Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042958
CDS Infomation

pacid=37454452 polypeptide=PGSC0003DMP400029134 locus=PGSC0003DMG400016655 ID=PGSC0003DMT400042958.v4.03 annot-version=v4.03
Sequence

ATGGAGAAACCTGTGGTAATACTCATTTTTACAACTGTAATTATGAATCTTGAATGCCTA
GTACAATCAGATGCCTCTACACATCGGTATAAAAGTGGAGATGATGTTCCTTTCTATGCA
AACAAGGTTGGCCCATATTTTAATCCCAGTGAAACTTATGCTTATTTCGATCTTCCATTT
TGTCAACCAGATAATTTGGAAAAGAAGAAAGAATCTTTTGGTGAAGCGTTGAATGGAGAT
CACCTTACATTTGCTCCATATAAGCTTGAGTTTTTAGCGGACAAAGATGCCAAAGTTATA
TGTAAGAAAAGGTTGACAAAGGAGGAAGTTGCACAATTCAGAACCGCTGTTGCACTGGAT
TACTATGTCCAGATGTACTATGATGACTTGCCAATATGGGCGTTCCTTGGGAAGGTCGAC
AAGGACGGAATTGATGACCCTAATGAGTACAGATATCACATTTATACATTTTATCAATTT
GAAATTTACTACCACAAGGACCATGTTATTGAAATCTTAGTTAGAGTCGATCCATCTTTT
ACAGCTGATGTAACAAATGATGAGGAAGTTGATATAGAATTCCTGTACACAGTGGTGTGG
AAGGAAACTAACATCCCATTTGAAAAGAGAATGGACAAATACACGAGCTCTTCTTCTCTT
CCCCATCACTTAGAAATTCACTGGTTCTCCATTTTAAACTCACATGTGACAATTTTCATC
TTGATGTCATGTATGGGAGCAATTTACTTGCGAGTCCTGAGGAAAGATATTTATAATCTT
GCACAGGATGAAGAATTTTCTGATAACCAAGAAGAAACTGGGTGGAAAAGCCTCCACGGC
GATGTCTTCCGGTACCCAAAGTGCAAGTATTTGCTTTCTTCAGCACTTGGTTGTGGAACA
CAGATGTTGGCAGTTGTGGTGGTCACTCTATGTTTAGGTGTGCTTGGTGTTTTTCAACCG
TATGATCGAGGAGTTTTGCCCACTGCTTTGGTCATAATATATGCAATAACTTCTGCAGTT
GCTGGATTTTCGGCTGTATCTTTTTATCATCAGCTCGAAGGAAGCAACTCGCTAAGAGTT
ATATTGCTGACGGGAGGAATATTCTCTTGCCCCTTGTTGCTAACCTTTTTCTTCCTTAAT
ACTGTTGCATTCAACTATGGGTCTACTGCAGCACTTCCTTTGGGCACAATTGTGGTTATA
CTTCTCCTCTGGGTTTTGCTAGCATTACCGTCACTTGTGTTAGGTGCGATTTCTGGGAAG
AGAATAAGGTCTGAGTTTCAAGCTCCTTGTCACACCACGAAGTGTCCTCGTGAGGTTCCT
CCACAGCGTTGGTACAGGCGTGTCATAACCCAAATGGCAATGGCAGGACTTTTGCCTTTT
GCTGTCATCAATATTCAGCTATATTACATATTTGCAAGTGTTTGGGGTCACAGGATATAC
ACAGTATATGGCATTCTTTTCGTTGTGTTCATTCTCCTTCTGATTACAACTGCTCTTGTC
TCTATTGCTATGACATACATCCAACTTGCCGCAGAAGATCATGAATGGTGGTGGAGGTCT
TTTCTTTGTGGTGGATCCACTGGCTTGTACGTATTTGGTTATTCCATCTACTACTACTTT
TTGCGGTCAGACATGAATGGTTTCATGCAAACCTCATTCTTCTTTGGATATATGGCTTGT
GTTAGTTATGGTGTCTTCCTCATGCTAGGCACTGTCGGCTTTCATGCCTGTTTGCTATTT
GTCCGTCTTCTGTATGGCTGTATCAAATGTGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400029134
PEP Infomation

pacid=37454452 transcript=PGSC0003DMT400042958 locus=PGSC0003DMG400016655 ID=PGSC0003DMT400042958.v4.03 annot-version=v4.03
Sequence

