Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042642
CDS Infomation

pacid=37452737 polypeptide=PGSC0003DMP400028926 locus=PGSC0003DMG400016535 ID=PGSC0003DMT400042642.v4.03 annot-version=v4.03
Sequence

ATGGATTTCTGGCCAGAGTTTCTAGCAAGTAGTTGGGGAAAAGAATTTGTGGCTGGCGGA
TTCGGAGGAATTGCAGGTATCGTATCTGGTTATCCTCTTGATACCATTAGAGTCCGTCAA
CAGAGTTGTACGCCTGGCTCTGCTTTCAACATCCTCCGCCATGTTGCCGCCACTGAAGGT
CCCCTGGCTCTCTACAGAGGCATGGCTGCTCCTCTCGCTTCCGTCACATTTCAGAATGCT
ATGGTATTTCAGATTTATGCAGTGCTATCGCGAGCATTTGACAGGAATGCTCCAGCCAGT
GATCCACCCTCCTACAAAGGAGTGGCCTTAGGTGGATTTGGAACAGGAGCATTACAAAGC
CTAATGCTCACTCCTGTCGAACTTGTGAAAATTCGACTGCAGTTGCAACAGAGAAATATC
CTGGATAACAAAAAACAAAAAACAAGTTGTAAGGGTCCAACTGATGTGGCAAGAAACATA
TTCAGACAAGAAGGATGGAGGGGAATTTATCGCGGATTAACAATTACAGTCCTCAGAGAT
GCACCAGCTCACGGCCTATATTTCTGGACATACGAGTATGTTAGAGAGCAACTTCATCCA
GGATGTCGTAAGAATGGTCAAGAGAGCTTTAGAACAATGCTTATAGCAGGTGGTCTTGCA
GGAGTAGCTAGCTGGATATGCTGCTATCCGCTGGATGTTATCAAAACTCGATTCCAAGCT
CAGTCACAATCTACACCATTGAGATATACTGGCATTGTTGATTGCTTCAGGAGAAGTGTG
AAACACGAGGGATACAATGTGCTCTGGCGAGGTTTGGGAACTGCAGTTGCCAGAGCATTT
GTAGTGAATGGGGCTATATTCACTGCCTATGAAACTGCCTTAAGGTGCCTTTTCATCAAC
AACAACAATAAAGTTCACGCGAATATTCAAACTGAAAATGCATTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028926
PEP Infomation

pacid=37452737 transcript=PGSC0003DMT400042642 locus=PGSC0003DMG400016535 ID=PGSC0003DMT400042642.v4.03 annot-version=v4.03
Sequence

MDFWPEFLASSWGKEFVAGGFGGIAGIVSGYPLDTIRVRQQSCTPGSAFNILRHVAATEG
PLALYRGMAAPLASVTFQNAMVFQIYAVLSRAFDRNAPASDPPSYKGVALGGFGTGALQS
LMLTPVELVKIRLQLQQRNILDNKKQKTSCKGPTDVARNIFRQEGWRGIYRGLTITVLRD
APAHGLYFWTYEYVREQLHPGCRKNGQESFRTMLIAGGLAGVASWICCYPLDVIKTRFQA
QSQSTPLRYTGIVDCFRRSVKHEGYNVLWRGLGTAVARAFVVNGAIFTAYETALRCLFIN
NNNKVHANIQTENAF*

Transcript Sequence

Transcript ID

PGSC0003DMT400042642
Transcript Infomation

pacid=37452737 locus=PGSC0003DMG400016535 ID=PGSC0003DMT400042642.v4.03 annot-version=v4.03
Sequence

ATGGATTTCTGGCCAGAGTTTCTAGCAAGTAGTTGGGGAAAAGAATTTGTGGCTGGCGGA
TTCGGAGGAATTGCAGGTATCGTATCTGGTTATCCTCTTGATACCATTAGAGTCCGTCAA
CAGAGTTGTACGCCTGGCTCTGCTTTCAACATCCTCCGCCATGTTGCCGCCACTGAAGGT
CCCCTGGCTCTCTACAGAGGCATGGCTGCTCCTCTCGCTTCCGTCACATTTCAGAATGCT
ATGGTATTTCAGATTTATGCAGTGCTATCGCGAGCATTTGACAGGAATGCTCCAGCCAGT
GATCCACCCTCCTACAAAGGAGTGGCCTTAGGTGGATTTGGAACAGGAGCATTACAAAGC
CTAATGCTCACTCCTGTCGAACTTGTGAAAATTCGACTGCAGTTGCAACAGAGAAATATC
CTGGATAACAAAAAACAAAAAACAAGTTGTAAGGGTCCAACTGATGTGGCAAGAAACATA
TTCAGACAAGAAGGATGGAGGGGAATTTATCGCGGATTAACAATTACAGTCCTCAGAGAT
GCACCAGCTCACGGCCTATATTTCTGGACATACGAGTATGTTAGAGAGCAACTTCATCCA
GGATGTCGTAAGAATGGTCAAGAGAGCTTTAGAACAATGCTTATAGCAGGTGGTCTTGCA
GGAGTAGCTAGCTGGATATGCTGCTATCCGCTGGATGTTATCAAAACTCGATTCCAAGCT
CAGTCACAATCTACACCATTGAGATATACTGGCATTGTTGATTGCTTCAGGAGAAGTGTG
AAACACGAGGGATACAATGTGCTCTGGCGAGGTTTGGGAACTGCAGTTGCCAGAGCATTT
GTAGTGAATGGGGCTATATTCACTGCCTATGAAACTGCCTTAAGGTGCCTTTTCATCAAC
AACAACAATAAAGTTCACGCGAATATTCAAACTGAAAATGCATTCTAA