Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042654
CDS Infomation

pacid=37452060 polypeptide=PGSC0003DMP400028936 locus=PGSC0003DMG400016543 ID=PGSC0003DMT400042654.v4.03 annot-version=v4.03
Sequence

ATGGTGGGTGCATCACTGGCAGGGTTGCAAGATCATCTCAAATTGGCTAGAGAATATGCT
GTTGAAGGCCTTTATGATACTTCCGTCATCTTCTTCGATGGCGCAATTGCTCAGATCAAT
AAACACGTAAACACACTTGATGATCCTTTGATTCGTTCAAAATGGATGAATGCAAAGAAA
TCAATTTCCGAAGAAACTGAGGTAGTGAAACAATTGGATGCCGAGAAAAGGGCTTTTAAG
GAGATTCCTATGGGTAGGCGTCCTAATTCACCTCCCATTTCAACCAAGTCGTCTTTTGTC
TTTCAACCGCTTGATGAGTACCCCACCTCATCCGGTGCTCCGATGGATGACCCTGATGTT
TGGAGACCACCAAGTCGGGACACAACAAGAAGACCTGGAAGAGCCGGTCAGGGGGGTATG
AGAAAGTCCCCACAAGATGGAGCGTGGGCTCGTGCATCTACTACAAGGACTGGAACCACA
AGCCGTGGGGGAAGGACCAGTGGCTCTACTAAGGCTGCTACTGGGATTCGATCTTCAACT
ACTGGGAAAAAAGCACCTGGAAAATCTGCAAAATCCGATTCTACGGATGGTGAACCTGAA
GAGGGGAAGAGTAAAAAAGGTCAGTACGAGGGGCCTGATGCAGACCTGGCTGCTATGCTT
GAGAGAGATGTCTTGGATAATAGCCCTGGTGTGAGATGGGACGATGTTGCTGGGTTAAGT
GAAGCCAAAAGACTTTTGGAGGAAGCAGTTGTTCTTCCATTGTGGATGCCAGAATATTTC
CAGGGAATCAGGAGACCATGGAAGGGTGTTCTTATGTTTGGGCCTCCTGGAACGGGGAAG
ACACTTTTGGCTAAGGCTGTTGCTACCGAGTGTGGGACGACATTTTTCAATGTTTCTTCT
GCCACCTTGGCTTCAAAATGGCGTGGGGAGAGTGAACGCATGGTGCGGTGCTTGTTTGAT
CTTGCTCGCTCTTATGCTCCCAGTACAATTTTCATTGATGAGATTGATTCTCTTTGTAAT
TCCCGAGGGGGTTCAGGAGAGCATGAATCATCCCGAAGGGTGAAGTCTGAACTTCTTGTT
CAGGTAGATGGTGTAAGCAACTCTGCCACTAATGAAGACGGCACTCGGAAGATTGTTATG
GTTTTAGCAGCTACAAACTTTCCATGGGACATAGATGAGGCATTAAGGAGACGTTTGGAA
AAACGTATATATATTCCCCTACCTAACTTTGAGAGCCGGAAGGAGCTTATAAAGATCAAT
TTAAAAAGTATTGAGGTAGCTGCAGATGTGGACATTGATGAAGTAGCTCGCAAAACAGAG
GGATATAGTGGAGACGACCTCACAAATGTTTGCCGAGATGCTTCTATGAATGGCATGAGG
CGAAAGATAGCTGGGAAGACACGTGAGGAGATTAAGAACATGGCCAAGGATGACATTGCT
AAGGATCCTGTTGCAATGTGTGACTTTGTAGAAGCTATTTCCAAAGTTCAACCTAGTGTC
TCAGCAGCTGACATTGAAAAACATGAGAAATGGTTTGCAGAATTTGGATCAGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028936
PEP Infomation

pacid=37452060 transcript=PGSC0003DMT400042654 locus=PGSC0003DMG400016543 ID=PGSC0003DMT400042654.v4.03 annot-version=v4.03
Sequence

