Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043007
CDS Infomation

pacid=37462900 polypeptide=PGSC0003DMP400029164 locus=PGSC0003DMG400016679 ID=PGSC0003DMT400043007.v4.03 annot-version=v4.03
Sequence

ATGTCTTGCGCCATTGTTGAAAAAACCCTTTATCTCATTCAATCAGATGACCCAATTTTG
AAATTGCAGGGTGCTAGGGATATTCGCCGGCTAACTAAAAGTTCTTTGCGTTACCGGCGT
CATTTTTCTGACGCCGTTAAACCCCTTGTTGATATGCTTCGTAATTCGCCGTCAGTTGAA
TATAATGAAGCTGCTCTTCTTGCGTTACTCAATCTCTCCGTTAAAGATGAAGGAAACAAG
AAAAGTATCATAGATGCTGGTGCCTTAGAACCCATCATTGGCTTTCTTCAATCAGAGAAT
GCAAGTCTACAAGAGCATGCAACTGCTTCATTACTCACATTATCAGCATCTTCTGTCACG
AAACCGATCCTTAGTTCTTTTGGTGTCATCCCTCTACTCGTGGATATTCTAAGACGCAGT
AGTCCACAAGCCAAGGTTGATTCTATAATCACTTTATACAATCTTTCAACTTCTCAAGGC
AATCTCACATTGATCCTTCAAACAGAGCCAATTCCTTCTATAGTTACTCTGCTTAAATCT
TGTAAAAAGTCCTCAAAAACCGCTGAAAAATGTACTGCTCTCCTAGAATTTTTAATGTCC
TATGACGAGTGTAGGAATGCGTTGACATCTGAAGAAGGGGGGATACTTGCAATAGTGGAA
GTCCTTGAAATCGGATCTTTACAAAGCCGAGAACATGCATTAGGAGCTCTGTTGACAATG
TGTCAAAGTGATAGATGTAAATACCGGGAACTAATTCTCAGAGAAGGTGTAGTTCCTGGA
CTTCTTGAGCTGACTGTTAAAGGGACAACTAAGTCTAAAGAGAAATCACAAACACTTCTA
AGGTTGCTGAGAAATACTCCTTACGAAAGGTCTCAGCTTCAACCCGACACATTGGAGAAC
ATTGTTTTTAATCTTATATCTCAGATAGATGGCAAGGAGCAAACTGGAAAAGCGCGGGGA
TTGCTTGCTGAAGTGATACAAGTTAGCATGGATCAAAGTTTGAGACGTTTACACCAAAGG
GCAACGGTGTGTACTCCAGTTGATTTGTCTGTTTCCGGTGCTGGCTCTACGATCTCTTCA
ACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400029164
PEP Infomation

pacid=37462900 transcript=PGSC0003DMT400043007 locus=PGSC0003DMG400016679 ID=PGSC0003DMT400043007.v4.03 annot-version=v4.03
Sequence

MSCAIVEKTLYLIQSDDPILKLQGARDIRRLTKSSLRYRRHFSDAVKPLVDMLRNSPSVE
YNEAALLALLNLSVKDEGNKKSIIDAGALEPIIGFLQSENASLQEHATASLLTLSASSVT
KPILSSFGVIPLLVDILRRSSPQAKVDSIITLYNLSTSQGNLTLILQTEPIPSIVTLLKS
CKKSSKTAEKCTALLEFLMSYDECRNALTSEEGGILAIVEVLEIGSLQSREHALGALLTM
CQSDRCKYRELILREGVVPGLLELTVKGTTKSKEKSQTLLRLLRNTPYERSQLQPDTLEN
IVFNLISQIDGKEQTGKARGLLAEVIQVSMDQSLRRLHQRATVCTPVDLSVSGAGSTISS
T*

Transcript Sequence

Transcript ID

PGSC0003DMT400043007
Transcript Infomation

pacid=37462900 locus=PGSC0003DMG400016679 ID=PGSC0003DMT400043007.v4.03 annot-version=v4.03
Sequence

ATGTCTTGCGCCATTGTTGAAAAAACCCTTTATCTCATTCAATCAGATGACCCAATTTTG
AAATTGCAGGGTGCTAGGGATATTCGCCGGCTAACTAAAAGTTCTTTGCGTTACCGGCGT
CATTTTTCTGACGCCGTTAAACCCCTTGTTGATATGCTTCGTAATTCGCCGTCAGTTGAA
TATAATGAAGCTGCTCTTCTTGCGTTACTCAATCTCTCCGTTAAAGATGAAGGAAACAAG
AAAAGTATCATAGATGCTGGTGCCTTAGAACCCATCATTGGCTTTCTTCAATCAGAGAAT
GCAAGTCTACAAGAGCATGCAACTGCTTCATTACTCACATTATCAGCATCTTCTGTCACG
AAACCGATCCTTAGTTCTTTTGGTGTCATCCCTCTACTCGTGGATATTCTAAGACGCAGT
AGTCCACAAGCCAAGGTTGATTCTATAATCACTTTATACAATCTTTCAACTTCTCAAGGC
AATCTCACATTGATCCTTCAAACAGAGCCAATTCCTTCTATAGTTACTCTGCTTAAATCT
TGTAAAAAGTCCTCAAAAACCGCTGAAAAATGTACTGCTCTCCTAGAATTTTTAATGTCC
TATGACGAGTGTAGGAATGCGTTGACATCTGAAGAAGGGGGGATACTTGCAATAGTGGAA
GTCCTTGAAATCGGATCTTTACAAAGCCGAGAACATGCATTAGGAGCTCTGTTGACAATG
TGTCAAAGTGATAGATGTAAATACCGGGAACTAATTCTCAGAGAAGGTGTAGTTCCTGGA
CTTCTTGAGCTGACTGTTAAAGGGACAACTAAGTCTAAAGAGAAATCACAAACACTTCTA
AGGTTGCTGAGAAATACTCCTTACGAAAGGTCTCAGCTTCAACCCGACACATTGGAGAAC
ATTGTTTTTAATCTTATATCTCAGATAGATGGCAAGGAGCAAACTGGAAAAGCGCGGGGA
TTGCTTGCTGAAGTGATACAAGTTAGCATGGATCAAAGTTTGAGACGTTTACACCAAAGG
GCAACGGTGTGTACTCCAGTTGATTTGTCTGTTTCCGGTGCTGGCTCTACGATCTCTTCA
ACATGA