Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043038
CDS Infomation

pacid=37459937 polypeptide=PGSC0003DMP400029190 locus=PGSC0003DMG400016690 ID=PGSC0003DMT400043038.v4.03 annot-version=v4.03
Sequence

ATGGTCGAGGTTGAGGCTTCTCCACCTGATCTCAACGACAAAGCCTCATCTCCTCACCAC
ACAATGATAATGGTGCCTACTGAAGGAGAATTTGCAATGGGAAAGAGGAAGGATCAAGGT
ATTAGTGAACCTGAAGGGAGTAGAAAAAAGAAGAAAAAGCAAGTAGCCACTCCTCGTCCT
GCTTGCTCTTGGGTGCACTTCAGCCGTGACTTTATTAAAGAGTATAGTGCTACACATCCT
GAATCTTCAGGCCTAAAAGCTGCCACAAAGGCAGCATCAGATGCATGGAAGCTGATGGGT
CCTGAGGAGAAGGCAAAGTACACTACTCGTGCCCGTGAAGTGTGGGATAAGTACCTGAGC
TCAGCACCTGCCCGTGCTCCTAAGCCAAGAAGACAGACCAAATTAGTCACAAGGTGTTCC
CCTGGCCGTCTACTAAATGTCTTACAACGGCTCACACCTGACCAGAAGGAAGCTGTAAAG
AGTATGGGTTTTGGTAACATCCTTGGCCTCAGATGTCGGACTCTTCGAAGAAGTTTGTGT
CTTTGGCTATTGGAGAGGTTCAATACTGTAAGACGTAGCTTGGAAATCTGTGGTGAGAGG
ATACCCTTAACTCCAAGGGATGTGGAACTTGTAATGGGTTTGCCTGCCAGTGGTAAAGAT
GTGGTGAACTCAGGGTCTGATGAATTGATTTTACAATTACGTAAACGATACAATGCCACC
AATCGTGGGATTTCTGTCCGTCTTCTGGAGGAACGACTTGCAGCTCCAGAAGCTGGGGAA
GATTTCAAAAGGTCATTCGTGCTTTATGTAATGGGCACTCTTTTGTGCCCAACTGCAAGG
CTTGACGTAAGCCCTTCTTTCCTCCATTTTTTGACAAATATGGATGTACTCCATCAATAT
AATTGGGGCAAGTTCTTGCTTGACCGGCTAGTGCGGGAGATATCTCGTTTTCGTCAAGGA
AAGCAACGTGCAGTTGGGGGATGTCTTTTGTTTCTCCAGGTAGTCTGCATGGACAGAGGA
CTTGGGATGGGGTCATTGGGATACAAAGCCCAAACTGACAGTATGCCGCTGAGAGCAGTG
GAACCAATGCAAGAGGTTTCTCATGCACAGGACATGGAAGATCAAGAGTATGAAGATACC
TTCACAGAACAGGAACATGCACACACAGATAGCATAGAGGGGAATGTAGTCTGTGCAGAG
ATTGAAGTAGTTGCTGGTTCAGGACCAGTACCTTGCGGAAACATCAAGTATGGATGCACA
GAAATTGTTGATTACTCAAAGAAAAGAGATCACGAAGAGGCCTGCCCTTATGCACCATGT
CCATGCCCTCTCCAGAACTGTAAATTTGTTGATTCCTCCAAGCAACTCTCATCGCATTTC
AGCAGTAAGCACTGGGATTCAGGAAGGCACTTTCAGTATGATTGCCCATTGCCTATCTCG
TTGAGCAAGAAGGAAACTTTCCTTGTTTTACAAGCAGAAAAAGATGGGATCCTCTTTCTT
CTATCCAAGGGAACACAAAGTATAGGGCATACCATTGTGATTACTTGTATCGGTCCAAGG
TCATCAAAGGAATGCTATTTGTATGATGTTGTATCAGAAAAAGGAAGCAGCTCACTGAGA
TTGAAATCATCTGCTCATAGTTTTCCAGGTAGATTTCAAGGTTTACCCCCGGTGGATTTT
CTCCTGGTTCCCTTTGCTCATCTGGACTCATCCGGGCAGCTAGATTTAGAGATTTGTATA
TGGAGCCCGACAGAGCCTGGATCAGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029190
PEP Infomation

pacid=37459937 transcript=PGSC0003DMT400043038 locus=PGSC0003DMG400016690 ID=PGSC0003DMT400043038.v4.03 annot-version=v4.03
Sequence

