Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042840
CDS Infomation

pacid=37458518 polypeptide=PGSC0003DMP400029056 locus=PGSC0003DMG400016620 ID=PGSC0003DMT400042840.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAGAAGGAATTAAAAAAGTGCCAAGAATGAAGATGGGCTCACAAGGCCTTGAA
GTATCAGCTCAAGGGCTGGGCTGTATGGGTATGTCTGCATTTTATGGGCCCCCAAAACCT
GATGATGAAATGATCAAACTTATTCACCATTCCATTAATTCTGGTATCACTTTTCTTGAT
ACTTCAGATATATATGGGCCTTACACAAATGAAATTCTCATAGGGAAGGCTTTGAAGGGA
GAGACGAGAGAACGAGTTGAGTTGGCAACAAAGTTTGGAATTAATGCTTCTGCAGATGGA
AAAATAGAAATAATTGGAGATCCCTGCTATGTTAGAGCTTCATGTGAAGCCAGCTTAAAG
CGACTTGATGTTAACTGCATCGATTTATACTATCAACATCGGATCGATACACGTGTGCCA
ATTGAAATCACAATGGGAGAACTTAAGAAGCTAGTCGAAGAGGGTAAAATAAGATACATA
GGTCTCTCTGAGGCTTCAGGCTCGACGATCAGGAGAGCACACGAAGTTCATCCAATAACA
GCAGTACAGTTAGAATGGTCCCTATGGTCGAGAGATGTAGAGGAAGAAATAATTCCTATT
TGCAGGGAGCTTGGAATTGGAATTGTAGCATATAGTCCCTTAGGTAAAGGGTTTTTGTCA
TCAGGTCCAAAGCTGCTCGAGGATCTGTCAAATGAAGACTTTCGGAAGCATATACCAAGG
TTTCAAGCTGAGAATCTCGAGCATAACAAGATCTTATACAAGAGAATTTGTCAAATGGCA
ACGAAGAAGGGATGTACGCCATCTCAACTAGCCTTAGCCTGGGTACATCACCAAGGAAAT
GACGTGTTCCCCATCCCAGGTACTACTAAGATCAAAAACCTCGAACAGAACATCGAAGCT
CTGTACATTAAGTTAACAAATGAAGACATGGTGGAGCTTGAATCCATTGCTTCAGCTGAT
GCAGTGAAAGGTGAAAGAGATGCTTCTAGTGCAAGTACTTATAAAAACTCTGATACTCCA
CTTTTGTCAACTTGGAATGCTGCGCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400029056
PEP Infomation

pacid=37458518 transcript=PGSC0003DMT400042840 locus=PGSC0003DMG400016620 ID=PGSC0003DMT400042840.v4.03 annot-version=v4.03
Sequence

MAAEGIKKVPRMKMGSQGLEVSAQGLGCMGMSAFYGPPKPDDEMIKLIHHSINSGITFLD
TSDIYGPYTNEILIGKALKGETRERVELATKFGINASADGKIEIIGDPCYVRASCEASLK
RLDVNCIDLYYQHRIDTRVPIEITMGELKKLVEEGKIRYIGLSEASGSTIRRAHEVHPIT
AVQLEWSLWSRDVEEEIIPICRELGIGIVAYSPLGKGFLSSGPKLLEDLSNEDFRKHIPR
FQAENLEHNKILYKRICQMATKKGCTPSQLALAWVHHQGNDVFPIPGTTKIKNLEQNIEA
LYIKLTNEDMVELESIASADAVKGERDASSASTYKNSDTPLLSTWNAAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400042840
Transcript Infomation

pacid=37458518 locus=PGSC0003DMG400016620 ID=PGSC0003DMT400042840.v4.03 annot-version=v4.03
Sequence

ATGGCTGCAGAAGGAATTAAAAAAGTGCCAAGAATGAAGATGGGCTCACAAGGCCTTGAA
GTATCAGCTCAAGGGCTGGGCTGTATGGGTATGTCTGCATTTTATGGGCCCCCAAAACCT
GATGATGAAATGATCAAACTTATTCACCATTCCATTAATTCTGGTATCACTTTTCTTGAT
ACTTCAGATATATATGGGCCTTACACAAATGAAATTCTCATAGGGAAGGCTTTGAAGGGA
GAGACGAGAGAACGAGTTGAGTTGGCAACAAAGTTTGGAATTAATGCTTCTGCAGATGGA
AAAATAGAAATAATTGGAGATCCCTGCTATGTTAGAGCTTCATGTGAAGCCAGCTTAAAG
CGACTTGATGTTAACTGCATCGATTTATACTATCAACATCGGATCGATACACGTGTGCCA
ATTGAAATCACAATGGGAGAACTTAAGAAGCTAGTCGAAGAGGGTAAAATAAGATACATA
GGTCTCTCTGAGGCTTCAGGCTCGACGATCAGGAGAGCACACGAAGTTCATCCAATAACA
GCAGTACAGTTAGAATGGTCCCTATGGTCGAGAGATGTAGAGGAAGAAATAATTCCTATT
TGCAGGGAGCTTGGAATTGGAATTGTAGCATATAGTCCCTTAGGTAAAGGGTTTTTGTCA
TCAGGTCCAAAGCTGCTCGAGGATCTGTCAAATGAAGACTTTCGGAAGCATATACCAAGG
TTTCAAGCTGAGAATCTCGAGCATAACAAGATCTTATACAAGAGAATTTGTCAAATGGCA
ACGAAGAAGGGATGTACGCCATCTCAACTAGCCTTAGCCTGGGTACATCACCAAGGAAAT
GACGTGTTCCCCATCCCAGGTACTACTAAGATCAAAAACCTCGAACAGAACATCGAAGCT
CTGTACATTAAGTTAACAAATGAAGACATGGTGGAGCTTGAATCCATTGCTTCAGCTGAT
GCAGTGAAAGGTGAAAGAGATGCTTCTAGTGCAAGTACTTATAAAAACTCTGATACTCCA
CTTTTGTCAACTTGGAATGCTGCGCGATAA