Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043112
CDS Infomation

pacid=37428919 polypeptide=PGSC0003DMP400029248 locus=PGSC0003DMG400016727 ID=PGSC0003DMT400043112.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCATCTCTTCTCTCAATCAAATTCCTTGCAGAACTCTCCAAATTACATCCCAA
TATTCAAAACCCACATCCAAAATCTCAACCTTACCCATCTCCTCCACGAATTTCCCATCA
AAAACAGAACAACACAGATCAATTTCAGTCAAAGAATTCACAAACCCAAAACCAAAATTC
ACAGCTCAAGCCACAAATTACGACAAGGAAGATGAGTGGGGGCCGGAAGTGGAGCAAATA
AGGCCGGGTGGAGTAGCGGTTGTGGAAGAAGAACCACCTAAGGAGCCAAGTGAAATTGAG
TTGCTGAAGAAGCAATTGGCGGATTCTTTATATGGAACCAATAGAGGTTTGAGTGCTAGC
AGTGAGACTAGGGCGGAAATCGTTGAACTCATCACTCAGCTTGAGTCGAAGAACCCTAAT
CCAGCACCTACGGAAGCCTTGACTCTTCTCAACGGCAAATGGATTCTTGCGTACACATCT
TTCTCTGGTTTGTTTCCTTTGTTGTCAAAGGGCAATCTGCCTCTGGTTCGAGTTGAGGAG
ATTTCCCAGACCATCGATTCTGAGAGTTTCACTGTCCAAAACTCTGTTGTCTTTGCTGGA
CCTTTAGCTACAACTTCCATTAGTACCAATGCCAAATTCGAAGTCAGAAGTCCAAAACGT
GTCCAGATTAAATTTGAAGAAGGCATAATTGGAACACCCCAGTTGACAGATTCCATCGTA
TTGCCTGAGAACGTCGAATTCTTGGGACAAAAGATTGATCTAAGCCCCTTCAAAGGCTTG
ATTACTTCAGTCCAAGACACAGCTTCCTCAGTGGCCAAGTCCATTTCAAGTCAACCACCA
ATTAAGTTTCCTATTACCAACAACAATGCACAATCATGGCTGCTGACAACATACTTGGAT
GATGAGCTTAGGATCTCCAGAGGAGATGCTGGCAGTGTTTTTGTGTTGATCAAGGAAGGC
AGTCCCCTCTTGAAGCCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029248
PEP Infomation

pacid=37428919 transcript=PGSC0003DMT400043112 locus=PGSC0003DMG400016727 ID=PGSC0003DMT400043112.v4.03 annot-version=v4.03
Sequence

MASISSLNQIPCRTLQITSQYSKPTSKISTLPISSTNFPSKTEQHRSISVKEFTNPKPKF
TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS
SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSKGNLPLVRVEE
ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV
LPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLD
DELRISRGDAGSVFVLIKEGSPLLKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400043112
Transcript Infomation

pacid=37428919 locus=PGSC0003DMG400016727 ID=PGSC0003DMT400043112.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCATCTCTTCTCTCAATCAAATTCCTTGCAGAACTCTCCAAATTACATCCCAA
TATTCAAAACCCACATCCAAAATCTCAACCTTACCCATCTCCTCCACGAATTTCCCATCA
AAAACAGAACAACACAGATCAATTTCAGTCAAAGAATTCACAAACCCAAAACCAAAATTC
ACAGCTCAAGCCACAAATTACGACAAGGAAGATGAGTGGGGGCCGGAAGTGGAGCAAATA
AGGCCGGGTGGAGTAGCGGTTGTGGAAGAAGAACCACCTAAGGAGCCAAGTGAAATTGAG
TTGCTGAAGAAGCAATTGGCGGATTCTTTATATGGAACCAATAGAGGTTTGAGTGCTAGC
AGTGAGACTAGGGCGGAAATCGTTGAACTCATCACTCAGCTTGAGTCGAAGAACCCTAAT
CCAGCACCTACGGAAGCCTTGACTCTTCTCAACGGCAAATGGATTCTTGCGTACACATCT
TTCTCTGGTTTGTTTCCTTTGTTGTCAAAGGGCAATCTGCCTCTGGTTCGAGTTGAGGAG
ATTTCCCAGACCATCGATTCTGAGAGTTTCACTGTCCAAAACTCTGTTGTCTTTGCTGGA
CCTTTAGCTACAACTTCCATTAGTACCAATGCCAAATTCGAAGTCAGAAGTCCAAAACGT
GTCCAGATTAAATTTGAAGAAGGCATAATTGGAACACCCCAGTTGACAGATTCCATCGTA
TTGCCTGAGAACGTCGAATTCTTGGGACAAAAGATTGATCTAAGCCCCTTCAAAGGCTTG
ATTACTTCAGTCCAAGACACAGCTTCCTCAGTGGCCAAGTCCATTTCAAGTCAACCACCA
ATTAAGTTTCCTATTACCAACAACAATGCACAATCATGGCTGCTGACAACATACTTGGAT
GATGAGCTTAGGATCTCCAGAGGAGATGCTGGCAGTGTTTTTGTGTTGATCAAGGAAGGC
AGTCCCCTCTTGAAGCCTTAA