Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043091
CDS Infomation

pacid=37426363 polypeptide=PGSC0003DMP400029233 locus=PGSC0003DMG400016716 ID=PGSC0003DMT400043091.v4.03 annot-version=v4.03
Sequence

ATGGAGAACTCTCTCTTTCTAACCTTTTCTTCATTTCTTTTTGTTATCCATTTTGTTCCA
TTGGCAGCCTCAACACCATCATACTTGAGTTTCCTTCAGTGCTTATCCAAACATTCACAT
CCATCTGACCACATACTGTCAAGAGTGTACACTCCAAACAACTCCTCATACAAGTCTGTG
CTACAACACTATATCAGAAACCAGAGGTTCAATAGATCAACCACTCCAAAACCCGACATT
ATTTTCACTCCGTTACAAGAATCTCATGTCCAGGTTGCTGTCACTTGCTGCAGGAAAACC
GACAAGTACCTAAAGATCCGAAGTGGAGGGCATGACTACGAAGGCATTTCTTATGTCTCC
AACATCAGTTTTGTTCTTCTTGACATGTCTAACCTGCGTTCAATTGATGTAGATATCCAA
AATGAAACTGCTTGGGTCCAAGCTGGTGCACTTCTAGGCGAACTTTACTACAGAATTTGG
GAGAAAAGCAAAGTCCATGCCTTCCCAGCTGGTGTTTGCCCAACTGTTGGTGTTGGTGGA
CACATAACTGGAGGAGGATACGGTAACCTGTTAAGAAAATATGGACTGTCAGTTGACAAT
TTGATTGATGCGCACATAGTAGATGTTCATGGAAGAATTCTTAACAGAGGATCAATGGGA
GAAGACCTATTTTGGGCGATCAGAGGTGGGTGTGGTGCTAGCTTTGGAGTGATATCGGCT
TACAAACTTAGGCTGGTAAAAGTTCCTGATGTTGTTACTGTTTTCCGGGTAGTGAGGACC
CTGGAAGAAACTGCAATTGACATTGTTTACTGGTGGCAATTCATTGCAGAGAAAATAGAT
AGCAATCTCTTTATAAGGTTAGCTCTAAAACCTATTGATGAGAAGCAAAAAGGAACTAAG
ACAATTACAGCAACATTTGTAGCATTATTTCTTGGAGATTCCAGAGAACTTCTATCCATC
ATGGATAGGGATTTTCCTCAATTGGGTTTACATATTGAGGATTGCAAGGAAATGAGTTGG
ATAGAATCTGAGCTTTTCTGGGCAAGTTTTCCTAATGGAACACTGCCTGATGCTTTGCTC
AACCGAAAGCCTGGAGCAAAGTTTCTGAAGCGCAAGTCAGACTATTTGCAGAAACCCATT
CCCAAGGATAAGCTGAAATCTATATTCGATAAAATGATTGAATTAGGAGACACAGAGTTA
GTTTTCAATCAATATGGTGGAAGGATGAGTGAGATACCAGAATGGGAAACTCCATTTCCT
CACAGAGCAGGAAATATATTTAAAATCCAGTATGCAGCCAATTGGGGGAAAGAAGGAAAG
GAAGCAGAGAACTTCTATATAAACCAGACCAGAGTACTGTACAACTACATGACTCCTTTT
GTGTCAAAATCCCCGAGATGTGCATATTTAAATTATAGAGACCTTGACATAGGGGTCAAC
CATAATGGAAACAACCGCTATATTGAAGGTCGTGTTTATGGACTGAAGTATTTCAAGGAT
AATTTTAATAAATTGGTCAAAGTCAAGACTTTGGTTGATCCAGATAACTTCTTCTGGAAC
GAACAGAGCATCCCTCCTTTAGCAGCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029233
PEP Infomation

pacid=37426363 transcript=PGSC0003DMT400043091 locus=PGSC0003DMG400016716 ID=PGSC0003DMT400043091.v4.03 annot-version=v4.03
Sequence

