Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042714
CDS Infomation

pacid=37472683 polypeptide=PGSC0003DMP400028983 locus=PGSC0003DMG400016576 ID=PGSC0003DMT400042714.v4.03 annot-version=v4.03
Sequence

ATGGACCTTGCTACAAAGCTCCAAGTAATCGACCTTCGTTCCACTTTTCTCACTGGAAGA
GCTAATCTTCTATGCCCTGGTGGTGTGAAAACCACTGCAGTTACAGTTTTCAATAACCCC
AGAAGAAGAAAAGTTCTTAGAATTTCATCGAAATTGCAAGCTGTAGCTGTTGAAACTGCT
GAAACAGAGGTAAAAGAAGATATAGAGTCGTTGTTTTCGAGTAATTCTAGTAATGAATTT
GATTATTCCAGAAGGGGTAATAAGCAATCAGGTAATGGGGCTTCGAGTATTTCATCTGGG
GTTAGGCTAGAGAATGTTAGCAAGAGTTATAAAGGTGTTACGGTGCTGAAAGATGTGAGT
TGGGAGGTGAAAAAGGGTGAAAAGGTTGGTTTAGTAGGTGTAAATGGTGCAGGGAAAACG
ACCCAATTGAGGATTATATCTGGTTTGGAAGAACCAGATTCTGGAAATGTGATTAAGGCA
AAACCAAATATGAAGATTGCATTTTTAAGCCAAGAATTTGAGGTTGAGTCGACAAGAACT
GTGAAGGAAGAGTTTATGAGTGCATTTAAGGAGGAAATGGAAGTTGCAGAGAGACTTGAG
AAGGTTCAGAAGGCAATTGAGAAATCTGTTGATGATTTGGAGTTGATGGGGAGGTTGTTG
GATGAGTTTGATTTGCTGCAGAGGAGGGCACAAGCTGTGGATTTGGATGTGGTAGATGTT
AAGATTAACAAGATGATGCCCGAGTTAGGATTTGCTCCAGAGGATGCAGATAGGCTTGTG
GCATCATTTAGTGGTGGCTGGCAAATGAGGATGTCTCTGGGTAAGATCTTGCTGCAGGAC
CCAGATTTGTTACTACTGGATGAACCGACCAATCATCTTGACCTTGATACGATTGAGTGG
CTTGAGAGTTATCTTAATAAGCAAGAAGTTCCGATGGTCATTATATCTCATGACCGAGCT
TTCCTTGACCAGTTGTGTACAAAAATTGTGGAGACTGATATGGGTGTATCTAGGACATAT
GATGGAAATTACTCGGATTATATTATTTCAAGGGCTGAATGGATTGAAACACAGAATGCT
GCATGGGAAAAGCAACAGAAGGAAATTGAGCAAACTAGAGATTTGATAAGTAGGTTAAGT
GCTGGAGCAAACTCAGGTCGTGCATCTACAGCTGAAAAGAAGCTGGAGAAACTTCAGGAC
CAGGAACAAATTGATAAGCCATTCATAAGGAAACAAATGAAGATTAGGTTCCCCGAACGT
GAAAGAAGTGGGAGAACAGTTGTGAATGTTAAAAATCTGGAATTTGCTTTCGAGGATAAG
GTTCTTTTCAAGAATGCAAACTTGACAATTGAGAGAGGAGAGAAAATTGCCATTATTGGT
CCTAATGGGTGTGGAAAGAGCACCTTTCTTAAACTGATTATGGATTTACTGAAGCCAACA
CGAGGTGAAGTTGTGCTTGGGGAGCACAACGTCTTACCAAATTACTTTGAGCAGAATCAG
GCTGAGGCACTCGATTTGGAAAAAACTGTCCTTGAAACTGTAGCAGAAGCTGCCGAGGAT
TGGAGACTAGATGATATAAAAGGACTCCTTGGACGTTGTAATTTTAAAGCTGACATGCTT
GACAGGAAGGTTTCCTTTTTGAGTGGCGGTGAGAAGGCACGTCTGTCCTTCTGTAAGTTC
ATGGTGACCCCTTCAACTTTGCTAGTACTGGATGAGCCAACCAATCATTTGGACATACCA
ACGAAAGAGATGCTTGAGGAGGCAATTACGGAGTATCAAGGCACTGTGATAACTGTTTCT
CATGATCGGTACTTCATAAAACAAATTGTTAACAGAGTATTGGAAGTAAAAGACGGCACT
TTACATGATTATGAAGGAGATTATGATTATTATTTGGAGAAAAACCTTGAGGCCAGGGAA
AGAGAGCTTGAACGAGAGGCAGAGATCGAGGACAAGTCTCCAAAAGCTAAAGCCAAATCC
AAGATGTCAAAGGCGGAAAAGGAAGCTCGGAAGAAACAGAAAATGCAGGCATTCCAAGCA
GCAAAACAGAAGTCGAAGAAATCAAAGAACTCCAAGAGATGGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028983
PEP Infomation

