Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043094
CDS Infomation

pacid=37425323 polypeptide=PGSC0003DMP400029235 locus=PGSC0003DMG400016717 ID=PGSC0003DMT400043094.v4.03 annot-version=v4.03
Sequence

ATGGGTGAAGAACACTTGACATTTGATCCTTCTGATAGAGCTGTTGAACAGGCAATAGTT
GCATTGAAGAAGGGGGCACATCTTTTGAAGTATGGCAGAAGAGGGAAGCCCAAATTCTAC
CCTCTAAGGTTATCCGCGGATGAAAAGTTTTTGATTTGGTATTCCGGTGAGAAGGAAAAC
CAACTGAGGTTAAGTTCAATCACAAATGTCATCCGCGGCCAAAGTACTGTAATTCTTCAG
CCTGAAATGGAAAGTCAATGCATATCACTTATATATGGAAATGGCGAGCGCACTCTTGAT
CTGATTTGCAAGGATCAAATGCAGGCAGAGACTTGGTTTGTAGGCTTGCGAGCTGTAATA
TCCAGGACTCACCATCACAGAATGGTGGACTCTCTGAAAAGCAAAAGAGGTGCACACAGT
TGCATCAGTAGTCCAGCGGGTTATATGCGGAGGAAACAGAATCTTGGACTTTCAGCAAAG
ACAATCAGACTGTCTCAGGTTCGCAGCTTAGCGGGGAGTCCCACTCAGTCATTTTCAGAA
AGATGTTTTACTGATGGCTTATCCTGTACTTCCGAAAGCTTTTTCTCGGAGTCAAGCCTA
TCGAATGTAATGGATAATTTTACATCATGTTCGTCATATTTTGAACCAGATGACTTAAGC
CAGACGAGAGCATCTTGTGCTGGGACTGAAATCCAAACTGATATGCTAGCTCCACTTTTA
CCATCCAGTAATGAGTCAAGACCATTTGGAAAGAATGTACTGCGGGATGTTTTTATCTGG
GGAGAAGGAGCAGAAGGGGGGTGCTTGGGGGTTGGGGAAGTGAAGTTGGATGGTTTGTCA
CCCAAACTTCTCGAGTCCACTGTGATGCTTGATGTACAAGCAATATCCATTGGTAGGAGT
CATGCTTCCATAGTCACCAAACAGGGTGAAGTTTTTTGCTGGGGTGAAGGAAAGAATGGA
CGGCTTGGGCATAAACATGATATGGACACTGCACGACCAAAACTGGTTGACTCTCTTAAC
GGGGTTCGGGTAAAATCTGTCTCTTGTGGGGAATACCAAACATGTGCCCTGACCTTTTCT
GGTGAACTATATACATGGGGTGACAACTCTTTTTGTGCTGAGTTAGTAGGTGAGGAAAAG
AAGAGAAGCCATTGGCTACCAAACAGAGTATGTGGTTCTCTGGATGGTGTAAAAATCTCT
TATGTTGCTTGTGCGGAATGGCACACCGCAATTGTTTCAACATCTGGGCAATTGTTTACT
TATGGAGATGGAACTTTTGGGGTTCTTGGTCATGGAAATCTCCAAAGTGTTGCTCAGCCC
AAAGAAGTTGAGTCACTTAGAGGTTTGTGGGTCAAATGTGTTGCATGTGGGCCATGGCAT
ACAGCTGCGGTAGTGGAAGTCATTGTTGATCGTCTTAAATTCAACAATCCAGGTGGAAAG
CTATTTACATGGGGTGACGGAGATAAAGGAAGGCTTGGTCATCCTGGTGAGGAGACAAAG
CTCTTACCGACCTGTGTGGCAAAACTTGTTGAGCATGATTTCATTCAAGTTTCCTGTGCA
AGCACCCTAACTATTGCACTATCTAGCACAGGAAAAGTTTATATGATGGGAAGTGCAGTG
CATGGGCAACTAGGCAATCCAGAAGCCAAAGATAAATCATTAGTGCTTGTGCAAGGAAAA
CTTAGAGAGGAGTTTATTACAGAGATATCCTCGGGATCATATCATGTTACTGTGCTAACA
TCAAGGGGAAGTGTTTACACATGGGGGAAAGGAGCAAATGGACAGTTAGGATTAGGTGAT
