAACGGTGAATGGACCGACTTCCCTCAAGAT
ATTATTCCTATAGTTAAAGAAGATTTTCAGGCAAAAAAGGCTGTTATTGAGGTGAAAGTT
TGTGACTTTCATATAATTCTTGATACTCTACATATGGTTCAAATAGATATGATAAATGGT
TTACAGAAACCTATTGCCTGGATAGATGAAGTAGGTAGGTGTTTCTTCCCTGAGTCGTAT
CTTATCAGTAGTGAAATGCATGGGAATTTTGAAACCCTGTTAAAGAGAACTGAAGAGTTC
ATGACAACTGAGCCAGCTAGGATAACTGATATTAAGTTGCAACTTGACATTGACTTAAAT
GGACTGGATAATCGTAATTTGGAAGAAGATGTGGAAGAGTCAAATATCGGTTATAAGAGG
ATTAAAGTATATCCTCCTAAAGACAGTCAAGAATTTGCTGATTATAAAAAATCAGATGCA
AAAATGGAACAAGTTGCAGAAAATAAACAGAACCAGGAAACACCGTCTCCTGACTTAGTA
GCTAGCCTGATATTGGTGAATGCAGAATCTGTCGAAAATATGTTTATTATGGGAATGAAT
GTTATCCCCAACAAGGATGAGATCAAAATTACCAAATGCTCTAGTAATTATTTGAGAACT
CACTTGGAACTCTTTGAGAAGCAGGTTGAAATAACGCAAAAATATCGTGGAAACGCAAAT
GTTCGATATGCTTGGCTTGCCGCTTCCAAAGATTTGATATCTACAATTATGAAGTACGGC
CTTGCACCTGGAGGACCTAAGTATAGGCCTAAATTTGGAGTTGGAGTTCACCTTAGTGCT
CTCCATTGTGCCTTCAAAAGTGCTATTAATTGCGATGCTGATGAAAATGGCGTACATTAC
ATGGTTTTTGCTCGTGTAATTTTGGGTAATGTGGAACCTTTGCACTGCGGATCTGAACAA
TGGCATCCCAGTGACGAAAAATACGATAGTGGAGTTGATGATCTCGAGAATCCTACTCAT
TATGTTGTTTGGAATATGAATTTGAATACACATATATACCCAGTGTGTGTTGTGAGCTTC
AAAATTCCTCCAGGAGCTGAAGGACCCCACTTTGGAAATGATAGTCGGATTGATGTCTCA
GGTGTCAATACTTGTCCTCGGGGCCCTGTGGAACAGGGAAGTCATCGTTATCAAATATCA
CTGGTTAAGTTGGCCCTAGAAGAGGCTGCGAGGATTCCAAAGTCCCTTGGGGTGCCATTT
TCCTTGTTGATTGATGCAATCTCCAATGAAGTAACTGCCGAGAAAATGAACCATGTTACT
AGAAATCTTGAGTTGCTTGAGTTCAAGAAGATATGTAGGGATGAATTTGAGAAACGGTTG
AGGTTTATCGTAGGCGATACTCTGTTGAAGTCCACAATGAAAAGTTTGCTGTGCAAGATA
CAATCTAAACCCATTGAATTGGTTCAGCCAAAGCAAGAGCCACAAAGTGCTGCCTTCAAA
GGAAATACTGCCCAATTCCATTGGCTAGAGCCACAGACCGAGTAA