MVEVEASPPDLNDKASSPHHTMIMVPTEGEFAMGKRKDQGISEPEGSRKKKKKQVATPRP
ACSWVHFSRDFIKEYSATHPESSGLKAATKAASDAWKLMGPEEKAKYTTRAREVWDKYLS
SAPARAPKPRRQTKLVTRCSPGRLLNVLQRLTPDQKEAVKSMGFGNILGLRCRTLRRSLC
LWLLERFNTVRRSLEICGERIPLTPRDVELVMGLPASGKDVVNSGSDELILQLRKRYNAT
NRGISVRLLEERLAAPEAGEDFKRSFVLYVMGTLLCPTARLDVSPSFLHFLTNMDVLHQY
NWGKFLLDRLVREISRFRQGKQRAVGGCLLFLQVVCMDRGLGMGSLGYKAQTDSMPLRAV
EPMQEVSHAQDMEDQEYEDTFTEQEHAHTDSIEGNVVCAEIEVVAGSGPVPCGNIKYGCT
EIVDYSKKRDHEEACPYAPCPCPLQNCKFVDSSKQLSSHFSSKHWDSGRHFQYDCPLPIS
LSKKETFLVLQAEKDGILFLLSKGTQSIGHTIVITCIGPRSSKECYLYDVVSEKGSSSLR
LKSSAHSFPGRFQGLPPVDFLLVPFAHLDSSGQLDLEICIWSPTEPGSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400043038
Transcript Infomation

pacid=37459937 locus=PGSC0003DMG400016690 ID=PGSC0003DMT400043038.v4.03 annot-version=v4.03
Sequence

ATGGTCGAGGTTGAGGCTTCTCCACCTGATCTCAACGACAAAGCCTCATCTCCTCACCAC
ACAATGATAATGGTGCCTACTGAAGGAGAATTTGCAATGGGAAAGAGGAAGGATCAAGGT
ATTAGTGAACCTGAAGGGAGTAGAAAAAAGAAGAAAAAGCAAGTAGCCACTCCTCGTCCT
GCTTGCTCTTGGGTGCACTTCAGCCGTGACTTTATTAAAGAGTATAGTGCTACACATCCT
GAATCTTCAGGCCTAAAAGCTGCCACAAAGGCAGCATCAGATGCATGGAAGCTGATGGGT
CCTGAGGAGAAGGCAAAGTACACTACTCGTGCCCGTGAAGTGTGGGATAAGTACCTGAGC
TCAGCACCTGCCCGTGCTCCTAAGCCAAGAAGACAGACCAAATTAGTCACAAGGTGTTCC
CCTGGCCGTCTACTAAATGTCTTACAACGGCTCACACCTGACCAGAAGGAAGCTGTAAAG
AGTATGGGTTTTGGTAACATCCTTGGCCTCAGATGTCGGACTCTTCGAAGAAGTTTGTGT
CTTTGGCTATTGGAGAGGTTCAATACTGTAAGACGTAGCTTGGAAATCTGTGGTGAGAGG
ATACCCTTAACTCCAAGGGATGTGGAACTTGTAATGGGTTTGCCTGCCAGTGGTAAAGAT
GTGGTGAACTCAGGGTCTGATGAATTGATTTTACAATTACGTAAACGATACAATGCCACC
AATCGTGGGATTTCTGTCCGTCTTCTGGAGGAACGACTTGCAGCTCCAGAAGCTGGGGAA
GATTTCAAAAGGTCATTCGTGCTTTATGTAATGGGCACTCTTTTGTGCCCAACTGCAAGG
CTTGACGTAAGCCCTTCTTTCCTCCATTTTTTGACAAATATGGATGTACTCCATCAATAT
AATTGGGGCAAGTTCTTGCTTGACCGGCTAGTGCGGGAGATATCTCGTTTTCGTCAAGGA
AAGCAACGTGCAGTTGGGGGATGTCTTTTGTTTCTCCAGGTAGTCTGCATGGACAGAGGA
CTTGGGATGGGGTCATTGGGATACAAAGCCCAAACTGACAGTATGCCGCTGAGAGCAGTG
GAACCAATGCAAGAGGTTTCTCATGCACAGGACATGGAAGATCAAGAGTATGAAGATACC
TTCACAGAACAGGAACATGCACACACAGATAGCATAGAGGGGAATGTAGTCTGTGCAGAG
ATTGAAGTAGTTGCTGGTTCAGGACCAGTACCTTGCGGAAACATCAAGTATGGATGCACA
GAAATTGTTGATTACTCAAAGAAAAGAGATCACGAAGAGGCCTGCCCTTATGCACCATGT
CCATGCCCTCTCCAGAACTGTAAATTTGTTGATTCCTCCAAGCAACTCTCATCGCATTTC
AGCAGTAAGCACTGGGATTCAGGAAGGCACTTTCAGTATGATTGCCCATTGCCTATCTCG
TTGAGCAAGAAGGAAACTTTCCTTGTTTTACAAGCAGAAAAAGATGGGATCCTCTTTCTT
CTATCCAAGGGAACACAAAGTATAGGGCATACCATTGTGATTACTTGTATCGGTCCAAGG
TCATCAAAGGAATGCTATTTGTATGATGTTGTATCAGAAAAAGGAAGCAGCTCACTGAGA
TTGAAATCATCTGCTCATAGTTTTCCAGGTAGATTTCAAGGTTTACCCCCGGTGGATTTT
CTCCTGGTTCCCTTTGCTCATCTGGACTCATCCGGGCAGCTAGATTTAGAGATTTGTATA
TGGAGCCCGACAGAGCCTGGATCAGAGTGA