Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043113
CDS Infomation

pacid=37427378 polypeptide=PGSC0003DMP400029249 locus=PGSC0003DMG400016728 ID=PGSC0003DMT400043113.v4.03 annot-version=v4.03
Sequence

ATGGGGAAATCAGGTGGTAGGAAAAAGAAGGCGGGTGTTAGTCAAAATCAAAACCAGAAC
CAAGGGGCTGTTGGGAATAGCCATACACCTGTTGTTAATGGTAGTGTTGATTTGGACTCA
TCAATTTTCTCAAAAAGAGCCCATGAGCTGAAGGAAGAAGGAAACAAAAGGTTTCAGGCT
AAGGATTATGTGGGTGCCCTGGAGCAATATGAGAATGCTCTCAAACTTACACCAAAGACA
CACCCTGATAGAGCTGTTTTTCATAGCAATAGGGCAGCCTGTTTGATGCAAATGAAGCCC
ATAGACTATGATTCTGTTATTTCTGAATGTACTATGGCACTTCTGGTTCAGCCCTCTTAT
GTTCGGGCCCTTCTACGAAGGGCTCGTGCATTTGAGGCTGTGAGGAAGTATGAAATGGCG
ATGCAAGATGTCCAGATACTATTGGGTGCTGATCCAAATCACCGAGATGCTTTGGAGATT
GCTGGACGATTGAGGATGGCACTTGGTCCTCGTCCAGAGGCCCAGCAGGACCTCCAAAGC
CGCCCATCTCCAGCTGCACTTGGTGCTTCTGCAGTGGGTGCAGCTCCTATTGCTGGCTTA
GGGCCATGCTTACCTGCTCGGCCAATGTCTAAGAAGCCAGCACCTTTAGGTGGGGCTTCA
GCTATATCAGTTAATAACAAGCCTGAGAAGCCATATCAAGTTACGCCAGCTGAAAATGGT
CCTCAAGCCAAAGTTCAGTTACCAAAGGTTATTTTGAAGCCTGCAAATGGTCCTTCCAGA
CCACATGCTGATCTCAATAAGGATGGCCAAAGAGAGAAGGCATCTTCATCAGCATCTAGT
GTTGTTCATGGACATTCTAAAGATGTTGCCATTCGTTGGAGGCCATTGAAGCTTGTTTAT
GATCATGATATAAGGCTTGCCCAGATGCCTGTGACTTGCAGTTTTAAAGTGTTGAGGGAT
ATTGTTGGCAAACGGTTCCCTATGTCAAAATCTGTTCTTGTTAAATATAAGGACAGTGAT
GGTGATTTAGTAACTATTACCTGTACGGCTGAACTTAGATCGGCAGAGTCTTGGGTTGAT
GGTTTACTGCCAAAAGACCCTGATGCAGATAAAACCGACGCCATTGGGATGTTAAGGTTG
CACGTCGTTGAGGTGAGTCCTGAACAAGAGCCAGCCTTGTTGGAAGAGGAAGAGGAGAAG
CCTGTCGAGAGCGAAGGGAGCAAAGGGGATGATAGTGGATCCCATTCTTCAATAAGTGAT
TCGGTGGTTGAAACTGTGGATAATGAGAGCAATAAGGCAGAGAAGGTAACTATCAAAGAG
AAAGCGGCTACAACCGAAAATCCTGACTGCAAAGAGGTTGAAATGGATGACTGGCTTTTC
GAGTTTGCTCAGTTATTCAGGACCCATGTAGGCATCGATCCAGATGCTCACATTGATCTG
CATGAGCTTGGGATGGAGCTTTGCTCTGAAGCCCTTGAGGAAACTGTGACAAGTGAAGAG
GCTCAAGTTCTTTTCGACAAGGCTGCCTTAAAATTTCAGGAGGTTGCAGCTCTTGCTTTC
TTCAACTGGGGAAATGTTCACATGTGCTCAGCAAGGAAAAGAATTCCAATCGATGATTCT
GCTTCAAAGGAGATGATGGCTACACAACTCCAAGCAGCATATGACTGGGTGAAAGAAAAA
TATTCTCTGGCCAAAGAGAAGTATGAGGAGGCACTCTTAATCAAACCAGACTTTTATGAG
GGGTTACTGGCATTGGGGCAGCAGCAATTTGAAATGGCAAAACTTTACTGGTCCTTTATC
TTGGCTAAGAAAGAGGACCTATCAAATTGGGATCCTACTGAGACTCTTGCACTCTTTGAC
AGTGCAGAATTAAAAATGAAAGCTGCAACAGAAATGTGGGAGAAAATTGAAGAGCAGAGA
GCTAATGAGCTAAAGGATCCTAGCGCCAGCAAGAAGGATGAATTATTAAGGAGAAGGAAG
AAGCAAACAAGTGGTCCTGAAGGTGAGGCGTCAGCTGCTGGTGGTCCAGCTGAAATTTCA
GCTGACGAGGCCGCAGAGCAAGCTGCTGTTATGAGATCGCAGATCCATTTATTTTGGGGT
AATATGCTCTTTGAGCGCTCTCAAGTTGAATGCAAGTTGGCTTTGGCTGGTTGGAAGAAA
AACCTTGATACAGCAGTTGAGCGATTCAAGCTTGCTGGAGCTTCTGAAAGTGACATCTCA
ACAGTTTTGAAGAACCATTGTTCCAATGAGGAAGCTGCAGAGGGATCTAAGCAAATGGTT
GAGAGCTTGAACACTGATGAAGGTGCAAATCATAAGAATGATGCTAGTCAAGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029249
PEP Infomation

