Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042598
CDS Infomation

pacid=37452170 polypeptide=PGSC0003DMP400028894 locus=PGSC0003DMG400016521 ID=PGSC0003DMT400042598.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGGCGACGGTGGGTGCCGTGGTGGTAGGTACAGCGGCGGCGGTAGCTGTGGCG
GCGCTCATCATGCGCCACCGCATGGGTAAATCGAGCAAATGGGCACGTGCCAGGGCAATT
CTGAAGGAATTCGAGGAGAAATGTGCCACCCCAGATGGCAAACTGAAGCAAGTGGCTGAT
GCCATGACGGTGGAGATGCACGCCGGACTCGCCTCTGAAGGCGGCAGCAAGCTCAAGATG
CTTATTAGCTATGTCGATAATCTCCCTACTGGCGATGAAGGAGGAGTCTTTTATGCATTG
GATCTTGGTGGAACAAATTTTCGAGTATTGCGGGTGCAATTGGGGGGAAAAGATGGTGGC
ATTATCCATCAAGAATTTGCGGAGGCATCAATTCCTCCAAATTTGATGGTTGGAACTTCA
GAAGCACTTTTTGACTATATTGCGGCAGAACTTGCAAAATTCGTAGCTGAAGAAGGAGAA
GAGTTTCATCCACCTCCTGGTAGGCAGAGAGAATTAGGCTTCACCTTCTCGTTCCCAATA
ATGCAAACTTCAATCAATTCTGGAACTCTTATCAGGTGGACGAAAGGTTTCTCCATTGAT
GACACGGTTGGCAAAGATGTTGTTGCAGAACTGACAAAAGCAATGCAAAAACGAGAAATT
GATATGAGGGTCTCAGCGCTTGTGAATGATACTGTTGGAACATTGGCTGGTGGTAGATTC
ACCAATAAGGATGTATCCATTGCTGTGATATTAGGTACTGGGACCAATGCAGCATATGTG
GAACGGGCTCAGGCAATTCCCAAATGGCACGGTCCTCTGCCTAAATCTGGAGAAATGGTG
ATCAATATGGAATGGGGTAACTTTAGGTCCTCCCACCTTCCCTTGACAGAGTACGATCAT
GCTATGGATACCGATAGTTTAAATCCTGGTGAACAGATATTTGAGAAGATATGTTCTGGC
ATGTACTTGGGAGAAATTTTACGCAGAGTTCTACTTAGAATGGCTGAAGAAGCTGGCATT
TTTGGCGAGGAAGTTCCTCCAAAACTCAAGAATTCATTCATATTGAGGACACCTGAAATG
TCTGCCATGCATCATGACACATCCTCTGATTTGAGAGTGGTTGGCGACAAGTTGAAGGAT
ATCTTAGAGATATCCAATACCTCCTTGAAGACAAGGAGATTAGTTGTTGAGCTGTGTAAT
ATTGTTGCAACACGTGGCGCCAGACTTGCGGCAGCTGGGATCTTGGGCATTATCAAAAAG
ATGGGAAAGGATACACCCAGGGAAAGTGGTCCAGAAAAGATTGTCGTAGCCATGGATGGC
GGATTGTATGAACATTATACAGAATACAGTAAGTGCTTGGAGAACACTTTGGTTGAATTG
CTTGGAAAGGAAATGGCCACAAGTATTGTTTTCAAGCACGCGAATGATGGTTCTGGCATT
GGCGCGGCACTCCTTGCGGCCTCTAACTCCGTGTATGTTGAAGACAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028894
PEP Infomation

pacid=37452170 transcript=PGSC0003DMT400042598 locus=PGSC0003DMG400016521 ID=PGSC0003DMT400042598.v4.03 annot-version=v4.03
Sequence

