Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042942
CDS Infomation

pacid=37453167 polypeptide=PGSC0003DMP400029121 locus=PGSC0003DMG400016649 ID=PGSC0003DMT400042942.v4.03 annot-version=v4.03
Sequence

ATGAGTGAGAACAAGCGCTTTCAGCTTGGCACCATTGGAGCTTTGTCTCTATCTGTTGTT
TCATCAGTATCTATTGTGATATGCAATAAAGCGCTTATGAGCTCTTTAGGTTTTCGTTTT
GCTACAACTTTGACGAGCTGGCATCTACTGGTCACTTTTTGCTCCCTCCATGTGGCGCTA
TGGATGAAGCTATTTGAACACAAACCTTTTGATCCAAGAACTGTAGTTGGATTTGGTATT
CTGAATGGAATTTCAATTGGGTTGCTAAACCTTAGCCTTGGTTTCAATTCTGTTGGTTTT
TATCAGATGACGAAGCTTGCAATCATACCATGCACTGTATTTTTAGAGACAATTTTCCTC
AACAAAAAATTCAGTCGGAGCATTCAACTCTCTCTTTGCGTCCTTCTTTTGGGTGTTGGA
ATTGCAACTGTAACTGATTTACAGCTGAACTTCCTGGGCTCTATCTTGTCACTCCTTGCA
GTTCTTACCACTTGTGTTGCTCAAATTATGACCAATACCATCCAAAAGAAGTTCAAGGTT
TCTTCAACACAACTGTTGTATCAATCTTGTCCTTATCAAGCCATGACTTTGTTCGTCTCC
GGTCCGTTTCTGGATAAGTTTTTGACTCAGCAAAATGTATTTGCCTTCAGATATACGCCA
CAAGTGCTGACTTTCATTGCTATGTCCTGCTTGATCTCAGTCTCTGTTAACTTTAGCACA
TTCCTTGTGATTGGAAAGACATCCCCTGTCACCTACCAAGTCCTTGGCCATCTTAAAACC
TGTCTAGTATTAGCTTTTGGATATATCTTACTTCATGACCCATTCAACTGGAGGAACATT
CTTGGGATCTTTGTTGCTATGATGGGAATGGTTCTTTATTCATATTATTGCACTCGTGAA
GGTCAGAAAAAAGCTTCAGAAGCATCAGTACAACTTCAGACCAAAGAAGATGAATCTGAT
CCTCTAATAGGCATGGAGACGGGAGCTGGTGCAACAAATGATGTAGCTCTCCCAATATCC
CCAATTGGGAAAGCTGATAACGATTTGCGTGCTCGAGACTACAACCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029121
PEP Infomation

pacid=37453167 transcript=PGSC0003DMT400042942 locus=PGSC0003DMG400016649 ID=PGSC0003DMT400042942.v4.03 annot-version=v4.03
Sequence

MSENKRFQLGTIGALSLSVVSSVSIVICNKALMSSLGFRFATTLTSWHLLVTFCSLHVAL
WMKLFEHKPFDPRTVVGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVFLETIFL
NKKFSRSIQLSLCVLLLGVGIATVTDLQLNFLGSILSLLAVLTTCVAQIMTNTIQKKFKV
SSTQLLYQSCPYQAMTLFVSGPFLDKFLTQQNVFAFRYTPQVLTFIAMSCLISVSVNFST
FLVIGKTSPVTYQVLGHLKTCLVLAFGYILLHDPFNWRNILGIFVAMMGMVLYSYYCTRE
GQKKASEASVQLQTKEDESDPLIGMETGAGATNDVALPISPIGKADNDLRARDYNR*

Transcript Sequence

Transcript ID

PGSC0003DMT400042942
Transcript Infomation

pacid=37453167 locus=PGSC0003DMG400016649 ID=PGSC0003DMT400042942.v4.03 annot-version=v4.03
Sequence

ATGAGTGAGAACAAGCGCTTTCAGCTTGGCACCATTGGAGCTTTGTCTCTATCTGTTGTT
TCATCAGTATCTATTGTGATATGCAATAAAGCGCTTATGAGCTCTTTAGGTTTTCGTTTT
GCTACAACTTTGACGAGCTGGCATCTACTGGTCACTTTTTGCTCCCTCCATGTGGCGCTA
TGGATGAAGCTATTTGAACACAAACCTTTTGATCCAAGAACTGTAGTTGGATTTGGTATT
CTGAATGGAATTTCAATTGGGTTGCTAAACCTTAGCCTTGGTTTCAATTCTGTTGGTTTT
TATCAGATGACGAAGCTTGCAATCATACCATGCACTGTATTTTTAGAGACAATTTTCCTC
AACAAAAAATTCAGTCGGAGCATTCAACTCTCTCTTTGCGTCCTTCTTTTGGGTGTTGGA
ATTGCAACTGTAACTGATTTACAGCTGAACTTCCTGGGCTCTATCTTGTCACTCCTTGCA
GTTCTTACCACTTGTGTTGCTCAAATTATGACCAATACCATCCAAAAGAAGTTCAAGGTT
TCTTCAACACAACTGTTGTATCAATCTTGTCCTTATCAAGCCATGACTTTGTTCGTCTCC
GGTCCGTTTCTGGATAAGTTTTTGACTCAGCAAAATGTATTTGCCTTCAGATATACGCCA
CAAGTGCTGACTTTCATTGCTATGTCCTGCTTGATCTCAGTCTCTGTTAACTTTAGCACA
TTCCTTGTGATTGGAAAGACATCCCCTGTCACCTACCAAGTCCTTGGCCATCTTAAAACC
TGTCTAGTATTAGCTTTTGGATATATCTTACTTCATGACCCATTCAACTGGAGGAACATT
CTTGGGATCTTTGTTGCTATGATGGGAATGGTTCTTTATTCATATTATTGCACTCGTGAA
GGTCAGAAAAAAGCTTCAGAAGCATCAGTACAACTTCAGACCAAAGAAGATGAATCTGAT
CCTCTAATAGGCATGGAGACGGGAGCTGGTGCAACAAATGATGTAGCTCTCCCAATATCC
CCAATTGGGAAAGCTGATAACGATTTGCGTGCTCGAGACTACAACCGTTGA