pacid=37427378 transcript=PGSC0003DMT400043113 locus=PGSC0003DMG400016728 ID=PGSC0003DMT400043113.v4.03 annot-version=v4.03
Sequence

MGKSGGRKKKAGVSQNQNQNQGAVGNSHTPVVNGSVDLDSSIFSKRAHELKEEGNKRFQA
KDYVGALEQYENALKLTPKTHPDRAVFHSNRAACLMQMKPIDYDSVISECTMALLVQPSY
VRALLRRARAFEAVRKYEMAMQDVQILLGADPNHRDALEIAGRLRMALGPRPEAQQDLQS
RPSPAALGASAVGAAPIAGLGPCLPARPMSKKPAPLGGASAISVNNKPEKPYQVTPAENG
PQAKVQLPKVILKPANGPSRPHADLNKDGQREKASSSASSVVHGHSKDVAIRWRPLKLVY
DHDIRLAQMPVTCSFKVLRDIVGKRFPMSKSVLVKYKDSDGDLVTITCTAELRSAESWVD
GLLPKDPDADKTDAIGMLRLHVVEVSPEQEPALLEEEEEKPVESEGSKGDDSGSHSSISD
SVVETVDNESNKAEKVTIKEKAATTENPDCKEVEMDDWLFEFAQLFRTHVGIDPDAHIDL
HELGMELCSEALEETVTSEEAQVLFDKAALKFQEVAALAFFNWGNVHMCSARKRIPIDDS
ASKEMMATQLQAAYDWVKEKYSLAKEKYEEALLIKPDFYEGLLALGQQQFEMAKLYWSFI
LAKKEDLSNWDPTETLALFDSAELKMKAATEMWEKIEEQRANELKDPSASKKDELLRRRK
KQTSGPEGEASAAGGPAEISADEAAEQAAVMRSQIHLFWGNMLFERSQVECKLALAGWKK
NLDTAVERFKLAGASESDISTVLKNHCSNEEAAEGSKQMVESLNTDEGANHKNDASQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400043113
Transcript Infomation

pacid=37427378 locus=PGSC0003DMG400016728 ID=PGSC0003DMT400043113.v4.03 annot-version=v4.03
Sequence

