Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043125
CDS Infomation

pacid=37428901 polypeptide=PGSC0003DMP400029260 locus=PGSC0003DMG400016733 ID=PGSC0003DMT400043125.v4.03 annot-version=v4.03
Sequence

ATGGAAAATTTACCTAAATGTGGAGCTAATTATGTGCCTCTTACTCCTCTCACCTTCTTA
ACAAGAGCCTCCAATTCTTATGCCAACCGCACCTCTATTATTTATGCCAATGTTCGCTTC
AATTGGAGGGAAACCCATGAACGTTGTTGTCGCCTTGCTTCCTCCCTCCGCTCCTTAAAC
ATTGTCAAGAACGACGTGGTCTCGGTCCTTGCACCAAATGTACCGGCCATGTTAGAAATG
CATTTTGCTGTGCCAATGGCAGGGGCTGTGCTCAACGCCATCAATACAAGGCTGGACGCT
AGAAATGTTGCCCTTATTCTCAAGCACTCAGAAGCCAAGATCTTTTTTATCGACTATGAA
TACATCGACAAAGCTAAAAAGGCCATTGAAATACTAATGTCTGACTTTCAAATGCCAATG
CCTCTAGTTGTTGTCATTGATGACCTCGATTCCCCTACTGGAATCCGGTTAGGGGAGCTC
GAGTACGAGCAATTGGTGTTCCAAGGCAATCCTAAATATGTCCTTGAGAATATTGATGAT
GAATGGGATCCAATTACTTTGAGCTATACATCAGGTACAACTTCAGAGCCAAAGGGAGTT
GTGTACAGCCACAGAGGTGCTTTTTTGAGCACTTTGAGTTTGATTTTGGGATGGGAGATG
GGTACTGAGCCTGTCTACTTATGGTCCCTCCCTATGTTTCACTGCAATGGTTGGACTTTC
ACCTGGGGAATAGCTGCAAGGGGTGGGACCAATGTTTGTATCCGCAATACGACAGCCCAA
GAAATCTACTCCAACATAGCGCTACACAAAGTAACGCATATGTGTGCTGCACCTATTATT
CTCAACATAATCCTTGAGGCCAAGCCACACGAGCAGCATAAAATAATGACCCCAGTACAA
GTTTTGGTGGGTGGTGCACCCCCACCAGCACCACTGCTTGAAAAAATCGAGAGGGTGGGG
TTCCACGTGGTCCACGCCTATGGGCTAACCGAGGCTACTGGACCAGCCCTGGTGTGCGAG
TTTCAAGCCAAGTGGAACAAATTACCCTGGGAAGAACAAGCCAGGTTAAAGGCAAGACAA
GGGCTGGGCATACTAACACTTGCTGATGTTGATGTGAAGAACTTCAAGAATATGGAAAGT
GTGCCTCGTGATGGGAAAACAACAGGGGAAATATGCCTGAGGGGAAGCAGTATCATGAAA
GGGTACTTAAAGAATGAAAAGGCAAATTCCGAAGTATTCAAGAATGGTTGGTTTTTCACA
GGGGATATGGGAGTGATTCATCCAGATGGGTATTTGGAAATCAAAGATAGATGCAAAGAT
GTGATCATATCAGGTGGAGAGAACATTAGCAGCCTAGAAGTAGAAAGTGCAATAATGAAA
CATCCATATGTAATAGAGGCCTCTGTTGTGGCCATGCCACATCCAAGGTGGGGTGAAAGT
CCATGTGCCTTTGTTATATCGAGGAAAGACTCAAACTTGAAAGAATCAGACATCATAGCA
CACTGTAGGAAGAACTTGCCGGGATTCATGGTACCAAAGAAGGTTCAATTTGTGGAAGAA
TTGCCTAAAACGGGAACAGGGAAGGTGCAGAAGAATCATTTGAGAGCAGTGGCAAAGACA
TTTGTGGTGTCTGATCAAACAAGCAAAAAATCAAACCAAGTCAAAAGGGAAAATCCTCGA
GCATACGATCAAAGTCAGGAGCAGATTCTTGCTTTGTCTCGTCTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029260
PEP Infomation

pacid=37428901 transcript=PGSC0003DMT400043125 locus=PGSC0003DMG400016733 ID=PGSC0003DMT400043125.v4.03 annot-version=v4.03
Sequence