MEKPVVILIFTTVIMNLECLVQSDASTHRYKSGDDVPFYANKVGPYFNPSETYAYFDLPF
CQPDNLEKKKESFGEALNGDHLTFAPYKLEFLADKDAKVICKKRLTKEEVAQFRTAVALD
YYVQMYYDDLPIWAFLGKVDKDGIDDPNEYRYHIYTFYQFEIYYHKDHVIEILVRVDPSF
TADVTNDEEVDIEFLYTVVWKETNIPFEKRMDKYTSSSSLPHHLEIHWFSILNSHVTIFI
LMSCMGAIYLRVLRKDIYNLAQDEEFSDNQEETGWKSLHGDVFRYPKCKYLLSSALGCGT
QMLAVVVVTLCLGVLGVFQPYDRGVLPTALVIIYAITSAVAGFSAVSFYHQLEGSNSLRV
ILLTGGIFSCPLLLTFFFLNTVAFNYGSTAALPLGTIVVILLLWVLLALPSLVLGAISGK
RIRSEFQAPCHTTKCPREVPPQRWYRRVITQMAMAGLLPFAVINIQLYYIFASVWGHRIY
TVYGILFVVFILLLITTALVSIAMTYIQLAAEDHEWWWRSFLCGGSTGLYVFGYSIYYYF
LRSDMNGFMQTSFFFGYMACVSYGVFLMLGTVGFHACLLFVRLLYGCIKCE*

Transcript Sequence

Transcript ID

PGSC0003DMT400042958
Transcript Infomation

pacid=37454452 locus=PGSC0003DMG400016655 ID=PGSC0003DMT400042958.v4.03 annot-version=v4.03
Sequence

ATGGAGAAACCTGTGGTAATACTCATTTTTACAACTGTAATTATGAATCTTGAATGCCTA
GTACAATCAGATGCCTCTACACATCGGTATAAAAGTGGAGATGATGTTCCTTTCTATGCA
AACAAGGTTGGCCCATATTTTAATCCCAGTGAAACTTATGCTTATTTCGATCTTCCATTT
TGTCAACCAGATAATTTGGAAAAGAAGAAAGAATCTTTTGGTGAAGCGTTGAATGGAGAT
CACCTTACATTTGCTCCATATAAGCTTGAGTTTTTAGCGGACAAAGATGCCAAAGTTATA
TGTAAGAAAAGGTTGACAAAGGAGGAAGTTGCACAATTCAGAACCGCTGTTGCACTGGAT
TACTATGTCCAGATGTACTATGATGACTTGCCAATATGGGCGTTCCTTGGGAAGGTCGAC
AAGGACGGAATTGATGACCCTAATGAGTACAGATATCACATTTATACATTTTATCAATTT
GAAATTTACTACCACAAGGACCATGTTATTGAAATCTTAGTTAGAGTCGATCCATCTTTT
ACAGCTGATGTAACAAATGATGAGGAAGTTGATATAGAATTCCTGTACACAGTGGTGTGG
AAGGAAACTAACATCCCATTTGAAAAGAGAATGGACAAATACACGAGCTCTTCTTCTCTT
CCCCATCACTTAGAAATTCACTGGTTCTCCATTTTAAACTCACATGTGACAATTTTCATC
TTGATGTCATGTATGGGAGCAATTTACTTGCGAGTCCTGAGGAAAGATATTTATAATCTT
GCACAGGATGAAGAATTTTCTGATAACCAAGAAGAAACTGGGTGGAAAAGCCTCCACGGC
GATGTCTTCCGGTACCCAAAGTGCAAGTATTTGCTTTCTTCAGCACTTGGTTGTGGAACA
CAGATGTTGGCAGTTGTGGTGGTCACTCTATGTTTAGGTGTGCTTGGTGTTTTTCAACCG
TATGATCGAGGAGTTTTGCCCACTGCTTTGGTCATAATATATGCAATAACTTCTGCAGTT
GCTGGATTTTCGGCTGTATCTTTTTATCATCAGCTCGAAGGAAGCAACTCGCTAAGAGTT
ATATTGCTGACGGGAGGAATATTCTCTTGCCCCTTGTTGCTAACCTTTTTCTTCCTTAAT
ACTGTTGCATTCAACTATGGGTCTACTGCAGCACTTCCTTTGGGCACAATTGTGGTTATA
CTTCTCCTCTGGGTTTTGCTAGCATTACCGTCACTTGTGTTAGGTGCGATTTCTGGGAAG
AGAATAAGGTCTGAGTTTCAAGCTCCTTGTCACACCACGAAGTGTCCTCGTGAGGTTCCT
CCACAGCGTTGGTACAGGCGTGTCATAACCCAAATGGCAATGGCAGGACTTTTGCCTTTT
GCTGTCATCAATATTCAGCTATATTACATATTTGCAAGTGTTTGGGGTCACAGGATATAC
ACAGTATATGGCATTCTTTTCGTTGTGTTCATTCTCCTTCTGATTACAACTGCTCTTGTC
TCTATTGCTATGACATACATCCAACTTGCCGCAGAAGATCATGAATGGTGGTGGAGGTCT
TTTCTTTGTGGTGGATCCACTGGCTTGTACGTATTTGGTTATTCCATCTACTACTACTTT
TTGCGGTCAGACATGAATGGTTTCATGCAAACCTCATTCTTCTTTGGATATATGGCTTGT
GTTAGTTATGGTGTCTTCCTCATGCTAGGCACTGTCGGCTTTCATGCCTGTTTGCTATTT
GTCCGTCTTCTGTATGGCTGTATCAAATGTGAATAG