Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042832
CDS Infomation

pacid=37457018 polypeptide=PGSC0003DMP400029051 locus=PGSC0003DMG401016617 ID=PGSC0003DMT400042832.v4.03 annot-version=v4.03
Sequence

ATGGATCAATCTACACTTGTTTTTGGATCAATTTTTGCCTTGAGCTTTCTTTATATTATA
GCAAATATATGCAATAAAGGCAACAACAAAGTTCCACCAGGTCCATCACCATGGCCAATA
ATTGGAAATCTTCACTTATTAGGTGCAAAACCTCATGCATCACTAGCCAATCTTGCAAAA
ATTTATGGTCCAATTATGAGTTTAAAATTAGGACAAATAACAACAATAGTTATTTCTTCA
TCATCCATGGCAAAACAAGTCCTCAAAATTCAAGATCAAGCTTTTTCTACAAGATTTATT
CCTAATGCTCTTCAAGCACACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGT
CCTCAATGGCGAACGCTTCGCAGAATATTGAACACTAACCTCCTCTCTTCCAATAGGCTT
GATGCAAATCAACATCTAAGATCTCAAAAGGTGAAACAATTGATTGCTTATTGTGACATA
TGTAGTCTACAAGGTGAAGCTTTGGATATAGGTCAAGTTGCTTTCAAGACTAATCTCAAC
TTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGACCCTTTTTCAGATTCAAAGGTA
GAGTTGAAGGAAGTTATATGGGGTGTCATGGCTGAGGTAGGGAAGCCTAATCTAGTAGAT
TTTTTTCCCATACTTAAAAAGATTGATCTTCAAGGAATAAGACGTCGCACAATCATTCAT
TTTAGTAAGTTGTTTAAACTTTTTGATGGTTTGATCAATGAGCGATTGGAGGAAAAGAGA
AGATCAGGATTCACAGAAAAGAGTGATGTTCTGGAAATGTTTCTTAATATTACTGAAAAA
AATCCTGAAGATATTGATCATAATCACATCAAGTCCATGTTCCTGGACCTATTTGGTGCG
GGTACTGATACAACTACAAGCACATTAGAATGGGCAATGACAGAATTGCTTAAACAACCT
GAGATAATAAAAAAAGCTCAAGTTGAACTCGCAGAAACCATTGGAAAAGGAAAACCAATA
GAAGAAACTGATGTTTCTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGA
CTGCACCCACCAATTCCGCTCTTACTTCCGCGCAAAGTAGAGCAAGATGTTGAATTGTGT
GACTACATCATTCCCAAGGGCTCACAGGTACTAGTTAATGTGTGGACGATTGGTCGAGAT
TTTACTTTTTGGAAGGATCCTTTAGTGTTTAAACCCGAGAGATTTTTGAGTTTGAATTTG
GACACGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCGGGGAGAAGAATATGCCCT
GGCTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTCTTGAATTCATTC
AATTGGAAACTTGAAGCAGGCATTGAGCCACAAGCATTAGACATGGAGGAGAAGTTTGGT
ATCACCTTAGCCAAAGCTCGTCCTTTGCGAGCTATCCCCTCTCCTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029051
PEP Infomation

pacid=37457018 transcript=PGSC0003DMT400042832 locus=PGSC0003DMG401016617 ID=PGSC0003DMT400042832.v4.03 annot-version=v4.03
Sequence

MDQSTLVFGSIFALSFLYIIANICNKGNNKVPPGPSPWPIIGNLHLLGAKPHASLANLAK
IYGPIMSLKLGQITTIVISSSSMAKQVLKIQDQAFSTRFIPNALQAHNHYKFSVAWLPVC
PQWRTLRRILNTNLLSSNRLDANQHLRSQKVKQLIAYCDICSLQGEALDIGQVAFKTNLN
LLSNTLFSKDLADPFSDSKVELKEVIWGVMAEVGKPNLVDFFPILKKIDLQGIRRRTIIH
FSKLFKLFDGLINERLEEKRRSGFTEKSDVLEMFLNITEKNPEDIDHNHIKSMFLDLFGA
GTDTTTSTLEWAMTELLKQPEIIKKAQVELAETIGKGKPIEETDVSRLPYLQCIIKETLR
LHPPIPLLLPRKVEQDVELCDYIIPKGSQVLVNVWTIGRDFTFWKDPLVFKPERFLSLNL
DTRGQDFELIPFGAGRRICPGLPLALRMIPVMLGSLLNSFNWKLEAGIEPQALDMEEKFG
ITLAKARPLRAIPSPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400042832
Transcript Infomation

pacid=37457018 locus=PGSC0003DMG401016617 ID=PGSC0003DMT400042832.v4.03 annot-version=v4.03
Sequence

ATGGATCAATCTACACTTGTTTTTGGATCAATTTTTGCCTTGAGCTTTCTTTATATTATA
GCAAATATATGCAATAAAGGCAACAACAAAGTTCCACCAGGTCCATCACCATGGCCAATA
ATTGGAAATCTTCACTTATTAGGTGCAAAACCTCATGCATCACTAGCCAATCTTGCAAAA
ATTTATGGTCCAATTATGAGTTTAAAATTAGGACAAATAACAACAATAGTTATTTCTTCA
TCATCCATGGCAAAACAAGTCCTCAAAATTCAAGATCAAGCTTTTTCTACAAGATTTATT
CCTAATGCTCTTCAAGCACACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGT
CCTCAATGGCGAACGCTTCGCAGAATATTGAACACTAACCTCCTCTCTTCCAATAGGCTT
GATGCAAATCAACATCTAAGATCTCAAAAGGTGAAACAATTGATTGCTTATTGTGACATA
TGTAGTCTACAAGGTGAAGCTTTGGATATAGGTCAAGTTGCTTTCAAGACTAATCTCAAC
TTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGACCCTTTTTCAGATTCAAAGGTA
GAGTTGAAGGAAGTTATATGGGGTGTCATGGCTGAGGTAGGGAAGCCTAATCTAGTAGAT
TTTTTTCCCATACTTAAAAAGATTGATCTTCAAGGAATAAGACGTCGCACAATCATTCAT
TTTAGTAAGTTGTTTAAACTTTTTGATGGTTTGATCAATGAGCGATTGGAGGAAAAGAGA
AGATCAGGATTCACAGAAAAGAGTGATGTTCTGGAAATGTTTCTTAATATTACTGAAAAA
AATCCTGAAGATATTGATCATAATCACATCAAGTCCATGTTCCTGGACCTATTTGGTGCG
GGTACTGATACAACTACAAGCACATTAGAATGGGCAATGACAGAATTGCTTAAACAACCT
GAGATAATAAAAAAAGCTCAAGTTGAACTCGCAGAAACCATTGGAAAAGGAAAACCAATA
GAAGAAACTGATGTTTCTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGA
CTGCACCCACCAATTCCGCTCTTACTTCCGCGCAAAGTAGAGCAAGATGTTGAATTGTGT
GACTACATCATTCCCAAGGGCTCACAGGTACTAGTTAATGTGTGGACGATTGGTCGAGAT
TTTACTTTTTGGAAGGATCCTTTAGTGTTTAAACCCGAGAGATTTTTGAGTTTGAATTTG
GACACGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCGGGGAGAAGAATATGCCCT
GGCTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTCTTGAATTCATTC
AATTGGAAACTTGAAGCAGGCATTGAGCCACAAGCATTAGACATGGAGGAGAAGTTTGGT
ATCACCTTAGCCAAAGCTCGTCCTTTGCGAGCTATCCCCTCTCCTCTTTGA