Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043087
CDS Infomation

pacid=37426644 polypeptide=PGSC0003DMP400029229 locus=PGSC0003DMG400016714 ID=PGSC0003DMT400043087.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTAATTTCCCAGTTGTGGATATGGGGTTGCTTCAAACTGAGAAAAGGCCTGAA
GCAATGGACAAAATCAAAGATGCATGTGAAAACTGGGGTTTCTTTGAGGTTGTGAATCAT
GGGATTTCTCATGAATTGCTGGACACAGTGGAGAATTTAACTAAGGGGCATTACAAGAAG
TGCATGGAACAAAGGTTTAAAGAAATGGTGGCAAGTAAAGGACTTGAAGCTGTCCAAACT
GAAATTGATGATCTTGATTGGGAGAGCACTTTCTTCTTGAAGCATCTCCCTGTTTCCAAT
GTGTATGAAGTTCCTGACCTGGATGATGAATACAGGAAAGTTATGAAAGATTTTGCACTG
AAGCTAGAGAAACTAGCTGAAAATCTTTTGGATTTGCTGTGTGAGAATCTTGGACTAGAG
AAAGGTTATTTGAAAAAAGCATTTTATGGCTCAAAGGGTTCAACTTTTGGCACCAAAGTT
AGCAACTATCCTCCTTGTCCCAAGCCGGACTTGATCAAAGGCCTTCGCGCTCACACTGAT
GCTGGTGGCATCATCCTGCTTTTCCAAGATGACAAAGTCAGTGGTCTCCAATTGCTAAAA
GATGGCAGTTGGATTGATGTACCTCCTATGAAACACTCTATTGTCATCAACCTCGGCGAT
CAGCTTGAGGTGATTACTAATGGAACATACAAGAGTATTGAACACAGAGTGATTGCTCAA
CAAGATGGCACTAGGATGTCAATAGCTTCCTTTTATAATCCAGGAAGTGATGCTGTCATA
TTTCCAGCACCAGAGTTGATTGAGAAGACAGAAGAAGAGAACAAATTGAAGTATCCAAAA
TTTGTGTTTGAAGATTATATGAAGTTGTATGCAGGTCTCAAATTTCAGGCTAAGGAGCCT
AGGTTTGAAGCAATGAAGGCTGTGGAGACTACTGTCAACTTAGGTCCAATAGAAACTGTT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400029229
PEP Infomation

pacid=37426644 transcript=PGSC0003DMT400043087 locus=PGSC0003DMG400016714 ID=PGSC0003DMT400043087.v4.03 annot-version=v4.03
Sequence

MESNFPVVDMGLLQTEKRPEAMDKIKDACENWGFFEVVNHGISHELLDTVENLTKGHYKK
CMEQRFKEMVASKGLEAVQTEIDDLDWESTFFLKHLPVSNVYEVPDLDDEYRKVMKDFAL
KLEKLAENLLDLLCENLGLEKGYLKKAFYGSKGSTFGTKVSNYPPCPKPDLIKGLRAHTD
AGGIILLFQDDKVSGLQLLKDGSWIDVPPMKHSIVINLGDQLEVITNGTYKSIEHRVIAQ
QDGTRMSIASFYNPGSDAVIFPAPELIEKTEEENKLKYPKFVFEDYMKLYAGLKFQAKEP
RFEAMKAVETTVNLGPIETV*

Transcript Sequence

Transcript ID

PGSC0003DMT400043087
Transcript Infomation

pacid=37426644 locus=PGSC0003DMG400016714 ID=PGSC0003DMT400043087.v4.03 annot-version=v4.03
Sequence

ATGGAGAGTAATTTCCCAGTTGTGGATATGGGGTTGCTTCAAACTGAGAAAAGGCCTGAA
GCAATGGACAAAATCAAAGATGCATGTGAAAACTGGGGTTTCTTTGAGGTTGTGAATCAT
GGGATTTCTCATGAATTGCTGGACACAGTGGAGAATTTAACTAAGGGGCATTACAAGAAG
TGCATGGAACAAAGGTTTAAAGAAATGGTGGCAAGTAAAGGACTTGAAGCTGTCCAAACT
GAAATTGATGATCTTGATTGGGAGAGCACTTTCTTCTTGAAGCATCTCCCTGTTTCCAAT
GTGTATGAAGTTCCTGACCTGGATGATGAATACAGGAAAGTTATGAAAGATTTTGCACTG
AAGCTAGAGAAACTAGCTGAAAATCTTTTGGATTTGCTGTGTGAGAATCTTGGACTAGAG
AAAGGTTATTTGAAAAAAGCATTTTATGGCTCAAAGGGTTCAACTTTTGGCACCAAAGTT
AGCAACTATCCTCCTTGTCCCAAGCCGGACTTGATCAAAGGCCTTCGCGCTCACACTGAT
GCTGGTGGCATCATCCTGCTTTTCCAAGATGACAAAGTCAGTGGTCTCCAATTGCTAAAA
GATGGCAGTTGGATTGATGTACCTCCTATGAAACACTCTATTGTCATCAACCTCGGCGAT
CAGCTTGAGGTGATTACTAATGGAACATACAAGAGTATTGAACACAGAGTGATTGCTCAA
CAAGATGGCACTAGGATGTCAATAGCTTCCTTTTATAATCCAGGAAGTGATGCTGTCATA
TTTCCAGCACCAGAGTTGATTGAGAAGACAGAAGAAGAGAACAAATTGAAGTATCCAAAA
TTTGTGTTTGAAGATTATATGAAGTTGTATGCAGGTCTCAAATTTCAGGCTAAGGAGCCT
AGGTTTGAAGCAATGAAGGCTGTGGAGACTACTGTCAACTTAGGTCCAATAGAAACTGTT
TGA