Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042818
CDS Infomation

pacid=37454967 polypeptide=PGSC0003DMP400029040 locus=PGSC0003DMG400016613 ID=PGSC0003DMT400042818.v4.03 annot-version=v4.03
Sequence

ATGGATTCTATGCATCTGTCACACTGTTATTCAGCTCTAAATGTGAAAAAGAGACAACCC
CAGATCAAGATTTCGAAGCAATTCAATGTTGTTCATCAGATAAGTCATAGAAGTGTGAGA
AATTTGACCCTTTTGCCTACAAGAAATTTGGGTTTTTTCATGGATCGTAGGGTTAAAGGA
ATTGTCTGTGGGGTGTCTTCTGTTGAAACCAGGGAAAACCAAAATAAAGGAAAGAATAAA
AATAATTCTGGATCATCTACTGAGAAGGTTCAGCTACGTTTTCGGCTTGATCACCAAGTC
GAATATGGGGAGCACATTGCAGTTTTGGGATCGGCCAAAGAATTAGGGTCCTGGAAGAAG
AATATAATGATGGATTGGACAGAAAATGGATGGATTGGTGAATTGGAAGTACGATCTGGC
GAGACTCTTGAGTATAAGTTTGTAATTGTTGGTAAGGACAAGAAAATGTTATGGGAAAAC
GGCAGTAATCGGATCTTGAAGCTACCAGAAGGAGGAGGTTTTGAACTGGTCTGTCAATGG
AATGTGACAGATGAGCCTGTGAATTTGTTGCCATTAGATCCATTTGAGGTAGAGAAGGTA
GTAGAAGAGACAAGTGATAATGGAGCTAAAATTATTAGCCAGGCAGCTGTTCCTGACGTA
GTAACAAGTCCGTTTGTGGAGCAATGGCAAGGGAGGGCTGCATCTTTTGTACGTTCAAAC
GACCAGCTGGATTCTGATAAAAACAGGAAGTGGGACACATCAGGTCTCACCGGAATTTCC
CTAAAGCTTGTTGAAGGTGATAAAAATGCTCGGAATTGGTGGCGGAAGCTTGAGGTTGTT
CGAGAACTCGTTGTTGAAAATATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCA
GCTGTCTATCTAAAGTGGATAAACACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCAC
CACCGACCAAATAGGCACGCAGAGATTTCCAGGCTTATATTTCGGGAAGTAGAAAAAGTC
TTGAGCAGGAGAGACACTACGCTTCAGGAAATACTTGTGATCCGGAAGATGCAACCGTGC
TTGCCTTCTTTTAAAGCAGAATTCACTGCATCTGTTCCTTTAACGAGAATCAGGGACATT
GCTCATAGGAATGATATTCCGCATGATCTTAAGCAAGAGATCAAACATACTATACAAAAC
AAACTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGA
ATTACCAAGCAACCTGGACAATATAGTGAGGCATTTGTAGAACAATTCAAGATTTTCCAC
AATGAACTAAAAGATTTCTTCAATGCTGGGAGTCTTGATGAACAACTGGAATCTATGAGA
GAATCACTCGATGGAAGTAGCTTGTCAATGCTTTCATCATTCTTGGAGTCCAAAAAGGAA
TTGGTTAGATTGGATGAAAAACATAATGTTTCAGAGACTGAAAGAACTGGAATTCTAGTC
AGGACTATTAACTCTCTGAATGCTCTTCGTGAAGTAATTGCCAAGGGTCTTGAAAGTGGC
CTCCGAAATGATGCTCCGGATGCTTCAATAGCTATGCGTCAGAAGTGGCGTCTCTGCGAA
ATCGGGCTTGAAGACTATGCATTTGTTCTTTTGAGCAGGTTTGTGAATGCAGTTGAAGCT
CTAGGCGGAGCTGATTGGCTTGCAGAGAATGTAACAGTGAAAAACATTAGTTCTTGGAAT
GATCCAATTGGAGCACTTACAGTTGGAATCCAACAGCTAGGTATATCTGGTTGGAAGCCC
GAGGAATGCAAAGCTGTTGGAAATGAACTTTTGTCATGGAAAGAAAGGGGTATTTCAGAA
ATTGAAGGCAGCGAAGATGGTAAGACTATATGGGCATTAAGACTAAAAGCGACTCTTGAT
AGAAGTCGAAGGTTAACTGAGGAGTATTCCGAGACACTTCTCCAAATATTCCCTGAAAAA
GTACAGATTTTAGGAAAATCTTTGGGGATTCCTGAAAATACTGTCAGAACATTCACTGAA