pacid=37472683 transcript=PGSC0003DMT400042714 locus=PGSC0003DMG400016576 ID=PGSC0003DMT400042714.v4.03 annot-version=v4.03
Sequence

MDLATKLQVIDLRSTFLTGRANLLCPGGVKTTAVTVFNNPRRRKVLRISSKLQAVAVETA
ETEVKEDIESLFSSNSSNEFDYSRRGNKQSGNGASSISSGVRLENVSKSYKGVTVLKDVS
WEVKKGEKVGLVGVNGAGKTTQLRIISGLEEPDSGNVIKAKPNMKIAFLSQEFEVESTRT
VKEEFMSAFKEEMEVAERLEKVQKAIEKSVDDLELMGRLLDEFDLLQRRAQAVDLDVVDV
KINKMMPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEW
LESYLNKQEVPMVIISHDRAFLDQLCTKIVETDMGVSRTYDGNYSDYIISRAEWIETQNA
AWEKQQKEIEQTRDLISRLSAGANSGRASTAEKKLEKLQDQEQIDKPFIRKQMKIRFPER
ERSGRTVVNVKNLEFAFEDKVLFKNANLTIERGEKIAIIGPNGCGKSTFLKLIMDLLKPT
RGEVVLGEHNVLPNYFEQNQAEALDLEKTVLETVAEAAEDWRLDDIKGLLGRCNFKADML
DRKVSFLSGGEKARLSFCKFMVTPSTLLVLDEPTNHLDIPTKEMLEEAITEYQGTVITVS
HDRYFIKQIVNRVLEVKDGTLHDYEGDYDYYLEKNLEARERELEREAEIEDKSPKAKAKS
KMSKAEKEARKKQKMQAFQAAKQKSKKSKNSKRWN*

Transcript Sequence

Transcript ID

PGSC0003DMT400042714
Transcript Infomation

pacid=37472683 locus=PGSC0003DMG400016576 ID=PGSC0003DMT400042714.v4.03 annot-version=v4.03
Sequence

