Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042632
CDS Infomation

pacid=37454347 polypeptide=PGSC0003DMP400028922 locus=PGSC0003DMG400016533 ID=PGSC0003DMT400042632.v4.03 annot-version=v4.03
Sequence

ATGATTCTTGAAACGAACAATAATTCAATGGCTGGATTCAAGTCACGTTTGGCTAATGAT
TCAACGGTCACTAGCTCTCGTTCAGATATGGAGTTGATGAAGGAAAAGTTTTCAAAGTTG
CTCCTTGGTGAGGATATGTCTGGTGGAGGAAAGGGTGTCTCGTCTGCGCTGGCTTTGTCA
AATGCAATCACAAATCTAGCAGCTTCTGTTTTCGGAGAGATGAAAAGATTAGAGCCAATG
CCAGCTGAGAGAAAAGCAAAATGGAGAAAAGAAATTGGTTGGCTTTTATCTGTCACAGAT
CACATTGTTGAATTTGTTCCTTGTAGACAAGTATCAAAAGCTGGAACAAACATGGAGGTT
ATGGTAACAAAGCAGCGATCTGATCTTCAAATGAACATTCCAGCTCTACGGAAGCTAGAT
GCAATGCTTATTGATTGCTTAGATGGCCTTAACGATCAAAGTGAGTTCTCGTATGTATCA
AAAGATGATGAATCACAGGAAGAAACAAACAGCAGGAAAGATGACAAATGGTGGATACCT
ACTCCTAAGGTTCATCCTAGCGGCTTGTCTGATCCAATGAGGATTTGGCTGCAATTTCAG
AAGGATTCAGTAATCCAAGTTCATAAAGCATCCATGGCGATAAATGCTCAAGTCTTGTCA
GAAATGGAGATCCCAGAAAGTTATATAGAATCCCTACCTAAGAATGGGAGAGCAAGCCTA
GGAGATTCAATCTACAAAAGCATCACCGATGAATACTTTGATCCAGATTACTTCTTCACA
ACTATGGACATGTCTTCAGAACATAAAATTTTAGACCTCAAGGACAGGATTGAGGCTTCT
GTAGTTATTTGGAAAAGAAAGATGAATGCTAAAGATGGGAAATCATCCTGGGGTTCAACT
ATTAGCTTTGAGAAGAGAGAAATGTTTGAAGAAAGAGCAGAAGTCATCTTGTTAATTCTT
AAGCAGCGGTTCCCTGGAATTCCTCAGTCAAAACTAGACATTAGTAAAATCCAATACAAC
AAAGATGTGGGACAAGCTATATTAGAAAGCTATTCAAGAATAATAGAAAGCAGGGCATTC
ACAATCATGTCACGAATTGAAGATGTTCTCCAAGCAGATGCTATTGCCCAAAATCCTTCC
AATGGAGAAGTAAAGAGACCATTATCAGATAAAGAAGTAGGAAAGCTTAACTCTGCTGAG
AATGGAGCTTCATTGACACTTTTAGACTTCATCGGTTGGACACCTGATCAAGAAGACAAC
AACACAAAGAAAGATTTGAAGGAGGATCCAACTTATAAAGATATTAACGCGAAGATTAAA
TGCAACCCTTCTAGCATAGTCACCAACAAGAGGTTTTCTTACCTAGAGAACTTAGGTATG
TGTAGAAGTCCAACTGCACGTCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028922
PEP Infomation

pacid=37454347 transcript=PGSC0003DMT400042632 locus=PGSC0003DMG400016533 ID=PGSC0003DMT400042632.v4.03 annot-version=v4.03
Sequence