GCTGAAATTCGAGCAGGTGTGGTTTTTCAGGTTTCGAAGCTTGCTACACTACTTTTGAAG
GCTGTTAGAAGGACAATTGGGTCTTCGGGATGGGATGTTCTCGTTCCAGGAGATGCTTTT
GGAGAGCTAATACAGGTGGATAGAATTATCCCTGGGACTCTACCATCATCGGCAACAGGA
CCTGTTATTCTTGTAGTCAACAAAGCTGATGGAGATGAAGAGGTGACTGCAGCAGGGAGT
AACATATCTGGAGTTGTACTTCTACAGGAGCTACCACATTTATCTCATCTAGGTGTTAGG
GCCCGGCAGGAAAAGGTAGTTTTTGTGACCTGCGACGACGATGACAAAGTTTCTGATGTA
AGACAGCTACTAGGAAAATATGTGAGGTTAGAAGCATCATCAACTGGTGTAAAGTTAACT
GCTTCTTCATCAGAGAAGGCGGGCGGTGTTTCTCCAAATAAACTTCCTTCAAGTAATGCT
TCTTCTGCAGGTGCAACCTCATCAGACAGCAGTGCTTCCTCAATTGCTGTCAAATCATCT
CAAGTTAAAGAGGTTGGACCTACCAGAGGTGTTATTCCTCTTGTTGATGCAGATATACAA
ACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCATTTCTTCTACT
AAAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAACGTTCCTGCAGGAGCAGTTATT
CCATTTGGTTCCATGGAAACGGCATTGGAAATGAACAAGTTAATGGAGACCTTCACATTG
CTTGTCGAACAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACATTGTGAG
GATCTCCAGAAGTTAATATCTTCTCTATTGCCTGGACAAGATGTCATTGAAAGCTTGGGA
GAAGTATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTG
GCGGGGATGTCAGCTGCTGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCG
ATAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTA
CTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGACGCTACAATGGCCGTGCTAGTGCAA
GAAATGCTTTCACCAGATTTATCTTTCGTCCTCCACACACTGAGCCCAACGGACAACAAT
CATAACTTCATTGAGGCTGAAATTGCACCTGGACTCGGTGAAACACTCGCTTCAGGAACA
AGGGGTACACCGTGGCGTCTATCTAGTGGTAAATTTGACGACACAGTGCGCACACTGGCA
TTCGCCAACTTTAGTGAGGAGATGGTTGTAGGTGGCAATTCCCCTGCTGACGGAGAAGTT
ATTCTCTTGACTGTCGATTATAGCAAGAAACCTTTAACAATCGACCCCATTTTCAGACGT
CAGCTTGGTCAGAGGCTTGGCGCTGTTGGTTTCTACCTAGAACGCAAGTTTGGTTCTCCT
CAAGATGTCGAAGGATGTTTGGTTGGTAACGAGATTTTCATCGTGCAATCGCGACCTCAA
CCCCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029040
PEP Infomation

pacid=37454967 transcript=PGSC0003DMT400042818 locus=PGSC0003DMG400016613 ID=PGSC0003DMT400042818.v4.03 annot-version=v4.03
Sequence

MDSMHLSHCYSALNVKKRQPQIKISKQFNVVHQISHRSVRNLTLLPTRNLGFFMDRRVKG
IVCGVSSVETRENQNKGKNKNNSGSSTEKVQLRFRLDHQVEYGEHIAVLGSAKELGSWKK
NIMMDWTENGWIGELEVRSGETLEYKFVIVGKDKKMLWENGSNRILKLPEGGGFELVCQW
NVTDEPVNLLPLDPFEVEKVVEETSDNGAKIISQAAVPDVVTSPFVEQWQGRAASFVRSN
DQLDSDKNRKWDTSGLTGISLKLVEGDKNARNWWRKLEVVRELVVENMDSSHRLEALTYA
AVYLKWINTGQIPCLEDGGHHRPNRHAEISRLIFREVEKVLSRRDTTLQEILVIRKMQPC
LPSFKAEFTASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLVSTEAMLER
ITKQPGQYSEAFVEQFKIFHNELKDFFNAGSLDEQLESMRESLDGSSLSMLSSFLESKKE
LVRLDEKHNVSETERTGILVRTINSLNALREVIAKGLESGLRNDAPDASIAMRQKWRLCE
IGLEDYAFVLLSRFVNAVEALGGADWLAENVTVKNISSWNDPIGALTVGIQQLGISGWKP
EECKAVGNELLSWKERGISEIEGSEDGKTIWALRLKATLDRSRRLTEEYSETLLQIFPEK
VQILGKSLGIPENTVRTFTEAEIRAGVVFQVSKLATLLLKAVRRTIGSSGWDVLVPGDAF
GELIQVDRIIPGTLPSSATGPVILVVNKADGDEEVTAAGSNISGVVLLQELPHLSHLGVR
ARQEKVVFVTCDDDDKVSDVRQLLGKYVRLEASSTGVKLTASSSEKAGGVSPNKLPSSNA
SSAGATSSDSSASSIAVKSSQVKEVGPTRGVIPLVDADIQTSGAKAASCAQLASLAISST
KVYSDQGAPASFNVPAGAVIPFGSMETALEMNKLMETFTLLVEQIETAEIDGGELDKHCE
DLQKLISSLLPGQDVIESLGEVFPGNARLIVRSSANVEDLAGMSAAGLYDSIPNVSPSDP
IRFGHAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDNN
HNFIEAEIAPGLGETLASGTRGTPWRLSSGKFDDTVRTLAFANFSEEMVVGGNSPADGEV
ILLTVDYSKKPLTIDPIFRRQLGQRLGAVGFYLERKFGSPQDVEGCLVGNEIFIVQSRPQ
PQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400042818
Transcript Infomation

pacid=37454967 locus=PGSC0003DMG400016613 ID=PGSC0003DMT400042818.v4.03 annot-version=v4.03
Sequence

ATGGATTCTATGCATCTGTCACACTGTTATTCAGCTCTAAATGTGAAAAAGAGACAACCC
CAGATCAAGATTTCGAAGCAATTCAATGTTGTTCATCAGATAAGTCATAGAAGTGTGAGA
AATTTGACCCTTTTGCCTACAAGAAATTTGGGTTTTTTCATGGATCGTAGGGTTAAAGGA
ATTGTCTGTGGGGTGTCTTCTGTTGAAACCAGGGAAAACCAAAATAAAGGAAAGAATAAA
AATAATTCTGGATCATCTACTGAGAAGGTTCAGCTACGTTTTCGGCTTGATCACCAAGTC
GAATATGGGGAGCACATTGCAGTTTTGGGATCGGCCAAAGAATTAGGGTCCTGGAAGAAG
AATATAATGATGGATTGGACAGAAAATGGATGGATTGGTGAATTGGAAGTACGATCTGGC
GAGACTCTTGAGTATAAGTTTGTAATTGTTGGTAAGGACAAGAAAATGTTATGGGAAAAC
GGCAGTAATCGGATCTTGAAGCTACCAGAAGGAGGAGGTTTTGAACTGGTCTGTCAATGG
AATGTGACAGATGAGCCTGTGAATTTGTTGCCATTAGATCCATTTGAGGTAGAGAAGGTA
GTAGAAGAGACAAGTGATAATGGAGCTAAAATTATTAGCCAGGCAGCTGTTCCTGACGTA
GTAACAAGTCCGTTTGTGGAGCAATGGCAAGGGAGGGCTGCATCTTTTGTACGTTCAAAC
GACCAGCTGGATTCTGATAAAAACAGGAAGTGGGACACATCAGGTCTCACCGGAATTTCC
CTAAAGCTTGTTGAAGGTGATAAAAATGCTCGGAATTGGTGGCGGAAGCTTGAGGTTGTT
CGAGAACTCGTTGTTGAAAATATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCA
GCTGTCTATCTAAAGTGGATAAACACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCAC
CACCGACCAAATAGGCACGCAGAGATTTCCAGGCTTATATTTCGGGAAGTAGAAAAAGTC
TTGAGCAGGAGAGACACTACGCTTCAGGAAATACTTGTGATCCGGAAGATGCAACCGTGC
TTGCCTTCTTTTAAAGCAGAATTCACTGCATCTGTTCCTTTAACGAGAATCAGGGACATT
GCTCATAGGAATGATATTCCGCATGATCTTAAGCAAGAGATCAAACATACTATACAAAAC
AAACTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGA
ATTACCAAGCAACCTGGACAATATAGTGAGGCATTTGTAGAACAATTCAAGATTTTCCAC
AATGAACTAAAAGATTTCTTCAATGCTGGGAGTCTTGATGAACAACTGGAATCTATGAGA
GAATCACTCGATGGAAGTAGCTTGTCAATGCTTTCATCATTCTTGGAGTCCAAAAAGGAA
TTGGTTAGATTGGATGAAAAACATAATGTTTCAGAGACTGAAAGAACTGGAATTCTAGTC
AGGACTATTAACTCTCTGAATGCTCTTCGTGAAGTAATTGCCAAGGGTCTTGAAAGTGGC
CTCCGAAATGATGCTCCGGATGCTTCAATAGCTATGCGTCAGAAGTGGCGTCTCTGCGAA
ATCGGGCTTGAAGACTATGCATTTGTTCTTTTGAGCAGGTTTGTGAATGCAGTTGAAGCT
CTAGGCGGAGCTGATTGGCTTGCAGAGAATGTAACAGTGAAAAACATTAGTTCTTGGAAT
GATCCAATTGGAGCACTTACAGTTGGAATCCAACAGCTAGGTATATCTGGTTGGAAGCCC
GAGGAATGCAAAGCTGTTGGAAATGAACTTTTGTCATGGAAAGAAAGGGGTATTTCAGAA
ATTGAAGGCAGCGAAGATGGTAAGACTATATGGGCATTAAGACTAAAAGCGACTCTTGAT
AGAAGTCGAAGGTTAACTGAGGAGTATTCCGAGACACTTCTCCAAATATTCCCTGAAAAA
GTACAGATTTTAGGAAAATCTTTGGGGATTCCTGAAAATACTGTCAGAACATTCACTGAA
GCTGAAATTCGAGCAGGTGTGGTTTTTCAGGTTTCGAAGCTTGCTACACTACTTTTGAAG
GCTGTTAGAAGGACAATTGGGTCTTCGGGATGGGATGTTCTCGTTCCAGGAGATGCTTTT
GGAGAGCTAATACAGGTGGATAGAATTATCCCTGGGACTCTACCATCATCGGCAACAGGA
CCTGTTATTCTTGTAGTCAACAAAGCTGATGGAGATGAAGAGGTGACTGCAGCAGGGAGT
AACATATCTGGAGTTGTACTTCTACAGGAGCTACCACATTTATCTCATCTAGGTGTTAGG
GCCCGGCAGGAAAAGGTAGTTTTTGTGACCTGCGACGACGATGACAAAGTTTCTGATGTA
AGACAGCTACTAGGAAAATATGTGAGGTTAGAAGCATCATCAACTGGTGTAAAGTTAACT
GCTTCTTCATCAGAGAAGGCGGGCGGTGTTTCTCCAAATAAACTTCCTTCAAGTAATGCT
TCTTCTGCAGGTGCAACCTCATCAGACAGCAGTGCTTCCTCAATTGCTGTCAAATCATCT
CAAGTTAAAGAGGTTGGACCTACCAGAGGTGTTATTCCTCTTGTTGATGCAGATATACAA
ACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCATTTCTTCTACT
AAAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAACGTTCCTGCAGGAGCAGTTATT
CCATTTGGTTCCATGGAAACGGCATTGGAAATGAACAAGTTAATGGAGACCTTCACATTG
CTTGTCGAACAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACATTGTGAG
GATCTCCAGAAGTTAATATCTTCTCTATTGCCTGGACAAGATGTCATTGAAAGCTTGGGA
GAAGTATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTG
GCGGGGATGTCAGCTGCTGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCG
ATAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTA
CTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGACGCTACAATGGCCGTGCTAGTGCAA
GAAATGCTTTCACCAGATTTATCTTTCGTCCTCCACACACTGAGCCCAACGGACAACAAT
CATAACTTCATTGAGGCTGAAATTGCACCTGGACTCGGTGAAACACTCGCTTCAGGAACA
AGGGGTACACCGTGGCGTCTATCTAGTGGTAAATTTGACGACACAGTGCGCACACTGGCA
TTCGCCAACTTTAGTGAGGAGATGGTTGTAGGTGGCAATTCCCCTGCTGACGGAGAAGTT
ATTCTCTTGACTGTCGATTATAGCAAGAAACCTTTAACAATCGACCCCATTTTCAGACGT
CAGCTTGGTCAGAGGCTTGGCGCTGTTGGTTTCTACCTAGAACGCAAGTTTGGTTCTCCT
CAAGATGTCGAAGGATGTTTGGTTGGTAACGAGATTTTCATCGTGCAATCGCGACCTCAA
CCCCAGTGA