Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042741
CDS Infomation

pacid=37475336 polypeptide=PGSC0003DMP400029000 locus=PGSC0003DMG400016589 ID=PGSC0003DMT400042741.v4.03 annot-version=v4.03
Sequence

ATGGCAATTCACACTTGTTTCTCACTAATACCTTCTTCTTTCTCTTCTACCAAATTGCCA
TTCCCCAAAAACACTACTTTTCAATCTCCTATCCCAAAATTATCTAGACCCACTTTCATG
TTTGATCGGAAAGGTTCCTTTCAAAATGGCACCGCTGCCGTTCCTGCTGTAGGTGAGGAT
TTTCCGATTGATTATGCTGATTGGTTGCCAAAACGAGACCCAAACGATCGTAGAAGAGCT
GGAATTTTGCTCCATCCGACGTCGTTTCCTGGACCTTATGGTATTGGTGACCTTGGCCCT
CAGGCTTTTAAGTTCCTTGATTGGCTTCATCTTGCTGGTTGCTCCCTTTGGCAGGTTCTT
CCACTTGTACCGCCTGGAAAGAGAGGCAATGAAGATGGATCACCCTATTCAGGACAGGAT
GCAAATTGTGGAAACACACTTCTGATTTCTCTTGAAGAGCTTGTTGATGATGGTTTACTG
AAGAAGGAGGAGCTTCCGGAGCCACTACCTACAGATCGTGTCAATTACTCGACTATATCT
GAGATAAAAGATCCTTTAATAACCAAGGCAGCAAAGAGGCTTCTTTCCAGTGAAGGGGAA
CTGAAAGACCAGCTCGAGAACTTTCGCCGGGATCCAAATATTTCGAGTTGGCTGGAGGAT
GCTGCTTATTTTGCTGCCATAGACAACTCTGTAAACACTATTAGCTGGTATGATTGGCCT
GAACCATTGAAAAATCGCCATCTTGCAGCTCTAGAAGAAGTTTATCAAAGTGAAAAGGAT
TTTATTGACATATTCATTGCACAACAGTTCTTGTTCCAACGACAATGGAAAAAAGTTCGT
GACTATGCACGATCCAAAGGAATCAGTATAATGGGAGACATGCCAATATATGTTGGATAT
CACAGTGCTGATGTTTGGGCCAACAAGAAACAATTTTTGCTGAATAGGAAAGGTTTCCCT
CTTATAGTTAGTGGTGTTCCTCCAGACGCCTTTAGTGAAACTGGTCAACTATGGGGCAGC
CCTCTCTATGATTGGAAAGCCATGGAGAAGGATGGATTTTCATGGTGGGTATGCCGAATT
CAACGTGCAACGGATCTTTTTGATGAATTTAGGATAGATCACTTTAGAGGATTTGCTGGA
TTTTGGGCTGTTCCTTCTGAGGAAAAAATTGCAATTCTGGGACGGTGGAAGGTGGGACCT
GGAAAACCTTTGTTTGATGCTATCTTACAAGCTGTTGGGAAGATCAATATTATAGCAGAA
GACTTGGGAGTAATTACCGAGGACGTTGTTCAGCTAAGAAAGTCCATTGAGGCACCTGGA
ATGGCTGTACTCCAGTTTGCATTTGGCAGTGACGCTGAAAACCCTCATTTACCTCACAAT
CATGAGCAGAACCAAGTAGTGTATACTGGAACACATGACAATGATACGATCCGAGGTTGG
TGGGATACTTTGCCACAGGAAGAGAAATCCAATGTACTAAAGTATTTATCAAATATTGAG
GAAGAGGAAATATCATGGGGCTTGATCGAAGGTGCAGTTTCTTCTGTAGCCCGTATTGCA
ATTATACCGATGCAGGATGTTCTTGGGCTTGGGAGTGATTCCAGAATGAACATTCCAGCA
ACTCAGTTTGGAAACTGGAGTTGGAGGATACCTAGTTCAACTAGCTTTGACAACCTGGAT
GCAGAAGCAAAAAAGCTAAGAGATATACTTGCAACTTATGGGCGGTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029000
PEP Infomation

pacid=37475336 transcript=PGSC0003DMT400042741 locus=PGSC0003DMG400016589 ID=PGSC0003DMT400042741.v4.03 annot-version=v4.03
Sequence