ACAAAAGATAGAAGTTGGCCAACTTTAGTTGAATCACTGAGAGACAGGCAGGTGGAACAT
ATTGCTTGTGGGTCAAGTACTACAGCAGCAATATGTTTGCACAAGTCTGCATCTAGTACT
GATCAATCATCTTGCAAAGGATGTAACATGTCTTTTGGAATTACGAGGAAGAAACAAAAC
TGTTACAATTGTGGCCTTCTCTTCTGCCGCACATGCTGCAGCAAGAAAACCCCAAATGCC
TCTCTGGCCCCTGACAAGACTAAAGCTTTTCGGGTATGTGATCCATGTTTTTACCAACTT
CAGAGGATTGCTCAGTCAAGCAGGTCATCAAAGCTTGAAAACCATAGTCCAAGACCCTTA
CCGATTACCCTAAAGGCAGTTACTTGCGAGAAAGTAGAGCGAGACGAGGCAAATACTACA
TCAAGTCGAATGATGGCAACAAGAAAATATCTAACTGAGAACAATCAATGTTTTGACAGG
AGGTCTGCCAACAGTCTAGGGGAAAGTAGGCAGTTCTCTGATCCTGTTACGTCCTTGCTG
GATACTTTTCCAAGATGGGGCCAAGTTCCTTGTCCTAAAGTCTTTAGAAGAGACTATGGA
CAGATGAGAACCCAAAATGCTCATGCGAGGAATTCGCTGGCTTCAGCCTCTCCAACTTAT
TTCGTAGAACCAAAATTTGTCCCCTCTGCTGGTCTAAATATGGAGGAAGACTTGAAAGAA
TCAGACAAGATCCTACTCGAAGAAGTTTGCAAGCTAAGAACTCAGGTTGAAAGTCTTGAA
AGGTTATGTGAAACAAGAAAGGAGAAAATTCAAGAGTGTCAACAAAAAGTTAAAGAGGCC
TGGTCAGTGGCTAAAGAGGAAGCTTCTAAGAGTAAAGCAGCAAAAGAAGTTATAAAAGCT
TTGACATCAAGGCTTCAGGCAATGTCAGAAAGCTTTTTTGCTGAAGCAGAAGCTAATGTT
CAAGCTATTGCAAATGTACTGCAGACAACATCAACATATTCAGATAGCCAAAATCATATA
GGTGGACACCGAATTGTTGTGCCTCTTGCAAACGCACAACTAGAGGAGAGAAATGTTGAT
AGCCTATGTGGTTCTCCAATTGTATTCTCTAGTACTTTAAGATCCTTCTATAACAAAGAA
AACAACGTGGACTCCCGGTCAGCAGAAGAATCTTGTAGAGAAGCTGATCATGGCCAAGCT
GGGCTCAGAACATCAAAAGTTGAATGGGTGGAACAATATCAGCTCGGTGTTTTCATCACA
TTGACAGTGCTGCCAAGTGGAAAGAAGGGACTCAAGCGAGTCAGGTTCAGTAGGAAAAAG
TTTACTGAAAAGGAAGCAAAGAAGTGGTGGGAAGAAAATCAGCTTTCTGTGTACAAAAAG
TATGATGTTGAAGGATATGAAAATGTGAACCAAGTTTTGCTGAAGAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029235
PEP Infomation

pacid=37425323 transcript=PGSC0003DMT400043094 locus=PGSC0003DMG400016717 ID=PGSC0003DMT400043094.v4.03 annot-version=v4.03
Sequence

MGEEHLTFDPSDRAVEQAIVALKKGAHLLKYGRRGKPKFYPLRLSADEKFLIWYSGEKEN
QLRLSSITNVIRGQSTVILQPEMESQCISLIYGNGERTLDLICKDQMQAETWFVGLRAVI
SRTHHHRMVDSLKSKRGAHSCISSPAGYMRRKQNLGLSAKTIRLSQVRSLAGSPTQSFSE
RCFTDGLSCTSESFFSESSLSNVMDNFTSCSSYFEPDDLSQTRASCAGTEIQTDMLAPLL
PSSNESRPFGKNVLRDVFIWGEGAEGGCLGVGEVKLDGLSPKLLESTVMLDVQAISIGRS
HASIVTKQGEVFCWGEGKNGRLGHKHDMDTARPKLVDSLNGVRVKSVSCGEYQTCALTFS
GELYTWGDNSFCAELVGEEKKRSHWLPNRVCGSLDGVKISYVACAEWHTAIVSTSGQLFT
