Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043076
CDS Infomation

pacid=37427283 polypeptide=PGSC0003DMP400029218 locus=PGSC0003DMG400016709 ID=PGSC0003DMT400043076.v4.03 annot-version=v4.03
Sequence

ATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCACCCTTTTGCCAGTAGTGGTGATT
GTGGTAGTGGTTTTTTACTCATCTTTTGTTGTGGAAGGAAACACTGATCCGAATGATTTG
CAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAGTCCTTCACAGCTCTCTAATTGGAAG
TCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCT
ATTGTTTCAATTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAAT
GGTCTTACCTCGTTAAAGAACTTGGATATGAGCGGCAACAACATTCATGATTCTATTCCA
TATCAGCTTCCACCCAATCTCACTAGCCTGAATCTTGCAAACAACAATATAAGTGGCAAC
ATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGAATCTTAGCCATAACTCA
CTCTCTCAAACAATTGGAGAATTGTTCACCAATCACTCCGATCTGGGAGCTTTGGATCTG
TCCTCGAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCC
ATACTTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGGTTGGTCTACCG
TTGACTAATTTAAATGTTGCAAAGAATCATTTCAATGGATGGATCCCGAATGAGCTTCTA
TCTATCCCTAACTTCATATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCA
CCACCATACACTGCACCTCCTCCTGGAAGATCTCGCAACAATCGTAGCCATTCTCCTCCT
AGTTCACGTACAAGACCAGGTTCTGATGGCCAGCCATCTCCAGAAAATGGTGATAAAAAA
AAGGGATTGACAACTGGAGCTATCATTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTT
TTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACA
AGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGTGAATATGGAGGTACAAGAG
CAAAGGGCGAATCCTGTGGCTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTG
ACTGTTGAAATGATACAAGGGAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACT
GCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAAT
CTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGATA
ATGGTCATCAAAAAGATCGACAGTGCTGCACTGTCGCTGCAGGAGGAAGATAACTTTCTT
GAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATAT
TGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCAT
GATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAACGCCCGGGTTAGA
GTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGCTATAGCTGTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400029218
PEP Infomation

pacid=37427283 transcript=PGSC0003DMT400043076 locus=PGSC0003DMG400016709 ID=PGSC0003DMT400043076.v4.03 annot-version=v4.03
Sequence

MNRNSCKQDTLFTLLPVVVIVVVVFYSSFVVEGNTDPNDLQALQVLYASLNSPSQLSNWK
SNGGDPCGESWKGITCQASSIVSIQIPDLGLNGTLGYMLNGLTSLKNLDMSGNNIHDSIP
YQLPPNLTSLNLANNNISGNIPYSFAGMVTLSYLNLSHNSLSQTIGELFTNHSDLGALDL
SSNNFSGDLPSSFSSLTNLSILHLENNQLSGPLNILVGLPLTNLNVAKNHFNGWIPNELL
SIPNFIYDGNSFANGPAPPPPPYTAPPPGRSRNNRSHSPPSSRTRPGSDGQPSPENGDKK
KGLTTGAIIGIALGSSLAILFALVALVFCFRRGKGKEIATRPSTGSLPVGTDKVNMEVQE
QRANPVAAVADLKPPPTEKVTVEMIQGKNGSVRRVKSPITASAYTVAALQTATNSFSQEN
LIGEGSLGRVYRAEFPNGKIMVIKKIDSAALSLQEEDNFLEAVSNMSRLRHPNIVQLIGY
CAEHGQRLLVYDHVANGSLHDMLHFADERSELLTWNARVRVALGTARALEYAIAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400043076
Transcript Infomation

pacid=37427283 locus=PGSC0003DMG400016709 ID=PGSC0003DMT400043076.v4.03 annot-version=v4.03
Sequence

ATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCACCCTTTTGCCAGTAGTGGTGATT
GTGGTAGTGGTTTTTTACTCATCTTTTGTTGTGGAAGGAAACACTGATCCGAATGATTTG
CAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAGTCCTTCACAGCTCTCTAATTGGAAG
TCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCT
ATTGTTTCAATTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAAT
GGTCTTACCTCGTTAAAGAACTTGGATATGAGCGGCAACAACATTCATGATTCTATTCCA
TATCAGCTTCCACCCAATCTCACTAGCCTGAATCTTGCAAACAACAATATAAGTGGCAAC
ATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGAATCTTAGCCATAACTCA
CTCTCTCAAACAATTGGAGAATTGTTCACCAATCACTCCGATCTGGGAGCTTTGGATCTG
TCCTCGAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCC
ATACTTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGGTTGGTCTACCG
TTGACTAATTTAAATGTTGCAAAGAATCATTTCAATGGATGGATCCCGAATGAGCTTCTA
TCTATCCCTAACTTCATATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCA
CCACCATACACTGCACCTCCTCCTGGAAGATCTCGCAACAATCGTAGCCATTCTCCTCCT
AGTTCACGTACAAGACCAGGTTCTGATGGCCAGCCATCTCCAGAAAATGGTGATAAAAAA
AAGGGATTGACAACTGGAGCTATCATTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTT
TTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACA
AGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGTGAATATGGAGGTACAAGAG
CAAAGGGCGAATCCTGTGGCTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTG
ACTGTTGAAATGATACAAGGGAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACT
GCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAAT
CTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGATA
ATGGTCATCAAAAAGATCGACAGTGCTGCACTGTCGCTGCAGGAGGAAGATAACTTTCTT
GAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATAT
TGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCAT
GATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAACGCCCGGGTTAGA
GTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGCTATAGCTGTATAG