Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043081
CDS Infomation

pacid=37427848 polypeptide=PGSC0003DMP400029223 locus=PGSC0003DMG400016710 ID=PGSC0003DMT400043081.v4.03 annot-version=v4.03
Sequence

ATGACTTCTCGCAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTACGACTACGATGAT
AAGGAACAATCCACCGTTCCGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCACAGG
AACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAG
AAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTCTTTGTGATCGCTTTTGTC
GGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGCTTCTCGGGTGGAG
TTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGGGAAGAACTGCTAAGGCTT
GGGCTTGGCAAAGGGAGAAAGCCTCAGAAAACAATCTATGCACGATTGCTGGCTAAAGCT
GCTCATTCCTTAGCTGAGGGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCC
TATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTGAG
GGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCT
GTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAGATTT
CTGTACAGTAGTGTTTGGAAAGATGTGAGCCAGTTTGGCGATATCTACCAGGAGGAGCAT
TTCATTGACTACCTGAAACCTGATATTCGTGTAGTTAGAGAACTTCCTCAAGAGTTGCAG
TCATTAGATCTAGAGGCCATTGGCAGTTTGGTGACAGATGCAGATGTTGTAAAAGAAGCA
AAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACAGAGTTGTCCAT
TTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029223
PEP Infomation

pacid=37427848 transcript=PGSC0003DMT400043081 locus=PGSC0003DMG400016710 ID=PGSC0003DMT400043081.v4.03 annot-version=v4.03
Sequence

MTSRSNSFSNFSESSYDYDDKEQSTVPTSDRDEPLNPGHRNNSFNGLLGFTFGSKKMRKK
KPFCQEKAIVGLALFVIAFVGMNWWMLSRIQNSGRASRVEFRFLEDNSSTLSIREELLRL
GLGKGRKPQKTIYARLLAKAAHSLAEGQKKSEPKDLWAEPYFVASSWKPCAEQRQWLPSE
GKNGYIIVTANGGINQQRVAVCNIVAIARLLDATLVLPRFLYSSVWKDVSQFGDIYQEEH
FIDYLKPDIRVVRELPQELQSLDLEAIGSLVTDADVVKEAKPGFYKKYILPILHKNRVVH
FLGFGNRLASDPLPPQVQM*

Transcript Sequence

Transcript ID

PGSC0003DMT400043081
Transcript Infomation

pacid=37427848 locus=PGSC0003DMG400016710 ID=PGSC0003DMT400043081.v4.03 annot-version=v4.03
Sequence

ATGACTTCTCGCAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTACGACTACGATGAT
AAGGAACAATCCACCGTTCCGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCACAGG
AACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAG
AAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTCTTTGTGATCGCTTTTGTC
GGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGCTTCTCGGGTGGAG
TTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGGGAAGAACTGCTAAGGCTT
GGGCTTGGCAAAGGGAGAAAGCCTCAGAAAACAATCTATGCACGATTGCTGGCTAAAGCT
GCTCATTCCTTAGCTGAGGGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCC
TATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTGAG
GGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCT
GTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAGATTT
CTGTACAGTAGTGTTTGGAAAGATGTGAGCCAGTTTGGCGATATCTACCAGGAGGAGCAT
TTCATTGACTACCTGAAACCTGATATTCGTGTAGTTAGAGAACTTCCTCAAGAGTTGCAG
TCATTAGATCTAGAGGCCATTGGCAGTTTGGTGACAGATGCAGATGTTGTAAAAGAAGCA
AAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACAGAGTTGTCCAT
TTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGATGTAA