Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042807
CDS Infomation

pacid=37457318 polypeptide=PGSC0003DMP400029036 locus=PGSC0003DMG400016611 ID=PGSC0003DMT400042807.v4.03 annot-version=v4.03
Sequence

ATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGCCACATTGTATCAGCCATTGAA
TTTGCAAAACAAATTCTAAATAGAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAA
CTTCCTTTAGACTATGGTGTTCATAATTTTATTCAATCACTCACTTCTCAACCTCGTTTA
AAATTCATCGATATCTCCCTAGACGAAAAAACATCATCTGGATTCCTCAATAACCATGAA
ACATTCCTCTATAATTTCATCGATGGTCACAAATCACTCGTACGTGAATATGTTCACAAC
ATTTGTAAAACAAGTTCATGTTATGGTTTTATTCTTGACATGTTTTGTACCTCGATGATT
GACATAGCTAACGAATTTAATGTCCCTAGTTACATTTACTTTGCTTCAAACGCTTCTTTT
CTTGGCTTATGTCTTCATTTCGAGACCTTAAGAAATGAACAACACTCAGATACGTCCAGG
TACATGAACTCTAACGAGGCATTATCAATCCCAAGTTTTAAAAATCTTTGTCCTACTAAA
GTTTTACCTAAGCATTTGTTAGATTCAAGACTTGCCTCAACGTTGTTTTTTGATGGAATT
TGTCGATTTAAAGAGACTAAAGGGATTATTGTTAACACTTTTTTCGAGCTTGAATCGTTT
TCTCTTCAGGCTCTTTCGGATTCTAAGATGGTTCCAAAAATTTATCCAGTTGGTCCAGTG
GTTAGTTTTGAAAAAAGTAGCCATTTTAGAAATAATTCATTGGAGATTGAAAGTATTATT
AAGTGGTTAGATGATCAACAGGATTCCTCTGTTGTGTTTTTGTGTTTTGGTAGTATGGGA
AGTTTTGAAGCAGAACAGATCAAAGAAATAGCAACTGCACTGGAGCATTGTGGTCACAGG
TTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTAC
AACAACTATGAAGAAGTGTTGCCAAAAGGATTCTTAGAGAGAACAAAAGAAAGAGGAAAA
ATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTG
TCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACT
TGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTGTTAGTGAAAGAATTAGGACTT
GGTGAAGAGATAAAATTGGACTATGTTGTTGATTTTGAAGGAAAAAATAATCAAGTTGAT
ATAGTAAGTACTCAAGAAATTGGAAGTGGTTTATTAAAGTTGATGGTGAAAAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029036
PEP Infomation

pacid=37457318 transcript=PGSC0003DMT400042807 locus=PGSC0003DMG400016611 ID=PGSC0003DMT400042807.v4.03 annot-version=v4.03
Sequence

MKELIFIPLAGLGHIVSAIEFAKQILNRDENFSISFLIMELPLDYGVHNFIQSLTSQPRL
KFIDISLDEKTSSGFLNNHETFLYNFIDGHKSLVREYVHNICKTSSCYGFILDMFCTSMI
DIANEFNVPSYIYFASNASFLGLCLHFETLRNEQHSDTSRYMNSNEALSIPSFKNLCPTK
VLPKHLLDSRLASTLFFDGICRFKETKGIIVNTFFELESFSLQALSDSKMVPKIYPVGPV
VSFEKSSHFRNNSLEIESIIKWLDDQQDSSVVFLCFGSMGSFEAEQIKEIATALEHCGHR
FLWSLRKSPPKGKVDIPTSYNNYEEVLPKGFLERTKERGKIIGWAPQVTILSHPSIGGFV
SHCGWNSILESVHFGVPIATWPLYAEQQMNAFLLVKELGLGEEIKLDYVVDFEGKNNQVD
IVSTQEIGSGLLKLMVKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400042807
Transcript Infomation

pacid=37457318 locus=PGSC0003DMG400016611 ID=PGSC0003DMT400042807.v4.03 annot-version=v4.03
Sequence

ATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGCCACATTGTATCAGCCATTGAA
TTTGCAAAACAAATTCTAAATAGAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAA
CTTCCTTTAGACTATGGTGTTCATAATTTTATTCAATCACTCACTTCTCAACCTCGTTTA
AAATTCATCGATATCTCCCTAGACGAAAAAACATCATCTGGATTCCTCAATAACCATGAA
ACATTCCTCTATAATTTCATCGATGGTCACAAATCACTCGTACGTGAATATGTTCACAAC
ATTTGTAAAACAAGTTCATGTTATGGTTTTATTCTTGACATGTTTTGTACCTCGATGATT
GACATAGCTAACGAATTTAATGTCCCTAGTTACATTTACTTTGCTTCAAACGCTTCTTTT
CTTGGCTTATGTCTTCATTTCGAGACCTTAAGAAATGAACAACACTCAGATACGTCCAGG
TACATGAACTCTAACGAGGCATTATCAATCCCAAGTTTTAAAAATCTTTGTCCTACTAAA
GTTTTACCTAAGCATTTGTTAGATTCAAGACTTGCCTCAACGTTGTTTTTTGATGGAATT
TGTCGATTTAAAGAGACTAAAGGGATTATTGTTAACACTTTTTTCGAGCTTGAATCGTTT
TCTCTTCAGGCTCTTTCGGATTCTAAGATGGTTCCAAAAATTTATCCAGTTGGTCCAGTG
GTTAGTTTTGAAAAAAGTAGCCATTTTAGAAATAATTCATTGGAGATTGAAAGTATTATT
AAGTGGTTAGATGATCAACAGGATTCCTCTGTTGTGTTTTTGTGTTTTGGTAGTATGGGA
AGTTTTGAAGCAGAACAGATCAAAGAAATAGCAACTGCACTGGAGCATTGTGGTCACAGG
TTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTAC
AACAACTATGAAGAAGTGTTGCCAAAAGGATTCTTAGAGAGAACAAAAGAAAGAGGAAAA
ATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTG
TCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACT
TGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTGTTAGTGAAAGAATTAGGACTT
GGTGAAGAGATAAAATTGGACTATGTTGTTGATTTTGAAGGAAAAAATAATCAAGTTGAT
ATAGTAAGTACTCAAGAAATTGGAAGTGGTTTATTAAAGTTGATGGTGAAAAGTTAA