MVGASLAGLQDHLKLAREYAVEGLYDTSVIFFDGAIAQINKHVNTLDDPLIRSKWMNAKK
SISEETEVVKQLDAEKRAFKEIPMGRRPNSPPISTKSSFVFQPLDEYPTSSGAPMDDPDV
WRPPSRDTTRRPGRAGQGGMRKSPQDGAWARASTTRTGTTSRGGRTSGSTKAATGIRSST
TGKKAPGKSAKSDSTDGEPEEGKSKKGQYEGPDADLAAMLERDVLDNSPGVRWDDVAGLS
EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSS
ATLASKWRGESERMVRCLFDLARSYAPSTIFIDEIDSLCNSRGGSGEHESSRRVKSELLV
QVDGVSNSATNEDGTRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIKIN
LKSIEVAADVDIDEVARKTEGYSGDDLTNVCRDASMNGMRRKIAGKTREEIKNMAKDDIA
KDPVAMCDFVEAISKVQPSVSAADIEKHEKWFAEFGSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400042654
Transcript Infomation

pacid=37452060 locus=PGSC0003DMG400016543 ID=PGSC0003DMT400042654.v4.03 annot-version=v4.03
Sequence

ATGGTGGGTGCATCACTGGCAGGGTTGCAAGATCATCTCAAATTGGCTAGAGAATATGCT
GTTGAAGGCCTTTATGATACTTCCGTCATCTTCTTCGATGGCGCAATTGCTCAGATCAAT
AAACACGTAAACACACTTGATGATCCTTTGATTCGTTCAAAATGGATGAATGCAAAGAAA
TCAATTTCCGAAGAAACTGAGGTAGTGAAACAATTGGATGCCGAGAAAAGGGCTTTTAAG
GAGATTCCTATGGGTAGGCGTCCTAATTCACCTCCCATTTCAACCAAGTCGTCTTTTGTC
TTTCAACCGCTTGATGAGTACCCCACCTCATCCGGTGCTCCGATGGATGACCCTGATGTT
TGGAGACCACCAAGTCGGGACACAACAAGAAGACCTGGAAGAGCCGGTCAGGGGGGTATG
AGAAAGTCCCCACAAGATGGAGCGTGGGCTCGTGCATCTACTACAAGGACTGGAACCACA
AGCCGTGGGGGAAGGACCAGTGGCTCTACTAAGGCTGCTACTGGGATTCGATCTTCAACT
ACTGGGAAAAAAGCACCTGGAAAATCTGCAAAATCCGATTCTACGGATGGTGAACCTGAA
GAGGGGAAGAGTAAAAAAGGTCAGTACGAGGGGCCTGATGCAGACCTGGCTGCTATGCTT
GAGAGAGATGTCTTGGATAATAGCCCTGGTGTGAGATGGGACGATGTTGCTGGGTTAAGT
GAAGCCAAAAGACTTTTGGAGGAAGCAGTTGTTCTTCCATTGTGGATGCCAGAATATTTC
CAGGGAATCAGGAGACCATGGAAGGGTGTTCTTATGTTTGGGCCTCCTGGAACGGGGAAG
ACACTTTTGGCTAAGGCTGTTGCTACCGAGTGTGGGACGACATTTTTCAATGTTTCTTCT
GCCACCTTGGCTTCAAAATGGCGTGGGGAGAGTGAACGCATGGTGCGGTGCTTGTTTGAT
CTTGCTCGCTCTTATGCTCCCAGTACAATTTTCATTGATGAGATTGATTCTCTTTGTAAT
TCCCGAGGGGGTTCAGGAGAGCATGAATCATCCCGAAGGGTGAAGTCTGAACTTCTTGTT
CAGGTAGATGGTGTAAGCAACTCTGCCACTAATGAAGACGGCACTCGGAAGATTGTTATG
GTTTTAGCAGCTACAAACTTTCCATGGGACATAGATGAGGCATTAAGGAGACGTTTGGAA
AAACGTATATATATTCCCCTACCTAACTTTGAGAGCCGGAAGGAGCTTATAAAGATCAAT
TTAAAAAGTATTGAGGTAGCTGCAGATGTGGACATTGATGAAGTAGCTCGCAAAACAGAG
GGATATAGTGGAGACGACCTCACAAATGTTTGCCGAGATGCTTCTATGAATGGCATGAGG
CGAAAGATAGCTGGGAAGACACGTGAGGAGATTAAGAACATGGCCAAGGATGACATTGCT
AAGGATCCTGTTGCAATGTGTGACTTTGTAGAAGCTATTTCCAAAGTTCAACCTAGTGTC
TCAGCAGCTGACATTGAAAAACATGAGAAATGGTTTGCAGAATTTGGATCAGCTTAG