MILETNNNSMAGFKSRLANDSTVTSSRSDMELMKEKFSKLLLGEDMSGGGKGVSSALALS
NAITNLAASVFGEMKRLEPMPAERKAKWRKEIGWLLSVTDHIVEFVPCRQVSKAGTNMEV
MVTKQRSDLQMNIPALRKLDAMLIDCLDGLNDQSEFSYVSKDDESQEETNSRKDDKWWIP
TPKVHPSGLSDPMRIWLQFQKDSVIQVHKASMAINAQVLSEMEIPESYIESLPKNGRASL
GDSIYKSITDEYFDPDYFFTTMDMSSEHKILDLKDRIEASVVIWKRKMNAKDGKSSWGST
ISFEKREMFEERAEVILLILKQRFPGIPQSKLDISKIQYNKDVGQAILESYSRIIESRAF
TIMSRIEDVLQADAIAQNPSNGEVKRPLSDKEVGKLNSAENGASLTLLDFIGWTPDQEDN
NTKKDLKEDPTYKDINAKIKCNPSSIVTNKRFSYLENLGMCRSPTARH*

Transcript Sequence

Transcript ID

PGSC0003DMT400042632
Transcript Infomation

pacid=37454347 locus=PGSC0003DMG400016533 ID=PGSC0003DMT400042632.v4.03 annot-version=v4.03
Sequence

ATGATTCTTGAAACGAACAATAATTCAATGGCTGGATTCAAGTCACGTTTGGCTAATGAT
TCAACGGTCACTAGCTCTCGTTCAGATATGGAGTTGATGAAGGAAAAGTTTTCAAAGTTG
CTCCTTGGTGAGGATATGTCTGGTGGAGGAAAGGGTGTCTCGTCTGCGCTGGCTTTGTCA
AATGCAATCACAAATCTAGCAGCTTCTGTTTTCGGAGAGATGAAAAGATTAGAGCCAATG
CCAGCTGAGAGAAAAGCAAAATGGAGAAAAGAAATTGGTTGGCTTTTATCTGTCACAGAT
CACATTGTTGAATTTGTTCCTTGTAGACAAGTATCAAAAGCTGGAACAAACATGGAGGTT
ATGGTAACAAAGCAGCGATCTGATCTTCAAATGAACATTCCAGCTCTACGGAAGCTAGAT
GCAATGCTTATTGATTGCTTAGATGGCCTTAACGATCAAAGTGAGTTCTCGTATGTATCA
AAAGATGATGAATCACAGGAAGAAACAAACAGCAGGAAAGATGACAAATGGTGGATACCT
ACTCCTAAGGTTCATCCTAGCGGCTTGTCTGATCCAATGAGGATTTGGCTGCAATTTCAG
AAGGATTCAGTAATCCAAGTTCATAAAGCATCCATGGCGATAAATGCTCAAGTCTTGTCA
GAAATGGAGATCCCAGAAAGTTATATAGAATCCCTACCTAAGAATGGGAGAGCAAGCCTA
GGAGATTCAATCTACAAAAGCATCACCGATGAATACTTTGATCCAGATTACTTCTTCACA
ACTATGGACATGTCTTCAGAACATAAAATTTTAGACCTCAAGGACAGGATTGAGGCTTCT
GTAGTTATTTGGAAAAGAAAGATGAATGCTAAAGATGGGAAATCATCCTGGGGTTCAACT
ATTAGCTTTGAGAAGAGAGAAATGTTTGAAGAAAGAGCAGAAGTCATCTTGTTAATTCTT
AAGCAGCGGTTCCCTGGAATTCCTCAGTCAAAACTAGACATTAGTAAAATCCAATACAAC
AAAGATGTGGGACAAGCTATATTAGAAAGCTATTCAAGAATAATAGAAAGCAGGGCATTC
ACAATCATGTCACGAATTGAAGATGTTCTCCAAGCAGATGCTATTGCCCAAAATCCTTCC
AATGGAGAAGTAAAGAGACCATTATCAGATAAAGAAGTAGGAAAGCTTAACTCTGCTGAG
AATGGAGCTTCATTGACACTTTTAGACTTCATCGGTTGGACACCTGATCAAGAAGACAAC
AACACAAAGAAAGATTTGAAGGAGGATCCAACTTATAAAGATATTAACGCGAAGATTAAA
TGCAACCCTTCTAGCATAGTCACCAACAAGAGGTTTTCTTACCTAGAGAACTTAGGTATG
TGTAGAAGTCCAACTGCACGTCACTAA