Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043119
CDS Infomation

pacid=37425322 polypeptide=PGSC0003DMP400029254 locus=PGSC0003DMG400016731 ID=PGSC0003DMT400043119.v4.03 annot-version=v4.03
Sequence

ATGTTGAGAAGAAGAATCACTTCACTACTATCATCGTCTACCCTCCAAAATGTTCCAATC
TACAGCGAACCCATCAAGATTTCTCATCACATATTCACATCTTCACAAAAGTTTCCATTT
TTGCAATTTTCTCAACGCCCCATCTCCAGCATTGGATCGTTGGGGTGTCAGTTTCGCAGA
GCTTACAGTCTTCTGAGCCTAAATGATTTGCAAGATAACAAAGGTGCTAGGAAGCAGAAG
ACTCGTAAGGGAAGAGGTATTGGGTCGGGTAAAGGAAAGACGGCGGGTCGAGGACATAAG
GGTCAGAAAGCTAGAGGGACATATAAGTTCGGGTTTGAAGGTGGACAAACCCCACTTCGT
CGCCGTGTGCCTAAACGTGGGTTTAAGAACCCATTCAGTCTCACATTTCAGCCAGTTGGG
TTGGGAAAGATTGCAAAGCTGATAAATGCTGGGAAGATTGACTCGTCAGAGTTGATCACA
ATGAAAACTCTAAAGGATTCCGGTGCAATAGGGAAGCAAATAGAAGATGGAGCCAGGTTG
ATGGGGCGTGGAGCTGAACATATTCAGTGGCCCATCCATTTAGAGGTCTCAAGGGTGACC
GCTAGAGCTAAAGCAGCCGTGGAAGCAGCGGGTGGGTCTGTAAGGAGAGTGCATTACAAC
AAACTTGGGTTACGGGCACTACTGAAACCTGAGTGGTTCGAGAAAAAGGGCAGGTTGCTC
CCAAGACCAGCAAGGCCTCCACCAAAACTGAAGGATAAGGTGGATAGCATTGGGCGGTTG
CCTGCCCCAACCAAGCCACTTCCTTTTGTAACTGAAGAGGCTGAATCCATGTCTGCTACC
CCGGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029254
PEP Infomation

pacid=37425322 transcript=PGSC0003DMT400043119 locus=PGSC0003DMG400016731 ID=PGSC0003DMT400043119.v4.03 annot-version=v4.03
Sequence

MLRRRITSLLSSSTLQNVPIYSEPIKISHHIFTSSQKFPFLQFSQRPISSIGSLGCQFRR
AYSLLSLNDLQDNKGARKQKTRKGRGIGSGKGKTAGRGHKGQKARGTYKFGFEGGQTPLR
RRVPKRGFKNPFSLTFQPVGLGKIAKLINAGKIDSSELITMKTLKDSGAIGKQIEDGARL
MGRGAEHIQWPIHLEVSRVTARAKAAVEAAGGSVRRVHYNKLGLRALLKPEWFEKKGRLL
PRPARPPPKLKDKVDSIGRLPAPTKPLPFVTEEAESMSATPA*

Transcript Sequence

Transcript ID

PGSC0003DMT400043119
Transcript Infomation

pacid=37425322 locus=PGSC0003DMG400016731 ID=PGSC0003DMT400043119.v4.03 annot-version=v4.03
Sequence

ATGTTGAGAAGAAGAATCACTTCACTACTATCATCGTCTACCCTCCAAAATGTTCCAATC
TACAGCGAACCCATCAAGATTTCTCATCACATATTCACATCTTCACAAAAGTTTCCATTT
TTGCAATTTTCTCAACGCCCCATCTCCAGCATTGGATCGTTGGGGTGTCAGTTTCGCAGA
GCTTACAGTCTTCTGAGCCTAAATGATTTGCAAGATAACAAAGGTGCTAGGAAGCAGAAG
ACTCGTAAGGGAAGAGGTATTGGGTCGGGTAAAGGAAAGACGGCGGGTCGAGGACATAAG
GGTCAGAAAGCTAGAGGGACATATAAGTTCGGGTTTGAAGGTGGACAAACCCCACTTCGT
CGCCGTGTGCCTAAACGTGGGTTTAAGAACCCATTCAGTCTCACATTTCAGCCAGTTGGG
TTGGGAAAGATTGCAAAGCTGATAAATGCTGGGAAGATTGACTCGTCAGAGTTGATCACA
ATGAAAACTCTAAAGGATTCCGGTGCAATAGGGAAGCAAATAGAAGATGGAGCCAGGTTG
ATGGGGCGTGGAGCTGAACATATTCAGTGGCCCATCCATTTAGAGGTCTCAAGGGTGACC
GCTAGAGCTAAAGCAGCCGTGGAAGCAGCGGGTGGGTCTGTAAGGAGAGTGCATTACAAC
AAACTTGGGTTACGGGCACTACTGAAACCTGAGTGGTTCGAGAAAAAGGGCAGGTTGCTC
CCAAGACCAGCAAGGCCTCCACCAAAACTGAAGGATAAGGTGGATAGCATTGGGCGGTTG
CCTGCCCCAACCAAGCCACTTCCTTTTGTAACTGAAGAGGCTGAATCCATGTCTGCTACC
CCGGCTTGA