MAIHTCFSLIPSSFSSTKLPFPKNTTFQSPIPKLSRPTFMFDRKGSFQNGTAAVPAVGED
FPIDYADWLPKRDPNDRRRAGILLHPTSFPGPYGIGDLGPQAFKFLDWLHLAGCSLWQVL
PLVPPGKRGNEDGSPYSGQDANCGNTLLISLEELVDDGLLKKEELPEPLPTDRVNYSTIS
EIKDPLITKAAKRLLSSEGELKDQLENFRRDPNISSWLEDAAYFAAIDNSVNTISWYDWP
EPLKNRHLAALEEVYQSEKDFIDIFIAQQFLFQRQWKKVRDYARSKGISIMGDMPIYVGY
HSADVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWVCRI
QRATDLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKVGPGKPLFDAILQAVGKINIIAE
DLGVITEDVVQLRKSIEAPGMAVLQFAFGSDAENPHLPHNHEQNQVVYTGTHDNDTIRGW
WDTLPQEEKSNVLKYLSNIEEEEISWGLIEGAVSSVARIAIIPMQDVLGLGSDSRMNIPA
TQFGNWSWRIPSSTSFDNLDAEAKKLRDILATYGRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400042741
Transcript Infomation

pacid=37475336 locus=PGSC0003DMG400016589 ID=PGSC0003DMT400042741.v4.03 annot-version=v4.03
Sequence

ATGGCAATTCACACTTGTTTCTCACTAATACCTTCTTCTTTCTCTTCTACCAAATTGCCA
TTCCCCAAAAACACTACTTTTCAATCTCCTATCCCAAAATTATCTAGACCCACTTTCATG
TTTGATCGGAAAGGTTCCTTTCAAAATGGCACCGCTGCCGTTCCTGCTGTAGGTGAGGAT
TTTCCGATTGATTATGCTGATTGGTTGCCAAAACGAGACCCAAACGATCGTAGAAGAGCT
GGAATTTTGCTCCATCCGACGTCGTTTCCTGGACCTTATGGTATTGGTGACCTTGGCCCT
CAGGCTTTTAAGTTCCTTGATTGGCTTCATCTTGCTGGTTGCTCCCTTTGGCAGGTTCTT
CCACTTGTACCGCCTGGAAAGAGAGGCAATGAAGATGGATCACCCTATTCAGGACAGGAT
GCAAATTGTGGAAACACACTTCTGATTTCTCTTGAAGAGCTTGTTGATGATGGTTTACTG
AAGAAGGAGGAGCTTCCGGAGCCACTACCTACAGATCGTGTCAATTACTCGACTATATCT
GAGATAAAAGATCCTTTAATAACCAAGGCAGCAAAGAGGCTTCTTTCCAGTGAAGGGGAA
CTGAAAGACCAGCTCGAGAACTTTCGCCGGGATCCAAATATTTCGAGTTGGCTGGAGGAT
GCTGCTTATTTTGCTGCCATAGACAACTCTGTAAACACTATTAGCTGGTATGATTGGCCT
GAACCATTGAAAAATCGCCATCTTGCAGCTCTAGAAGAAGTTTATCAAAGTGAAAAGGAT
TTTATTGACATATTCATTGCACAACAGTTCTTGTTCCAACGACAATGGAAAAAAGTTCGT
GACTATGCACGATCCAAAGGAATCAGTATAATGGGAGACATGCCAATATATGTTGGATAT
CACAGTGCTGATGTTTGGGCCAACAAGAAACAATTTTTGCTGAATAGGAAAGGTTTCCCT
CTTATAGTTAGTGGTGTTCCTCCAGACGCCTTTAGTGAAACTGGTCAACTATGGGGCAGC
CCTCTCTATGATTGGAAAGCCATGGAGAAGGATGGATTTTCATGGTGGGTATGCCGAATT
CAACGTGCAACGGATCTTTTTGATGAATTTAGGATAGATCACTTTAGAGGATTTGCTGGA
TTTTGGGCTGTTCCTTCTGAGGAAAAAATTGCAATTCTGGGACGGTGGAAGGTGGGACCT
GGAAAACCTTTGTTTGATGCTATCTTACAAGCTGTTGGGAAGATCAATATTATAGCAGAA
GACTTGGGAGTAATTACCGAGGACGTTGTTCAGCTAAGAAAGTCCATTGAGGCACCTGGA
ATGGCTGTACTCCAGTTTGCATTTGGCAGTGACGCTGAAAACCCTCATTTACCTCACAAT
CATGAGCAGAACCAAGTAGTGTATACTGGAACACATGACAATGATACGATCCGAGGTTGG
TGGGATACTTTGCCACAGGAAGAGAAATCCAATGTACTAAAGTATTTATCAAATATTGAG
GAAGAGGAAATATCATGGGGCTTGATCGAAGGTGCAGTTTCTTCTGTAGCCCGTATTGCA
ATTATACCGATGCAGGATGTTCTTGGGCTTGGGAGTGATTCCAGAATGAACATTCCAGCA
ACTCAGTTTGGAAACTGGAGTTGGAGGATACCTAGTTCAACTAGCTTTGACAACCTGGAT
GCAGAAGCAAAAAAGCTAAGAGATATACTTGCAACTTATGGGCGGTTGTGA