MENLPKCGANYVPLTPLTFLTRASNSYANRTSIIYANVRFNWRETHERCCRLASSLRSLN
IVKNDVVSVLAPNVPAMLEMHFAVPMAGAVLNAINTRLDARNVALILKHSEAKIFFIDYE
YIDKAKKAIEILMSDFQMPMPLVVVIDDLDSPTGIRLGELEYEQLVFQGNPKYVLENIDD
EWDPITLSYTSGTTSEPKGVVYSHRGAFLSTLSLILGWEMGTEPVYLWSLPMFHCNGWTF
TWGIAARGGTNVCIRNTTAQEIYSNIALHKVTHMCAAPIILNIILEAKPHEQHKIMTPVQ
VLVGGAPPPAPLLEKIERVGFHVVHAYGLTEATGPALVCEFQAKWNKLPWEEQARLKARQ
GLGILTLADVDVKNFKNMESVPRDGKTTGEICLRGSSIMKGYLKNEKANSEVFKNGWFFT
GDMGVIHPDGYLEIKDRCKDVIISGGENISSLEVESAIMKHPYVIEASVVAMPHPRWGES
PCAFVISRKDSNLKESDIIAHCRKNLPGFMVPKKVQFVEELPKTGTGKVQKNHLRAVAKT
FVVSDQTSKKSNQVKRENPRAYDQSQEQILALSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400043125
Transcript Infomation

pacid=37428901 locus=PGSC0003DMG400016733 ID=PGSC0003DMT400043125.v4.03 annot-version=v4.03
Sequence

ATGGAAAATTTACCTAAATGTGGAGCTAATTATGTGCCTCTTACTCCTCTCACCTTCTTA
ACAAGAGCCTCCAATTCTTATGCCAACCGCACCTCTATTATTTATGCCAATGTTCGCTTC
AATTGGAGGGAAACCCATGAACGTTGTTGTCGCCTTGCTTCCTCCCTCCGCTCCTTAAAC
ATTGTCAAGAACGACGTGGTCTCGGTCCTTGCACCAAATGTACCGGCCATGTTAGAAATG
CATTTTGCTGTGCCAATGGCAGGGGCTGTGCTCAACGCCATCAATACAAGGCTGGACGCT
AGAAATGTTGCCCTTATTCTCAAGCACTCAGAAGCCAAGATCTTTTTTATCGACTATGAA
TACATCGACAAAGCTAAAAAGGCCATTGAAATACTAATGTCTGACTTTCAAATGCCAATG
CCTCTAGTTGTTGTCATTGATGACCTCGATTCCCCTACTGGAATCCGGTTAGGGGAGCTC
GAGTACGAGCAATTGGTGTTCCAAGGCAATCCTAAATATGTCCTTGAGAATATTGATGAT
GAATGGGATCCAATTACTTTGAGCTATACATCAGGTACAACTTCAGAGCCAAAGGGAGTT
GTGTACAGCCACAGAGGTGCTTTTTTGAGCACTTTGAGTTTGATTTTGGGATGGGAGATG
GGTACTGAGCCTGTCTACTTATGGTCCCTCCCTATGTTTCACTGCAATGGTTGGACTTTC
ACCTGGGGAATAGCTGCAAGGGGTGGGACCAATGTTTGTATCCGCAATACGACAGCCCAA
GAAATCTACTCCAACATAGCGCTACACAAAGTAACGCATATGTGTGCTGCACCTATTATT
CTCAACATAATCCTTGAGGCCAAGCCACACGAGCAGCATAAAATAATGACCCCAGTACAA
GTTTTGGTGGGTGGTGCACCCCCACCAGCACCACTGCTTGAAAAAATCGAGAGGGTGGGG
TTCCACGTGGTCCACGCCTATGGGCTAACCGAGGCTACTGGACCAGCCCTGGTGTGCGAG
TTTCAAGCCAAGTGGAACAAATTACCCTGGGAAGAACAAGCCAGGTTAAAGGCAAGACAA
GGGCTGGGCATACTAACACTTGCTGATGTTGATGTGAAGAACTTCAAGAATATGGAAAGT
GTGCCTCGTGATGGGAAAACAACAGGGGAAATATGCCTGAGGGGAAGCAGTATCATGAAA
GGGTACTTAAAGAATGAAAAGGCAAATTCCGAAGTATTCAAGAATGGTTGGTTTTTCACA
GGGGATATGGGAGTGATTCATCCAGATGGGTATTTGGAAATCAAAGATAGATGCAAAGAT
GTGATCATATCAGGTGGAGAGAACATTAGCAGCCTAGAAGTAGAAAGTGCAATAATGAAA
CATCCATATGTAATAGAGGCCTCTGTTGTGGCCATGCCACATCCAAGGTGGGGTGAAAGT
CCATGTGCCTTTGTTATATCGAGGAAAGACTCAAACTTGAAAGAATCAGACATCATAGCA
CACTGTAGGAAGAACTTGCCGGGATTCATGGTACCAAAGAAGGTTCAATTTGTGGAAGAA
TTGCCTAAAACGGGAACAGGGAAGGTGCAGAAGAATCATTTGAGAGCAGTGGCAAAGACA
TTTGTGGTGTCTGATCAAACAAGCAAAAAATCAAACCAAGTCAAAAGGGAAAATCCTCGA
GCATACGATCAAAGTCAGGAGCAGATTCTTGCTTTGTCTCGTCTTTAG