Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042914
CDS Infomation

pacid=37452754 polypeptide=PGSC0003DMP400029103 locus=PGSC0003DMG400016640 ID=PGSC0003DMT400042914.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGATTGTGGGGTTTCTGATCAGTCTATTGGGATAACTGGATCTGGGACTGGG
ATAATGGTCATTGCTGGGGAGAAGAGGGGCCGTGTGGGAGTTGAAGAAAGAACAGGACTT
TGTCACAAAAGAGTGAAAATGAGGGATCTTGAATCTGTTCTGCGTACAGAAGAAAAAACT
GAAATGGGCACCGGTAATCTGGTCACTGATCCTGCACTTAGATTGATTGATCTGAATGCA
AATGCTGTTGCTTCTAGCAATGCGATTGCATCACATGTTGAAGAAACCAACAAACTGGCC
TCTATGGGGAAGAAAGACAATGGTCAAGAGGGGGACCCTATGAAGTCAAAAGGGTTTGCT
TTAGATCTGAATGCAGAAGATGTTTCTAGCTCTATTAATCATGAATCTTCATATCCGTGC
AAGAACTCTGTGTACTTGACATCAAAGGATGATTTTGAGTGTGCAAGTTCGGTTGGTCCA
TTGGACGAGAATGAGTCGATGAGAATCTGGAATGAGATGAAACAAAATGGTTTTCTTTCA
CATACTCACGGAGGTGCACCCATGCCAAAGCAGCAAGGGAGGAAAAGTAAAAGTGATGGG
ATGAAGAAAAAGTTAGAGCTTGCGAAGAAAGAACGAGTTGACAGGTTTGCAAAGATTGCT
GCACCGAGTGGGTTGCTCAACGGGTTAAACCCAGGGATCATAAACCATGTCAGGAACAGT
AAGCAAGTTCATTCCATTATAGAAGCCCTAGTAAAATCTGAAAAGCGTGAAAATGCCCAT
GGTAGGAGCAAGGTTCCTTCCATCCAAACAAAGGGAGGATTGAAAGACCATAGTGAAAGA
AACAAAGACCAGGAAAATATAGATGGTCCAGGAGTGAGCAGATTCAACCCTGCTCTTGAA
GATCTGCCAGGAAGCAGGTGTACAAATGGTTACCTAACATCACTGAATAAATCAATCTCT
TTGAACTCAGTGTTTACAGGAGGAGATGGAGGTTCATGCATGGTTGACACCAGGGTTACT
GGAAAGATGGTTTATCATCCAAACCCTAATATAGGCACTGAGAATGATGCACTTGCACTG
AAATTGTCATCATCCACAACCATTGCATCAGATAATACGAGCTCATTATCTAATGAGGAA
TCAGCAAACCTAGCAAGTGTTAATTCACTTTCTATCAAAGCTGCTAACGTAGCTTCACAA
TGGTTGGAATTGCTTCATCAAGACATTAAAGGACGTCTTGCAGCACTGCGGCGTAGTAAA
AAAAGAGTCCGGGCTGTAATTCAAACAGAATTCCCTTGCTTATTTTCCAGAGAATTCTCA
TCTAATCAAGAGAACAGCTCATATGGTACACAAAGCTCTTCTGTTGGTCATTTTGACAAT
GCTACTGCTCATGCACATCGTGCTAGATGGACAGCATTGTTTGATCAGATGGATGGAGCT
CTTTCAGATGAAGAAAGGCAACTGGAAAGTTGGCTGAACCAAGTAAGGCAAATGCAGCTG
CAATGTGAACAGGGTCTTCAGAAATTTGGTGCACCGCATGGTTTGCATCAGTTGGGGCTA
TTGCAAAATGACTGCAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029103
PEP Infomation

pacid=37452754 transcript=PGSC0003DMT400042914 locus=PGSC0003DMG400016640 ID=PGSC0003DMT400042914.v4.03 annot-version=v4.03
Sequence

