Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043124
CDS Infomation

pacid=37426064 polypeptide=PGSC0003DMP400029259 locus=PGSC0003DMG400016732 ID=PGSC0003DMT400043124.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGCTGAAGAATTGAAACTGAAGAGCTTCCTGAAATGGTCAACGGAGCAGGGA
ATCTCAGATTCTCCTTCAACTTGTACAACCCAATCAGATTCATGTTTGGGAAACACCCTT
TGTGTCTCTAATTTCCCTAAAGCCGGAGGGAGAGGTTTAGCAGCAGTTCGTGATATTAAG
AAAGGGGAATTGATTCTTAGAGTTCCAAAGGGAGCGTTAATGACTAGTCAAAATCTTATG
AAGAACGATGAGGCATTCTCCATTGCTGTCAAGAATCACCCTTATCTGTGCTCCACACAG
ATATTGGCTGTTGGATTGTTAAATGAAGCGAACAAGGGGAAGAGTTCTAGGTGGTGGCCC
TATCTAAAACAGTTTCCCCGCAGCTATTACACACTTGCGGATTTTGGCAAATTCGAGATA
CAAGCATTGCAAATTGATGATGCCATATGGGCTGCACAAAAGGCTTCTCGGAGGGCTGAA
GAGGAGTGGAATGAAGTGACTCAGCTTATGCATGAACTGAAGCTCAAGCCACAATTCCTC
GCTCTTAAGGCATGGCTCTGGGCCTCTGGTTCTATCTCCTCGCGCACCATGCATATACCT
TGGGATGAAGCTGGATGTTTATGCCCTGTGGGAGATTTCTTCAATTATGCAGCACCTGAA
GAGGAAACATCTAATTATGAAGATCAAGGTGCTGGAAAGCCTTATTCTTTGCAAGAAAAC
GGTACACTTAAATCAGAAACTGAGTTGGATGCTGCCGCTAGGCTAATAGATGCTGGATAT
GAGAAAGACGTTTCTTCATACCATTTCTATGCTAGAAGAAACTACCGGAAAGGAGACCAG
GTTCTTCTAAGCTACGGAACCTACACAAATCTGGAGCTTCTTCAACACTATGGATTTCTT
CTGACTGAGAACCCAAATGACAAGGCCTTTATACCTTTAGAACCAGATATGTATTCTCTC
TGCTCATGGGATAATGAGTCACTATACATTCATCCAGATGGGAAGCCATCCTTTGCACTA
CTATCAACATTGCGATTCTGGGCAGTCCCTAAAACCAGTCGCAAATCTGTTGTACACCTT
GTTTATTCGGGGAACAGACTTTCAACAGAGAGTGAAGTTGTTGCAATGAGATGGCTAATA
ACGAAATGCAGAACCGCATTGGAAGTTCTTCAAACAACTGCTCCAGAAGATTGTAAGTTG
CTCAACATCCTAAATAAGTTTCAAGATAATCATAAATTCCCGGAGATCAAAGAGATGCCG
CCACCACTTGCTAGTGAGCTTTGTGCTTTTATTGAAAAAAACAAGAATGTGGTCAGTGAA
GGAATTTGCTCCATGTCATGTGTAGCTAGAAGGTCCATTGAGAGATGGAAATTAGCTACT
CTGTGGAGGTTTCTCTACAAGCAAATACTTTGCAGTTGCATTATACATTGTAGTGCTGTA
ATTTATTATTTAGGGGTCGATCGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029259
PEP Infomation

pacid=37426064 transcript=PGSC0003DMT400043124 locus=PGSC0003DMG400016732 ID=PGSC0003DMT400043124.v4.03 annot-version=v4.03
Sequence