YGDGTFGVLGHGNLQSVAQPKEVESLRGLWVKCVACGPWHTAAVVEVIVDRLKFNNPGGK
LFTWGDGDKGRLGHPGEETKLLPTCVAKLVEHDFIQVSCASTLTIALSSTGKVYMMGSAV
HGQLGNPEAKDKSLVLVQGKLREEFITEISSGSYHVTVLTSRGSVYTWGKGANGQLGLGD
TKDRSWPTLVESLRDRQVEHIACGSSTTAAICLHKSASSTDQSSCKGCNMSFGITRKKQN
CYNCGLLFCRTCCSKKTPNASLAPDKTKAFRVCDPCFYQLQRIAQSSRSSKLENHSPRPL
PITLKAVTCEKVERDEANTTSSRMMATRKYLTENNQCFDRRSANSLGESRQFSDPVTSLL
DTFPRWGQVPCPKVFRRDYGQMRTQNAHARNSLASASPTYFVEPKFVPSAGLNMEEDLKE
SDKILLEEVCKLRTQVESLERLCETRKEKIQECQQKVKEAWSVAKEEASKSKAAKEVIKA
LTSRLQAMSESFFAEAEANVQAIANVLQTTSTYSDSQNHIGGHRIVVPLANAQLEERNVD
SLCGSPIVFSSTLRSFYNKENNVDSRSAEESCREADHGQAGLRTSKVEWVEQYQLGVFIT
LTVLPSGKKGLKRVRFSRKKFTEKEAKKWWEENQLSVYKKYDVEGYENVNQVLLKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400043094
Transcript Infomation

pacid=37425323 locus=PGSC0003DMG400016717 ID=PGSC0003DMT400043094.v4.03 annot-version=v4.03
Sequence

ATGGGTGAAGAACACTTGACATTTGATCCTTCTGATAGAGCTGTTGAACAGGCAATAGTT
GCATTGAAGAAGGGGGCACATCTTTTGAAGTATGGCAGAAGAGGGAAGCCCAAATTCTAC
CCTCTAAGGTTATCCGCGGATGAAAAGTTTTTGATTTGGTATTCCGGTGAGAAGGAAAAC
CAACTGAGGTTAAGTTCAATCACAAATGTCATCCGCGGCCAAAGTACTGTAATTCTTCAG
CCTGAAATGGAAAGTCAATGCATATCACTTATATATGGAAATGGCGAGCGCACTCTTGAT
CTGATTTGCAAGGATCAAATGCAGGCAGAGACTTGGTTTGTAGGCTTGCGAGCTGTAATA
TCCAGGACTCACCATCACAGAATGGTGGACTCTCTGAAAAGCAAAAGAGGTGCACACAGT
TGCATCAGTAGTCCAGCGGGTTATATGCGGAGGAAACAGAATCTTGGACTTTCAGCAAAG
ACAATCAGACTGTCTCAGGTTCGCAGCTTAGCGGGGAGTCCCACTCAGTCATTTTCAGAA
AGATGTTTTACTGATGGCTTATCCTGTACTTCCGAAAGCTTTTTCTCGGAGTCAAGCCTA
TCGAATGTAATGGATAATTTTACATCATGTTCGTCATATTTTGAACCAGATGACTTAAGC
CAGACGAGAGCATCTTGTGCTGGGACTGAAATCCAAACTGATATGCTAGCTCCACTTTTA
CCATCCAGTAATGAGTCAAGACCATTTGGAAAGAATGTACTGCGGGATGTTTTTATCTGG
GGAGAAGGAGCAGAAGGGGGGTGCTTGGGGGTTGGGGAAGTGAAGTTGGATGGTTTGTCA
CCCAAACTTCTCGAGTCCACTGTGATGCTTGATGTACAAGCAATATCCATTGGTAGGAGT
CATGCTTCCATAGTCACCAAACAGGGTGAAGTTTTTTGCTGGGGTGAAGGAAAGAATGGA
CGGCTTGGGCATAAACATGATATGGACACTGCACGACCAAAACTGGTTGACTCTCTTAAC
GGGGTTCGGGTAAAATCTGTCTCTTGTGGGGAATACCAAACATGTGCCCTGACCTTTTCT
GGTGAACTATATACATGGGGTGACAACTCTTTTTGTGCTGAGTTAGTAGGTGAGGAAAAG
AAGAGAAGCCATTGGCTACCAAACAGAGTATGTGGTTCTCTGGATGGTGTAAAAATCTCT