MKKATVGAVVVGTAAAVAVAALIMRHRMGKSSKWARARAILKEFEEKCATPDGKLKQVAD
AMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEGGVFYALDLGGTNFRVLRVQLGGKDGG
IIHQEFAEASIPPNLMVGTSEALFDYIAAELAKFVAEEGEEFHPPPGRQRELGFTFSFPI
MQTSINSGTLIRWTKGFSIDDTVGKDVVAELTKAMQKREIDMRVSALVNDTVGTLAGGRF
TNKDVSIAVILGTGTNAAYVERAQAIPKWHGPLPKSGEMVINMEWGNFRSSHLPLTEYDH
AMDTDSLNPGEQIFEKICSGMYLGEILRRVLLRMAEEAGIFGEEVPPKLKNSFILRTPEM
SAMHHDTSSDLRVVGDKLKDILEISNTSLKTRRLVVELCNIVATRGARLAAAGILGIIKK
MGKDTPRESGPEKIVVAMDGGLYEHYTEYSKCLENTLVELLGKEMATSIVFKHANDGSGI
GAALLAASNSVYVEDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400042598
Transcript Infomation

pacid=37452170 locus=PGSC0003DMG400016521 ID=PGSC0003DMT400042598.v4.03 annot-version=v4.03
Sequence

ATGAAGAAGGCGACGGTGGGTGCCGTGGTGGTAGGTACAGCGGCGGCGGTAGCTGTGGCG
GCGCTCATCATGCGCCACCGCATGGGTAAATCGAGCAAATGGGCACGTGCCAGGGCAATT
CTGAAGGAATTCGAGGAGAAATGTGCCACCCCAGATGGCAAACTGAAGCAAGTGGCTGAT
GCCATGACGGTGGAGATGCACGCCGGACTCGCCTCTGAAGGCGGCAGCAAGCTCAAGATG
CTTATTAGCTATGTCGATAATCTCCCTACTGGCGATGAAGGAGGAGTCTTTTATGCATTG
GATCTTGGTGGAACAAATTTTCGAGTATTGCGGGTGCAATTGGGGGGAAAAGATGGTGGC
ATTATCCATCAAGAATTTGCGGAGGCATCAATTCCTCCAAATTTGATGGTTGGAACTTCA
GAAGCACTTTTTGACTATATTGCGGCAGAACTTGCAAAATTCGTAGCTGAAGAAGGAGAA
GAGTTTCATCCACCTCCTGGTAGGCAGAGAGAATTAGGCTTCACCTTCTCGTTCCCAATA
ATGCAAACTTCAATCAATTCTGGAACTCTTATCAGGTGGACGAAAGGTTTCTCCATTGAT
GACACGGTTGGCAAAGATGTTGTTGCAGAACTGACAAAAGCAATGCAAAAACGAGAAATT
GATATGAGGGTCTCAGCGCTTGTGAATGATACTGTTGGAACATTGGCTGGTGGTAGATTC
ACCAATAAGGATGTATCCATTGCTGTGATATTAGGTACTGGGACCAATGCAGCATATGTG
GAACGGGCTCAGGCAATTCCCAAATGGCACGGTCCTCTGCCTAAATCTGGAGAAATGGTG
ATCAATATGGAATGGGGTAACTTTAGGTCCTCCCACCTTCCCTTGACAGAGTACGATCAT
GCTATGGATACCGATAGTTTAAATCCTGGTGAACAGATATTTGAGAAGATATGTTCTGGC
ATGTACTTGGGAGAAATTTTACGCAGAGTTCTACTTAGAATGGCTGAAGAAGCTGGCATT
TTTGGCGAGGAAGTTCCTCCAAAACTCAAGAATTCATTCATATTGAGGACACCTGAAATG
TCTGCCATGCATCATGACACATCCTCTGATTTGAGAGTGGTTGGCGACAAGTTGAAGGAT
ATCTTAGAGATATCCAATACCTCCTTGAAGACAAGGAGATTAGTTGTTGAGCTGTGTAAT
ATTGTTGCAACACGTGGCGCCAGACTTGCGGCAGCTGGGATCTTGGGCATTATCAAAAAG
ATGGGAAAGGATACACCCAGGGAAAGTGGTCCAGAAAAGATTGTCGTAGCCATGGATGGC
GGATTGTATGAACATTATACAGAATACAGTAAGTGCTTGGAGAACACTTTGGTTGAATTG
CTTGGAAAGGAAATGGCCACAAGTATTGTTTTCAAGCACGCGAATGATGGTTCTGGCATT
GGCGCGGCACTCCTTGCGGCCTCTAACTCCGTGTATGTTGAAGACAAGTGA