Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042837
CDS Infomation

pacid=37458137 polypeptide=PGSC0003DMP400029054 locus=PGSC0003DMG400016619 ID=PGSC0003DMT400042837.v4.03 annot-version=v4.03
Sequence

ATGAATTATTATATACTTGTGTTGACATCAATTTTTGCTTTGATTTTTCTAGCAAAATTG
TCCAGTAGGGGCACCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAAT
CTTCACTTATTAGGTGCAAAACCTCATGAATCACTAGCCAATCTTGCAAAAACTTATGGT
CCAATTATGAGTTTAAAAATAGGACAAATGAGAATAGTGGTTATTTCTTCATCGATCATG
GCAAAACAAGTCCTTCAAAAACAAGACTTAGACTTTTCAAGTAGATTTATTCCTAAGGTA
GTTCAAGCACAAAACTATTGGGATTTTTCTGTGGTATGGCTTCCTGTTTGTCCTCAATGG
AGAACAATTAAGAGAATTTTGAACACAAATATCTTTTCTTACAAAAGGCTTGATGCAAAT
CAACATCTAAGGTCTCAAAAAGTGAAAGAATTGATTGCTTATTGTGAAAAATGTAGTCAA
CAAGGTGAAGCTTTGAATGTAGGTCATGTTGCTTTCAAGACTATTATCAATATGTTGTCA
AACACCCTTTTCTCTAAGGACTTGGTTGACCATTTATCGAATTCTAAGGTCGAGTTGAAG
GACGCGATCTTTGGCATCATACATGAGGCTGGTAAGATCAACCTAGTGGATTTTTTTCCC
ATACTAGAAAAGATTGATCCTCAAAGAATAAGGTATCACGCAAACATCTATTTTGATAAG
TTGTCTAAGCTTTTTGATGATTTGATAAATGAGAGACTGGAGGAAAAGAAAATGAACCAT
GATGAAAAGAGTGATGTTTTGGAAGCGGTTCTCAACCACAGTGCACAAAATCCCAAAGAG
ATCGATCAAAATCATATAAAATCCATGTTCCTAGACTTAATTGTTGGTGGTACTGATACA
TCTACAATTACATTAGAATGGGCAATGGCAGAAATACTAAGACAACCAGAGATTATGAAG
AAAGCCCAAGCTGAGCTTGCACAAGTCATTGGAAAAGGAAAACCAATAGAGGAAGTTGAT
GTATCCCGACTCCCTTACTTGCAATTTATCGTCAAAGAAACATTAAGAATGCACCCACCA
TCTCCATTCTTAGTCCCCCGCAGAGTAGACCAGGATGTTGAATTGTGTGACTATATCATC
CCCAAGGGTTCACTAGTACTAGTGAACGCATGGGCAATTGGTCGAGATTCTACTTTTTGG
GAGGACCCTTTGGTATTTAAACCTGAGAGATTCCAGAGTTTAGAATTAGATGTGCGAGGA
AAAGATTTTGAATTTATTCCATTTGGTGCTGGTCGAAGAATATGCCCTGGCTTGCCACTT
GCATTGAGAATGGTCCCGGTAATGTTGGGCTCGATGTTGAATTCGTTCAATTGGAAACTT
GAGTCTGGCATTGAGCCAAAAGATTTAGACATGAATGAGAAATTTGGTTTCATCACACCC
AAAGCTCATCCATTACTAGCTATCCCATCTCCTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029054
PEP Infomation

pacid=37458137 transcript=PGSC0003DMT400042837 locus=PGSC0003DMG400016619 ID=PGSC0003DMT400042837.v4.03 annot-version=v4.03
Sequence