MEEAEELKLKSFLKWSTEQGISDSPSTCTTQSDSCLGNTLCVSNFPKAGGRGLAAVRDIK
KGELILRVPKGALMTSQNLMKNDEAFSIAVKNHPYLCSTQILAVGLLNEANKGKSSRWWP
YLKQFPRSYYTLADFGKFEIQALQIDDAIWAAQKASRRAEEEWNEVTQLMHELKLKPQFL
ALKAWLWASGSISSRTMHIPWDEAGCLCPVGDFFNYAAPEEETSNYEDQGAGKPYSLQEN
GTLKSETELDAAARLIDAGYEKDVSSYHFYARRNYRKGDQVLLSYGTYTNLELLQHYGFL
LTENPNDKAFIPLEPDMYSLCSWDNESLYIHPDGKPSFALLSTLRFWAVPKTSRKSVVHL
VYSGNRLSTESEVVAMRWLITKCRTALEVLQTTAPEDCKLLNILNKFQDNHKFPEIKEMP
PPLASELCAFIEKNKNVVSEGICSMSCVARRSIERWKLATLWRFLYKQILCSCIIHCSAV
IYYLGVDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400043124
Transcript Infomation

pacid=37426064 locus=PGSC0003DMG400016732 ID=PGSC0003DMT400043124.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGCTGAAGAATTGAAACTGAAGAGCTTCCTGAAATGGTCAACGGAGCAGGGA
ATCTCAGATTCTCCTTCAACTTGTACAACCCAATCAGATTCATGTTTGGGAAACACCCTT
TGTGTCTCTAATTTCCCTAAAGCCGGAGGGAGAGGTTTAGCAGCAGTTCGTGATATTAAG
AAAGGGGAATTGATTCTTAGAGTTCCAAAGGGAGCGTTAATGACTAGTCAAAATCTTATG
AAGAACGATGAGGCATTCTCCATTGCTGTCAAGAATCACCCTTATCTGTGCTCCACACAG
ATATTGGCTGTTGGATTGTTAAATGAAGCGAACAAGGGGAAGAGTTCTAGGTGGTGGCCC
TATCTAAAACAGTTTCCCCGCAGCTATTACACACTTGCGGATTTTGGCAAATTCGAGATA
CAAGCATTGCAAATTGATGATGCCATATGGGCTGCACAAAAGGCTTCTCGGAGGGCTGAA
GAGGAGTGGAATGAAGTGACTCAGCTTATGCATGAACTGAAGCTCAAGCCACAATTCCTC
GCTCTTAAGGCATGGCTCTGGGCCTCTGGTTCTATCTCCTCGCGCACCATGCATATACCT
TGGGATGAAGCTGGATGTTTATGCCCTGTGGGAGATTTCTTCAATTATGCAGCACCTGAA
GAGGAAACATCTAATTATGAAGATCAAGGTGCTGGAAAGCCTTATTCTTTGCAAGAAAAC
GGTACACTTAAATCAGAAACTGAGTTGGATGCTGCCGCTAGGCTAATAGATGCTGGATAT
GAGAAAGACGTTTCTTCATACCATTTCTATGCTAGAAGAAACTACCGGAAAGGAGACCAG
GTTCTTCTAAGCTACGGAACCTACACAAATCTGGAGCTTCTTCAACACTATGGATTTCTT
CTGACTGAGAACCCAAATGACAAGGCCTTTATACCTTTAGAACCAGATATGTATTCTCTC
TGCTCATGGGATAATGAGTCACTATACATTCATCCAGATGGGAAGCCATCCTTTGCACTA
CTATCAACATTGCGATTCTGGGCAGTCCCTAAAACCAGTCGCAAATCTGTTGTACACCTT
GTTTATTCGGGGAACAGACTTTCAACAGAGAGTGAAGTTGTTGCAATGAGATGGCTAATA
ACGAAATGCAGAACCGCATTGGAAGTTCTTCAAACAACTGCTCCAGAAGATTGTAAGTTG
CTCAACATCCTAAATAAGTTTCAAGATAATCATAAATTCCCGGAGATCAAAGAGATGCCG
CCACCACTTGCTAGTGAGCTTTGTGCTTTTATTGAAAAAAACAAGAATGTGGTCAGTGAA
GGAATTTGCTCCATGTCATGTGTAGCTAGAAGGTCCATTGAGAGATGGAAATTAGCTACT
CTGTGGAGGTTTCTCTACAAGCAAATACTTTGCAGTTGCATTATACATTGTAGTGCTGTA
ATTTATTATTTAGGGGTCGATCGGTAG