ATGGGGAAATCAGGTGGTAGGAAAAAGAAGGCGGGTGTTAGTCAAAATCAAAACCAGAAC
CAAGGGGCTGTTGGGAATAGCCATACACCTGTTGTTAATGGTAGTGTTGATTTGGACTCA
TCAATTTTCTCAAAAAGAGCCCATGAGCTGAAGGAAGAAGGAAACAAAAGGTTTCAGGCT
AAGGATTATGTGGGTGCCCTGGAGCAATATGAGAATGCTCTCAAACTTACACCAAAGACA
CACCCTGATAGAGCTGTTTTTCATAGCAATAGGGCAGCCTGTTTGATGCAAATGAAGCCC
ATAGACTATGATTCTGTTATTTCTGAATGTACTATGGCACTTCTGGTTCAGCCCTCTTAT
GTTCGGGCCCTTCTACGAAGGGCTCGTGCATTTGAGGCTGTGAGGAAGTATGAAATGGCG
ATGCAAGATGTCCAGATACTATTGGGTGCTGATCCAAATCACCGAGATGCTTTGGAGATT
GCTGGACGATTGAGGATGGCACTTGGTCCTCGTCCAGAGGCCCAGCAGGACCTCCAAAGC
CGCCCATCTCCAGCTGCACTTGGTGCTTCTGCAGTGGGTGCAGCTCCTATTGCTGGCTTA
GGGCCATGCTTACCTGCTCGGCCAATGTCTAAGAAGCCAGCACCTTTAGGTGGGGCTTCA
GCTATATCAGTTAATAACAAGCCTGAGAAGCCATATCAAGTTACGCCAGCTGAAAATGGT
CCTCAAGCCAAAGTTCAGTTACCAAAGGTTATTTTGAAGCCTGCAAATGGTCCTTCCAGA
CCACATGCTGATCTCAATAAGGATGGCCAAAGAGAGAAGGCATCTTCATCAGCATCTAGT
GTTGTTCATGGACATTCTAAAGATGTTGCCATTCGTTGGAGGCCATTGAAGCTTGTTTAT
GATCATGATATAAGGCTTGCCCAGATGCCTGTGACTTGCAGTTTTAAAGTGTTGAGGGAT
ATTGTTGGCAAACGGTTCCCTATGTCAAAATCTGTTCTTGTTAAATATAAGGACAGTGAT
GGTGATTTAGTAACTATTACCTGTACGGCTGAACTTAGATCGGCAGAGTCTTGGGTTGAT
GGTTTACTGCCAAAAGACCCTGATGCAGATAAAACCGACGCCATTGGGATGTTAAGGTTG
CACGTCGTTGAGGTGAGTCCTGAACAAGAGCCAGCCTTGTTGGAAGAGGAAGAGGAGAAG
CCTGTCGAGAGCGAAGGGAGCAAAGGGGATGATAGTGGATCCCATTCTTCAATAAGTGAT
TCGGTGGTTGAAACTGTGGATAATGAGAGCAATAAGGCAGAGAAGGTAACTATCAAAGAG
AAAGCGGCTACAACCGAAAATCCTGACTGCAAAGAGGTTGAAATGGATGACTGGCTTTTC
GAGTTTGCTCAGTTATTCAGGACCCATGTAGGCATCGATCCAGATGCTCACATTGATCTG
CATGAGCTTGGGATGGAGCTTTGCTCTGAAGCCCTTGAGGAAACTGTGACAAGTGAAGAG
GCTCAAGTTCTTTTCGACAAGGCTGCCTTAAAATTTCAGGAGGTTGCAGCTCTTGCTTTC
TTCAACTGGGGAAATGTTCACATGTGCTCAGCAAGGAAAAGAATTCCAATCGATGATTCT
GCTTCAAAGGAGATGATGGCTACACAACTCCAAGCAGCATATGACTGGGTGAAAGAAAAA
TATTCTCTGGCCAAAGAGAAGTATGAGGAGGCACTCTTAATCAAACCAGACTTTTATGAG
GGGTTACTGGCATTGGGGCAGCAGCAATTTGAAATGGCAAAACTTTACTGGTCCTTTATC
TTGGCTAAGAAAGAGGACCTATCAAATTGGGATCCTACTGAGACTCTTGCACTCTTTGAC
AGTGCAGAATTAAAAATGAAAGCTGCAACAGAAATGTGGGAGAAAATTGAAGAGCAGAGA
GCTAATGAGCTAAAGGATCCTAGCGCCAGCAAGAAGGATGAATTATTAAGGAGAAGGAAG
AAGCAAACAAGTGGTCCTGAAGGTGAGGCGTCAGCTGCTGGTGGTCCAGCTGAAATTTCA
GCTGACGAGGCCGCAGAGCAAGCTGCTGTTATGAGATCGCAGATCCATTTATTTTGGGGT
AATATGCTCTTTGAGCGCTCTCAAGTTGAATGCAAGTTGGCTTTGGCTGGTTGGAAGAAA
AACCTTGATACAGCAGTTGAGCGATTCAAGCTTGCTGGAGCTTCTGAAAGTGACATCTCA
ACAGTTTTGAAGAACCATTGTTCCAATGAGGAAGCTGCAGAGGGATCTAAGCAAATGGTT
GAGAGCTTGAACACTGATGAAGGTGCAAATCATAAGAATGATGCTAGTCAAGCTTAG