MENSLFLTFSSFLFVIHFVPLAASTPSYLSFLQCLSKHSHPSDHILSRVYTPNNSSYKSV
LQHYIRNQRFNRSTTPKPDIIFTPLQESHVQVAVTCCRKTDKYLKIRSGGHDYEGISYVS
NISFVLLDMSNLRSIDVDIQNETAWVQAGALLGELYYRIWEKSKVHAFPAGVCPTVGVGG
HITGGGYGNLLRKYGLSVDNLIDAHIVDVHGRILNRGSMGEDLFWAIRGGCGASFGVISA
YKLRLVKVPDVVTVFRVVRTLEETAIDIVYWWQFIAEKIDSNLFIRLALKPIDEKQKGTK
TITATFVALFLGDSRELLSIMDRDFPQLGLHIEDCKEMSWIESELFWASFPNGTLPDALL
NRKPGAKFLKRKSDYLQKPIPKDKLKSIFDKMIELGDTELVFNQYGGRMSEIPEWETPFP
HRAGNIFKIQYAANWGKEGKEAENFYINQTRVLYNYMTPFVSKSPRCAYLNYRDLDIGVN
HNGNNRYIEGRVYGLKYFKDNFNKLVKVKTLVDPDNFFWNEQSIPPLAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400043091
Transcript Infomation

pacid=37426363 locus=PGSC0003DMG400016716 ID=PGSC0003DMT400043091.v4.03 annot-version=v4.03
Sequence

ATGGAGAACTCTCTCTTTCTAACCTTTTCTTCATTTCTTTTTGTTATCCATTTTGTTCCA
TTGGCAGCCTCAACACCATCATACTTGAGTTTCCTTCAGTGCTTATCCAAACATTCACAT
CCATCTGACCACATACTGTCAAGAGTGTACACTCCAAACAACTCCTCATACAAGTCTGTG
CTACAACACTATATCAGAAACCAGAGGTTCAATAGATCAACCACTCCAAAACCCGACATT
ATTTTCACTCCGTTACAAGAATCTCATGTCCAGGTTGCTGTCACTTGCTGCAGGAAAACC
GACAAGTACCTAAAGATCCGAAGTGGAGGGCATGACTACGAAGGCATTTCTTATGTCTCC
AACATCAGTTTTGTTCTTCTTGACATGTCTAACCTGCGTTCAATTGATGTAGATATCCAA
AATGAAACTGCTTGGGTCCAAGCTGGTGCACTTCTAGGCGAACTTTACTACAGAATTTGG
GAGAAAAGCAAAGTCCATGCCTTCCCAGCTGGTGTTTGCCCAACTGTTGGTGTTGGTGGA
CACATAACTGGAGGAGGATACGGTAACCTGTTAAGAAAATATGGACTGTCAGTTGACAAT
TTGATTGATGCGCACATAGTAGATGTTCATGGAAGAATTCTTAACAGAGGATCAATGGGA
GAAGACCTATTTTGGGCGATCAGAGGTGGGTGTGGTGCTAGCTTTGGAGTGATATCGGCT
TACAAACTTAGGCTGGTAAAAGTTCCTGATGTTGTTACTGTTTTCCGGGTAGTGAGGACC
CTGGAAGAAACTGCAATTGACATTGTTTACTGGTGGCAATTCATTGCAGAGAAAATAGAT
AGCAATCTCTTTATAAGGTTAGCTCTAAAACCTATTGATGAGAAGCAAAAAGGAACTAAG
ACAATTACAGCAACATTTGTAGCATTATTTCTTGGAGATTCCAGAGAACTTCTATCCATC
ATGGATAGGGATTTTCCTCAATTGGGTTTACATATTGAGGATTGCAAGGAAATGAGTTGG
ATAGAATCTGAGCTTTTCTGGGCAAGTTTTCCTAATGGAACACTGCCTGATGCTTTGCTC
AACCGAAAGCCTGGAGCAAAGTTTCTGAAGCGCAAGTCAGACTATTTGCAGAAACCCATT
CCCAAGGATAAGCTGAAATCTATATTCGATAAAATGATTGAATTAGGAGACACAGAGTTA
GTTTTCAATCAATATGGTGGAAGGATGAGTGAGATACCAGAATGGGAAACTCCATTTCCT
CACAGAGCAGGAAATATATTTAAAATCCAGTATGCAGCCAATTGGGGGAAAGAAGGAAAG
GAAGCAGAGAACTTCTATATAAACCAGACCAGAGTACTGTACAACTACATGACTCCTTTT
GTGTCAAAATCCCCGAGATGTGCATATTTAAATTATAGAGACCTTGACATAGGGGTCAAC
CATAATGGAAACAACCGCTATATTGAAGGTCGTGTTTATGGACTGAAGTATTTCAAGGAT
AATTTTAATAAATTGGTCAAAGTCAAGACTTTGGTTGATCCAGATAACTTCTTCTGGAAC
GAACAGAGCATCCCTCCTTTAGCAGCGTAA