Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043110
CDS Infomation

pacid=37425379 polypeptide=PGSC0003DMP400029246 locus=PGSC0003DMG400016725 ID=PGSC0003DMT400043110.v4.03 annot-version=v4.03
Sequence

ATGGAAGATCCTGAAAGGCTTACATCATGCAACAGTGGAACAAGGAGAATTAGCTCCGAC
TCTATCCATTCACCCGAATTCGAATTTTGGATGGTCCGAAACCCATCATTTCCTCAGCCT
AATCAGCTCTCTGCCGATGAGCTCTTCTCCGATGGCATCCTTCTCCCTTTAGACCTCCTT
CAAAATGACCCAAATGCTATTTCGCCTGAACCGTCCGGGTCCGGCCGATCCGAAACTGAT
TCTGGAGGGGAGCCTTCTGCTGCGATAGTCAACTCGTCCGCCGGAGGAGCTTCTTTCACC
TCCTCGAAGCGATGGAAGGATATTTTCAAGAAAACTGACAAGAAAGATAGTAATGAGGAG
AGTTGTAGAGAGAAGAAAAAGGACAAGAAGAAAGAGAAAAAACTTGTTGGGGGAAGCAAT
GGGGTGACTGGGGCTGAGCTCAATATTAATATTTGGCCCTTTTCGAGGAGTAGATCCGCC
GGAAATGGAGGAAGTAGACCTCGGGTTACGGGTGGATCCGGATTAGCGACCCGAAAGGTA
AGTAGTGCTCCGTGTTCCCGGAGCAACTCCGCCGGTGAATCCAAGTCACGGAAATGGCCC
AGTAGTCCCAGCCGTGGTGGGGTTCATTTGGGCCGGAGCAGCCCAGTTTGGCAGGTACGA
CGGAGCTCCGTTAACTCAGGATCCGGTAGCCGGAGCTCCGATAACCTCGTGAGAACTAAT
GAAAAATCAATTAGAAAAGAAGCCCCCCAGAAAGAAAGCAGCACCAAAAAGGTAGTTATT
AAAAAAGAAGGCGTTGAAGGCCGCCGGAAATGGTCGTCAGCGGCGGCCGGCGGTGGGCCT
AAAACTAGAGTCTTAAACTTGAATGTCCCTATGTGCATTGGTTACAGGAATCAGTTAGGT
TGCAGAAGTGATGAAAATAGTGCCATCAATATCGCCGCCACCGCCAACGGAGGAGTCGTT
GGTGATCAGAGTGGTAGCAGCACGGTGACCGGTGAAGGGGTACGTGGCAGTAACTTATTT
AATATCAAAAGCCTATTTACTAAGAAAGTATATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029246
PEP Infomation

pacid=37425379 transcript=PGSC0003DMT400043110 locus=PGSC0003DMG400016725 ID=PGSC0003DMT400043110.v4.03 annot-version=v4.03
Sequence

MEDPERLTSCNSGTRRISSDSIHSPEFEFWMVRNPSFPQPNQLSADELFSDGILLPLDLL
QNDPNAISPEPSGSGRSETDSGGEPSAAIVNSSAGGASFTSSKRWKDIFKKTDKKDSNEE
SCREKKKDKKKEKKLVGGSNGVTGAELNINIWPFSRSRSAGNGGSRPRVTGGSGLATRKV
SSAPCSRSNSAGESKSRKWPSSPSRGGVHLGRSSPVWQVRRSSVNSGSGSRSSDNLVRTN
EKSIRKEAPQKESSTKKVVIKKEGVEGRRKWSSAAAGGGPKTRVLNLNVPMCIGYRNQLG
CRSDENSAINIAATANGGVVGDQSGSSTVTGEGVRGSNLFNIKSLFTKKVY*

Transcript Sequence

Transcript ID

PGSC0003DMT400043110
Transcript Infomation

pacid=37425379 locus=PGSC0003DMG400016725 ID=PGSC0003DMT400043110.v4.03 annot-version=v4.03
Sequence

ATGGAAGATCCTGAAAGGCTTACATCATGCAACAGTGGAACAAGGAGAATTAGCTCCGAC
TCTATCCATTCACCCGAATTCGAATTTTGGATGGTCCGAAACCCATCATTTCCTCAGCCT
AATCAGCTCTCTGCCGATGAGCTCTTCTCCGATGGCATCCTTCTCCCTTTAGACCTCCTT
CAAAATGACCCAAATGCTATTTCGCCTGAACCGTCCGGGTCCGGCCGATCCGAAACTGAT
TCTGGAGGGGAGCCTTCTGCTGCGATAGTCAACTCGTCCGCCGGAGGAGCTTCTTTCACC
TCCTCGAAGCGATGGAAGGATATTTTCAAGAAAACTGACAAGAAAGATAGTAATGAGGAG
AGTTGTAGAGAGAAGAAAAAGGACAAGAAGAAAGAGAAAAAACTTGTTGGGGGAAGCAAT
GGGGTGACTGGGGCTGAGCTCAATATTAATATTTGGCCCTTTTCGAGGAGTAGATCCGCC
GGAAATGGAGGAAGTAGACCTCGGGTTACGGGTGGATCCGGATTAGCGACCCGAAAGGTA
AGTAGTGCTCCGTGTTCCCGGAGCAACTCCGCCGGTGAATCCAAGTCACGGAAATGGCCC
AGTAGTCCCAGCCGTGGTGGGGTTCATTTGGGCCGGAGCAGCCCAGTTTGGCAGGTACGA
CGGAGCTCCGTTAACTCAGGATCCGGTAGCCGGAGCTCCGATAACCTCGTGAGAACTAAT
GAAAAATCAATTAGAAAAGAAGCCCCCCAGAAAGAAAGCAGCACCAAAAAGGTAGTTATT
AAAAAAGAAGGCGTTGAAGGCCGCCGGAAATGGTCGTCAGCGGCGGCCGGCGGTGGGCCT
AAAACTAGAGTCTTAAACTTGAATGTCCCTATGTGCATTGGTTACAGGAATCAGTTAGGT
TGCAGAAGTGATGAAAATAGTGCCATCAATATCGCCGCCACCGCCAACGGAGGAGTCGTT
GGTGATCAGAGTGGTAGCAGCACGGTGACCGGTGAAGGGGTACGTGGCAGTAACTTATTT
AATATCAAAAGCCTATTTACTAAGAAAGTATATTAA