MEEDCGVSDQSIGITGSGTGIMVIAGEKRGRVGVEERTGLCHKRVKMRDLESVLRTEEKT
EMGTGNLVTDPALRLIDLNANAVASSNAIASHVEETNKLASMGKKDNGQEGDPMKSKGFA
LDLNAEDVSSSINHESSYPCKNSVYLTSKDDFECASSVGPLDENESMRIWNEMKQNGFLS
HTHGGAPMPKQQGRKSKSDGMKKKLELAKKERVDRFAKIAAPSGLLNGLNPGIINHVRNS
KQVHSIIEALVKSEKRENAHGRSKVPSIQTKGGLKDHSERNKDQENIDGPGVSRFNPALE
DLPGSRCTNGYLTSLNKSISLNSVFTGGDGGSCMVDTRVTGKMVYHPNPNIGTENDALAL
KLSSSTTIASDNTSSLSNEESANLASVNSLSIKAANVASQWLELLHQDIKGRLAALRRSK
KRVRAVIQTEFPCLFSREFSSNQENSSYGTQSSSVGHFDNATAHAHRARWTALFDQMDGA
LSDEERQLESWLNQVRQMQLQCEQGLQKFGAPHGLHQLGLLQNDCR*

Transcript Sequence

Transcript ID

PGSC0003DMT400042914
Transcript Infomation

pacid=37452754 locus=PGSC0003DMG400016640 ID=PGSC0003DMT400042914.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAGATTGTGGGGTTTCTGATCAGTCTATTGGGATAACTGGATCTGGGACTGGG
ATAATGGTCATTGCTGGGGAGAAGAGGGGCCGTGTGGGAGTTGAAGAAAGAACAGGACTT
TGTCACAAAAGAGTGAAAATGAGGGATCTTGAATCTGTTCTGCGTACAGAAGAAAAAACT
GAAATGGGCACCGGTAATCTGGTCACTGATCCTGCACTTAGATTGATTGATCTGAATGCA
AATGCTGTTGCTTCTAGCAATGCGATTGCATCACATGTTGAAGAAACCAACAAACTGGCC
TCTATGGGGAAGAAAGACAATGGTCAAGAGGGGGACCCTATGAAGTCAAAAGGGTTTGCT
TTAGATCTGAATGCAGAAGATGTTTCTAGCTCTATTAATCATGAATCTTCATATCCGTGC
AAGAACTCTGTGTACTTGACATCAAAGGATGATTTTGAGTGTGCAAGTTCGGTTGGTCCA
TTGGACGAGAATGAGTCGATGAGAATCTGGAATGAGATGAAACAAAATGGTTTTCTTTCA
CATACTCACGGAGGTGCACCCATGCCAAAGCAGCAAGGGAGGAAAAGTAAAAGTGATGGG
ATGAAGAAAAAGTTAGAGCTTGCGAAGAAAGAACGAGTTGACAGGTTTGCAAAGATTGCT
GCACCGAGTGGGTTGCTCAACGGGTTAAACCCAGGGATCATAAACCATGTCAGGAACAGT
AAGCAAGTTCATTCCATTATAGAAGCCCTAGTAAAATCTGAAAAGCGTGAAAATGCCCAT
GGTAGGAGCAAGGTTCCTTCCATCCAAACAAAGGGAGGATTGAAAGACCATAGTGAAAGA
AACAAAGACCAGGAAAATATAGATGGTCCAGGAGTGAGCAGATTCAACCCTGCTCTTGAA
GATCTGCCAGGAAGCAGGTGTACAAATGGTTACCTAACATCACTGAATAAATCAATCTCT
TTGAACTCAGTGTTTACAGGAGGAGATGGAGGTTCATGCATGGTTGACACCAGGGTTACT
GGAAAGATGGTTTATCATCCAAACCCTAATATAGGCACTGAGAATGATGCACTTGCACTG
AAATTGTCATCATCCACAACCATTGCATCAGATAATACGAGCTCATTATCTAATGAGGAA
TCAGCAAACCTAGCAAGTGTTAATTCACTTTCTATCAAAGCTGCTAACGTAGCTTCACAA
TGGTTGGAATTGCTTCATCAAGACATTAAAGGACGTCTTGCAGCACTGCGGCGTAGTAAA
AAAAGAGTCCGGGCTGTAATTCAAACAGAATTCCCTTGCTTATTTTCCAGAGAATTCTCA
TCTAATCAAGAGAACAGCTCATATGGTACACAAAGCTCTTCTGTTGGTCATTTTGACAAT
GCTACTGCTCATGCACATCGTGCTAGATGGACAGCATTGTTTGATCAGATGGATGGAGCT
CTTTCAGATGAAGAAAGGCAACTGGAAAGTTGGCTGAACCAAGTAAGGCAAATGCAGCTG
CAATGTGAACAGGGTCTTCAGAAATTTGGTGCACCGCATGGTTTGCATCAGTTGGGGCTA
TTGCAAAATGACTGCAGGTAA