TATGTTGCTTGTGCGGAATGGCACACCGCAATTGTTTCAACATCTGGGCAATTGTTTACT
TATGGAGATGGAACTTTTGGGGTTCTTGGTCATGGAAATCTCCAAAGTGTTGCTCAGCCC
AAAGAAGTTGAGTCACTTAGAGGTTTGTGGGTCAAATGTGTTGCATGTGGGCCATGGCAT
ACAGCTGCGGTAGTGGAAGTCATTGTTGATCGTCTTAAATTCAACAATCCAGGTGGAAAG
CTATTTACATGGGGTGACGGAGATAAAGGAAGGCTTGGTCATCCTGGTGAGGAGACAAAG
CTCTTACCGACCTGTGTGGCAAAACTTGTTGAGCATGATTTCATTCAAGTTTCCTGTGCA
AGCACCCTAACTATTGCACTATCTAGCACAGGAAAAGTTTATATGATGGGAAGTGCAGTG
CATGGGCAACTAGGCAATCCAGAAGCCAAAGATAAATCATTAGTGCTTGTGCAAGGAAAA
CTTAGAGAGGAGTTTATTACAGAGATATCCTCGGGATCATATCATGTTACTGTGCTAACA
TCAAGGGGAAGTGTTTACACATGGGGGAAAGGAGCAAATGGACAGTTAGGATTAGGTGAT
ACAAAAGATAGAAGTTGGCCAACTTTAGTTGAATCACTGAGAGACAGGCAGGTGGAACAT
ATTGCTTGTGGGTCAAGTACTACAGCAGCAATATGTTTGCACAAGTCTGCATCTAGTACT
GATCAATCATCTTGCAAAGGATGTAACATGTCTTTTGGAATTACGAGGAAGAAACAAAAC
TGTTACAATTGTGGCCTTCTCTTCTGCCGCACATGCTGCAGCAAGAAAACCCCAAATGCC
TCTCTGGCCCCTGACAAGACTAAAGCTTTTCGGGTATGTGATCCATGTTTTTACCAACTT
CAGAGGATTGCTCAGTCAAGCAGGTCATCAAAGCTTGAAAACCATAGTCCAAGACCCTTA
CCGATTACCCTAAAGGCAGTTACTTGCGAGAAAGTAGAGCGAGACGAGGCAAATACTACA
TCAAGTCGAATGATGGCAACAAGAAAATATCTAACTGAGAACAATCAATGTTTTGACAGG
AGGTCTGCCAACAGTCTAGGGGAAAGTAGGCAGTTCTCTGATCCTGTTACGTCCTTGCTG
GATACTTTTCCAAGATGGGGCCAAGTTCCTTGTCCTAAAGTCTTTAGAAGAGACTATGGA
CAGATGAGAACCCAAAATGCTCATGCGAGGAATTCGCTGGCTTCAGCCTCTCCAACTTAT
TTCGTAGAACCAAAATTTGTCCCCTCTGCTGGTCTAAATATGGAGGAAGACTTGAAAGAA
TCAGACAAGATCCTACTCGAAGAAGTTTGCAAGCTAAGAACTCAGGTTGAAAGTCTTGAA
AGGTTATGTGAAACAAGAAAGGAGAAAATTCAAGAGTGTCAACAAAAAGTTAAAGAGGCC
TGGTCAGTGGCTAAAGAGGAAGCTTCTAAGAGTAAAGCAGCAAAAGAAGTTATAAAAGCT
TTGACATCAAGGCTTCAGGCAATGTCAGAAAGCTTTTTTGCTGAAGCAGAAGCTAATGTT
CAAGCTATTGCAAATGTACTGCAGACAACATCAACATATTCAGATAGCCAAAATCATATA
GGTGGACACCGAATTGTTGTGCCTCTTGCAAACGCACAACTAGAGGAGAGAAATGTTGAT
AGCCTATGTGGTTCTCCAATTGTATTCTCTAGTACTTTAAGATCCTTCTATAACAAAGAA
AACAACGTGGACTCCCGGTCAGCAGAAGAATCTTGTAGAGAAGCTGATCATGGCCAAGCT
GGGCTCAGAACATCAAAAGTTGAATGGGTGGAACAATATCAGCTCGGTGTTTTCATCACA
TTGACAGTGCTGCCAAGTGGAAAGAAGGGACTCAAGCGAGTCAGGTTCAGTAGGAAAAAG
TTTACTGAAAAGGAAGCAAAGAAGTGGTGGGAAGAAAATCAGCTTTCTGTGTACAAAAAG
TATGATGTTGAAGGATATGAAAATGTGAACCAAGTTTTGCTGAAGAAGTAG