MNYYILVLTSIFALIFLAKLSSRGTKKLPPGPSPWPIIGNLHLLGAKPHESLANLAKTYG
PIMSLKIGQMRIVVISSSIMAKQVLQKQDLDFSSRFIPKVVQAQNYWDFSVVWLPVCPQW
RTIKRILNTNIFSYKRLDANQHLRSQKVKELIAYCEKCSQQGEALNVGHVAFKTIINMLS
NTLFSKDLVDHLSNSKVELKDAIFGIIHEAGKINLVDFFPILEKIDPQRIRYHANIYFDK
LSKLFDDLINERLEEKKMNHDEKSDVLEAVLNHSAQNPKEIDQNHIKSMFLDLIVGGTDT
STITLEWAMAEILRQPEIMKKAQAELAQVIGKGKPIEEVDVSRLPYLQFIVKETLRMHPP
SPFLVPRRVDQDVELCDYIIPKGSLVLVNAWAIGRDSTFWEDPLVFKPERFQSLELDVRG
KDFEFIPFGAGRRICPGLPLALRMVPVMLGSMLNSFNWKLESGIEPKDLDMNEKFGFITP
KAHPLLAIPSPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400042837
Transcript Infomation

pacid=37458137 locus=PGSC0003DMG400016619 ID=PGSC0003DMT400042837.v4.03 annot-version=v4.03
Sequence

ATGAATTATTATATACTTGTGTTGACATCAATTTTTGCTTTGATTTTTCTAGCAAAATTG
TCCAGTAGGGGCACCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAAT
CTTCACTTATTAGGTGCAAAACCTCATGAATCACTAGCCAATCTTGCAAAAACTTATGGT
CCAATTATGAGTTTAAAAATAGGACAAATGAGAATAGTGGTTATTTCTTCATCGATCATG
GCAAAACAAGTCCTTCAAAAACAAGACTTAGACTTTTCAAGTAGATTTATTCCTAAGGTA
GTTCAAGCACAAAACTATTGGGATTTTTCTGTGGTATGGCTTCCTGTTTGTCCTCAATGG
AGAACAATTAAGAGAATTTTGAACACAAATATCTTTTCTTACAAAAGGCTTGATGCAAAT
CAACATCTAAGGTCTCAAAAAGTGAAAGAATTGATTGCTTATTGTGAAAAATGTAGTCAA
CAAGGTGAAGCTTTGAATGTAGGTCATGTTGCTTTCAAGACTATTATCAATATGTTGTCA
AACACCCTTTTCTCTAAGGACTTGGTTGACCATTTATCGAATTCTAAGGTCGAGTTGAAG
GACGCGATCTTTGGCATCATACATGAGGCTGGTAAGATCAACCTAGTGGATTTTTTTCCC
ATACTAGAAAAGATTGATCCTCAAAGAATAAGGTATCACGCAAACATCTATTTTGATAAG
TTGTCTAAGCTTTTTGATGATTTGATAAATGAGAGACTGGAGGAAAAGAAAATGAACCAT
GATGAAAAGAGTGATGTTTTGGAAGCGGTTCTCAACCACAGTGCACAAAATCCCAAAGAG
ATCGATCAAAATCATATAAAATCCATGTTCCTAGACTTAATTGTTGGTGGTACTGATACA
TCTACAATTACATTAGAATGGGCAATGGCAGAAATACTAAGACAACCAGAGATTATGAAG
AAAGCCCAAGCTGAGCTTGCACAAGTCATTGGAAAAGGAAAACCAATAGAGGAAGTTGAT
GTATCCCGACTCCCTTACTTGCAATTTATCGTCAAAGAAACATTAAGAATGCACCCACCA
TCTCCATTCTTAGTCCCCCGCAGAGTAGACCAGGATGTTGAATTGTGTGACTATATCATC
CCCAAGGGTTCACTAGTACTAGTGAACGCATGGGCAATTGGTCGAGATTCTACTTTTTGG
GAGGACCCTTTGGTATTTAAACCTGAGAGATTCCAGAGTTTAGAATTAGATGTGCGAGGA
AAAGATTTTGAATTTATTCCATTTGGTGCTGGTCGAAGAATATGCCCTGGCTTGCCACTT
GCATTGAGAATGGTCCCGGTAATGTTGGGCTCGATGTTGAATTCGTTCAATTGGAAACTT
GAGTCTGGCATTGAGCCAAAAGATTTAGACATGAATGAGAAATTTGGTTTCATCACACCC
AAAGCTCATCCATTACTAGCTATCCCATCTCCTCTTTGA