ATGGACCTTGCTACAAAGCTCCAAGTAATCGACCTTCGTTCCACTTTTCTCACTGGAAGA
GCTAATCTTCTATGCCCTGGTGGTGTGAAAACCACTGCAGTTACAGTTTTCAATAACCCC
AGAAGAAGAAAAGTTCTTAGAATTTCATCGAAATTGCAAGCTGTAGCTGTTGAAACTGCT
GAAACAGAGGTAAAAGAAGATATAGAGTCGTTGTTTTCGAGTAATTCTAGTAATGAATTT
GATTATTCCAGAAGGGGTAATAAGCAATCAGGTAATGGGGCTTCGAGTATTTCATCTGGG
GTTAGGCTAGAGAATGTTAGCAAGAGTTATAAAGGTGTTACGGTGCTGAAAGATGTGAGT
TGGGAGGTGAAAAAGGGTGAAAAGGTTGGTTTAGTAGGTGTAAATGGTGCAGGGAAAACG
ACCCAATTGAGGATTATATCTGGTTTGGAAGAACCAGATTCTGGAAATGTGATTAAGGCA
AAACCAAATATGAAGATTGCATTTTTAAGCCAAGAATTTGAGGTTGAGTCGACAAGAACT
GTGAAGGAAGAGTTTATGAGTGCATTTAAGGAGGAAATGGAAGTTGCAGAGAGACTTGAG
AAGGTTCAGAAGGCAATTGAGAAATCTGTTGATGATTTGGAGTTGATGGGGAGGTTGTTG
GATGAGTTTGATTTGCTGCAGAGGAGGGCACAAGCTGTGGATTTGGATGTGGTAGATGTT
AAGATTAACAAGATGATGCCCGAGTTAGGATTTGCTCCAGAGGATGCAGATAGGCTTGTG
GCATCATTTAGTGGTGGCTGGCAAATGAGGATGTCTCTGGGTAAGATCTTGCTGCAGGAC
CCAGATTTGTTACTACTGGATGAACCGACCAATCATCTTGACCTTGATACGATTGAGTGG
CTTGAGAGTTATCTTAATAAGCAAGAAGTTCCGATGGTCATTATATCTCATGACCGAGCT
TTCCTTGACCAGTTGTGTACAAAAATTGTGGAGACTGATATGGGTGTATCTAGGACATAT
GATGGAAATTACTCGGATTATATTATTTCAAGGGCTGAATGGATTGAAACACAGAATGCT
GCATGGGAAAAGCAACAGAAGGAAATTGAGCAAACTAGAGATTTGATAAGTAGGTTAAGT
GCTGGAGCAAACTCAGGTCGTGCATCTACAGCTGAAAAGAAGCTGGAGAAACTTCAGGAC
CAGGAACAAATTGATAAGCCATTCATAAGGAAACAAATGAAGATTAGGTTCCCCGAACGT
GAAAGAAGTGGGAGAACAGTTGTGAATGTTAAAAATCTGGAATTTGCTTTCGAGGATAAG
GTTCTTTTCAAGAATGCAAACTTGACAATTGAGAGAGGAGAGAAAATTGCCATTATTGGT
CCTAATGGGTGTGGAAAGAGCACCTTTCTTAAACTGATTATGGATTTACTGAAGCCAACA
CGAGGTGAAGTTGTGCTTGGGGAGCACAACGTCTTACCAAATTACTTTGAGCAGAATCAG
GCTGAGGCACTCGATTTGGAAAAAACTGTCCTTGAAACTGTAGCAGAAGCTGCCGAGGAT
TGGAGACTAGATGATATAAAAGGACTCCTTGGACGTTGTAATTTTAAAGCTGACATGCTT
GACAGGAAGGTTTCCTTTTTGAGTGGCGGTGAGAAGGCACGTCTGTCCTTCTGTAAGTTC
ATGGTGACCCCTTCAACTTTGCTAGTACTGGATGAGCCAACCAATCATTTGGACATACCA
ACGAAAGAGATGCTTGAGGAGGCAATTACGGAGTATCAAGGCACTGTGATAACTGTTTCT
CATGATCGGTACTTCATAAAACAAATTGTTAACAGAGTATTGGAAGTAAAAGACGGCACT
TTACATGATTATGAAGGAGATTATGATTATTATTTGGAGAAAAACCTTGAGGCCAGGGAA
AGAGAGCTTGAACGAGAGGCAGAGATCGAGGACAAGTCTCCAAAAGCTAAAGCCAAATCC
AAGATGTCAAAGGCGGAAAAGGAAGCTCGGAAGAAACAGAAAATGCAGGCATTCCAAGCA
GCAAAACAGAAGTCGAAGAAATCAAAGAACTCCAAGAGATGGAACTGA