Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042869
CDS Infomation

pacid=37456132 polypeptide=PGSC0003DMP400029080 locus=PGSC0003DMG400016625 ID=PGSC0003DMT400042869.v4.03 annot-version=v4.03
Sequence

ATGGGCATAGTTTCAGGAGGCAATGGGTTTCTTTCACAGTTTTTTACAAGTGATTCAGCT
GCTTCTACTCATCAGTTTTGTTGTTTTTCAGTGAATTCAAGCCCATTGCATATGAATTTT
TCAAGGAGTGGTTGTTTGGTGAAAAGGGGTTCTTTGTTAAGCCCTAGAGTTTCAGTTTCT
ACTACTGGTAATGCTAAGATTGATGGAGTTGATGATCAGTTATCTTTATCACCTGATGAG
ATCAAACCAGCTCGGAAGTCTGCTGATTGGAAAGCAGCAAGGACATACAGTGAGAGGGGA
CTGATATTTGAGGGCAAGGTTGAAGGCTTCAATGGTGGTGGTTTGCTGATTCGATTTTAT
TCTCTCGTGGGTTTTCTGCCCTTCCCACAGATGAGCCCTTATCACTCTTGTAAAGAACCA
CAAAAGACAATTCAAGAGATTGCGAGGGACTTGACCGGTTCTGTCCTCTCTGTGAAGGTA
ATCCAAGCTGATGAGGACAGACGACGATTGATATTCTCTGAAAAGGAAGCTAGCTGGTTG
AAGTTTTCTAATAAAATAAATGTAGGTGATACTTATCAAGCAAAGGTCGGTTCAGTTGAG
GATTATGGTGCTTTTGTTCATCTGCGTTTCCCAGATGGATCTTATCACCTCACTGGGCTT
GTCCATGTCTCAGAAGTGTCTTGGGATTTAGTTCATGATGTCAGAGACATCCTCACAGAA
GGAGACGATGTGAGGGTTAAAATCATAAATATTGACAGGGAAAAATCTAGGATTACCTTG
TCAATTAAACAATTGGAGGAAGACCCTCTGCTGGAAACTCTGGATAAAGTAATTCATAAG
GATGCATCCGTCCATACTAATTCCTTGGATTCGAATGGCAGCTCGATTATTGAGCCTCTT
CCTGGGCTTGAAACAATAATCGAGGAACTACTACAAGAAGACGGCATATACGATATAATA
ATCAGTCGACAAGGATTTGAGAAACGAGTCGTTTCACAGGACTTACAGCTTTGGTTGTCG
AATGCACCAGCTACTGGGGATCAGTTTACTCTACTTGCTCGGGCTGGAAGACAGGTGCAA
GAAATACAACTCACAACATCGCTTGATCAAGAAGGAATAAAAAGGGCTCTACAACGAGTC
CTAGAACGTGTACCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400029080
PEP Infomation

pacid=37456132 transcript=PGSC0003DMT400042869 locus=PGSC0003DMG400016625 ID=PGSC0003DMT400042869.v4.03 annot-version=v4.03
Sequence

MGIVSGGNGFLSQFFTSDSAASTHQFCCFSVNSSPLHMNFSRSGCLVKRGSLLSPRVSVS
TTGNAKIDGVDDQLSLSPDEIKPARKSADWKAARTYSERGLIFEGKVEGFNGGGLLIRFY
SLVGFLPFPQMSPYHSCKEPQKTIQEIARDLTGSVLSVKVIQADEDRRRLIFSEKEASWL
KFSNKINVGDTYQAKVGSVEDYGAFVHLRFPDGSYHLTGLVHVSEVSWDLVHDVRDILTE
GDDVRVKIINIDREKSRITLSIKQLEEDPLLETLDKVIHKDASVHTNSLDSNGSSIIEPL
PGLETIIEELLQEDGIYDIIISRQGFEKRVVSQDLQLWLSNAPATGDQFTLLARAGRQVQ
EIQLTTSLDQEGIKRALQRVLERVP*

Transcript Sequence

Transcript ID

PGSC0003DMT400042869
Transcript Infomation

pacid=37456132 locus=PGSC0003DMG400016625 ID=PGSC0003DMT400042869.v4.03 annot-version=v4.03
Sequence

ATGGGCATAGTTTCAGGAGGCAATGGGTTTCTTTCACAGTTTTTTACAAGTGATTCAGCT
GCTTCTACTCATCAGTTTTGTTGTTTTTCAGTGAATTCAAGCCCATTGCATATGAATTTT
TCAAGGAGTGGTTGTTTGGTGAAAAGGGGTTCTTTGTTAAGCCCTAGAGTTTCAGTTTCT
ACTACTGGTAATGCTAAGATTGATGGAGTTGATGATCAGTTATCTTTATCACCTGATGAG
ATCAAACCAGCTCGGAAGTCTGCTGATTGGAAAGCAGCAAGGACATACAGTGAGAGGGGA
CTGATATTTGAGGGCAAGGTTGAAGGCTTCAATGGTGGTGGTTTGCTGATTCGATTTTAT
TCTCTCGTGGGTTTTCTGCCCTTCCCACAGATGAGCCCTTATCACTCTTGTAAAGAACCA
CAAAAGACAATTCAAGAGATTGCGAGGGACTTGACCGGTTCTGTCCTCTCTGTGAAGGTA
ATCCAAGCTGATGAGGACAGACGACGATTGATATTCTCTGAAAAGGAAGCTAGCTGGTTG
AAGTTTTCTAATAAAATAAATGTAGGTGATACTTATCAAGCAAAGGTCGGTTCAGTTGAG
GATTATGGTGCTTTTGTTCATCTGCGTTTCCCAGATGGATCTTATCACCTCACTGGGCTT
GTCCATGTCTCAGAAGTGTCTTGGGATTTAGTTCATGATGTCAGAGACATCCTCACAGAA
GGAGACGATGTGAGGGTTAAAATCATAAATATTGACAGGGAAAAATCTAGGATTACCTTG
TCAATTAAACAATTGGAGGAAGACCCTCTGCTGGAAACTCTGGATAAAGTAATTCATAAG
GATGCATCCGTCCATACTAATTCCTTGGATTCGAATGGCAGCTCGATTATTGAGCCTCTT
CCTGGGCTTGAAACAATAATCGAGGAACTACTACAAGAAGACGGCATATACGATATAATA
ATCAGTCGACAAGGATTTGAGAAACGAGTCGTTTCACAGGACTTACAGCTTTGGTTGTCG
AATGCACCAGCTACTGGGGATCAGTTTACTCTACTTGCTCGGGCTGGAAGACAGGTGCAA
GAAATACAACTCACAACATCGCTTGATCAAGAAGGAATAAAAAGGGCTCTACAACGAGTC
CTAGAACGTGTACCATGA