Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042594
CDS Infomation

pacid=37450849 polypeptide=PGSC0003DMP400028892 locus=PGSC0003DMG400016519 ID=PGSC0003DMT400042594.v4.03 annot-version=v4.03
Sequence

ATGGTGAGAGAAAAGAGGGATATAAGACCTGTAATCTTGAAATTTGGTGTTGCTTTAGCT
ATATCACTTGGTGGAATTCTCTTTACTTTTTTCAGAACTAAAAGAATCAAACCCTCTAAT
TCCTCTTCTTCATCCAATTCAGGTGAGCGGCAAAATGATGATCAGACAAACCCTGCCTCG
GGGAATTCAGTTTCAGAGTTTCCATGGAAATATGAGGATGTTTCCATACCAAAAATCATT
ATTGGGAGTTCTATACGAAACCCATCTACAAATTGTAGGTCTGGTGGAGACAAAGATGGG
CTTCTTCTGCCGGAGATCAATGAACTTGTAAAGGAATTCGGTTCGCCTCCAAAGGCTATA
TTTTCACCATGTGAGGATGTTGAAACACCGCTGCAGGGCACAGATTCACCCAAGGAATAC
AAGATTGTCGGAAGGGAGGACCATGAGCAAGAGATTAAGAACCTGAAGAATATTGTTAAA
ACTCTTAAAGAAAGGGAGAGGACTCGTGAGATCCAACTGCTCGAGTATTATGGCTGCAAG
GAGCAAGAAAAGGCCATCATGGAGCTTCAAAATCGCGTCAAGATACACAATTTGGAGGAC
AGGCATTTGGGTCTAAAGATCGAGTCTTTGAAAGCAGAGATTATGAAATTAGAGGCTCAA
GTGGCTGATTCTGCAAAGGTTGTCCCAGACCTTGAAGCTGCGAATTTGAAAATAAAGCAG
CTGAAAAAGAAGCTCAGGTTGGAAGCTGATCATAATAAGGAACAGATTTTATCCCTTAAT
GAAGGAGTTTCGAAGCTGCAGAACGAGGAGAAGAATCCTGTTCAAGTTGAATCGGATGTT
CAGTTGGAGCTCCAAAAGCTGAAGGACTTGGAGATCGAGGCTGATGAGTTGAGGAAATCT
AACCAAAGCTTAAGAGCGGAAAACTCGACAGTAGCTGATAAACTGGACTATCTTCAGCTC
TTTGCCATTTCTGCTCTGGAAGAGAATGTATTAGCAGAAGCACTGAAAGAAGAAAGTCTA
CAGCTGAGAAAGCAAAATGAAGAATTAGTAAAGAAAGTTGATCACATTCAAGAAGGTCGC
TACAGTGATGATGACGAAGTAGCCTATCTTAAATGGATAAATGCTTGCCTGCGATATGAG
CTGAGGAACTATCAGCCTGCCCTAGGCGAAACAACTGCAAGGGATCTCAGTAAAACGTTA
AGCCCCAACTCTAGGAATAAAGCCAAGCAACTAGTTGTTGAATATGCAGCTAAAGAAGAC
CAAGGGGACGGGGGAATCCATGTTTTGGATCTTGATTCTGACCAGTTATCCTCCCAAGAA
CCACATCTTATGAATTCGGGTGAGTTTGATGGTACTTCTATTGCTAATTCTTCAGCCCAT
AAGACTGACACTTCAAACAAAAGCAAAATCTTTCGTAAGCTTATGAGACTAATACGGGGA
AAGGACCATCATCATAATCATTCAGAAATGGTTCACAGCACTGAAGAGAATGCAGCAAGA
TGCTCTTATTGTTCTTCTGGGTACTGTTCAGATATGTCTGTCGTAGATACCGGAGCTATT
AGGCCCCAGAGCAGATCAAGAACACCATCTCCAGGTTCATCCAAAAAATTTATAGATTTC
CATTCATTTGATCAAGGCGCTACAACCAATAAAGGAGAAAGCAGAAACTATCCGACACGT
ACAAGGAGATACAGTGATGTGGGCTCTTTAGATTATATGTCAAAACGTCTCGCTGAATCA
CTTCAAGAAAAAGGAAATAACCATGACCAAGAAAATGTTCATAAATCTGAGTTGGCGAAA
TATGCAGAAGTTTTGAAAGGATCTCGCTCTAAAGAACCAGTTCGCAAGAGATCAGCATCA
GTTAGTTTCTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028892
PEP Infomation

pacid=37450849 transcript=PGSC0003DMT400042594 locus=PGSC0003DMG400016519 ID=PGSC0003DMT400042594.v4.03 annot-version=v4.03
Sequence

MVREKRDIRPVILKFGVALAISLGGILFTFFRTKRIKPSNSSSSSNSGERQNDDQTNPAS
GNSVSEFPWKYEDVSIPKIIIGSSIRNPSTNCRSGGDKDGLLLPEINELVKEFGSPPKAI
FSPCEDVETPLQGTDSPKEYKIVGREDHEQEIKNLKNIVKTLKERERTREIQLLEYYGCK
EQEKAIMELQNRVKIHNLEDRHLGLKIESLKAEIMKLEAQVADSAKVVPDLEAANLKIKQ
LKKKLRLEADHNKEQILSLNEGVSKLQNEEKNPVQVESDVQLELQKLKDLEIEADELRKS
NQSLRAENSTVADKLDYLQLFAISALEENVLAEALKEESLQLRKQNEELVKKVDHIQEGR
YSDDDEVAYLKWINACLRYELRNYQPALGETTARDLSKTLSPNSRNKAKQLVVEYAAKED
QGDGGIHVLDLDSDQLSSQEPHLMNSGEFDGTSIANSSAHKTDTSNKSKIFRKLMRLIRG
KDHHHNHSEMVHSTEENAARCSYCSSGYCSDMSVVDTGAIRPQSRSRTPSPGSSKKFIDF
HSFDQGATTNKGESRNYPTRTRRYSDVGSLDYMSKRLAESLQEKGNNHDQENVHKSELAK
YAEVLKGSRSKEPVRKRSASVSFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400042594
Transcript Infomation

pacid=37450849 locus=PGSC0003DMG400016519 ID=PGSC0003DMT400042594.v4.03 annot-version=v4.03
Sequence

ATGGTGAGAGAAAAGAGGGATATAAGACCTGTAATCTTGAAATTTGGTGTTGCTTTAGCT
ATATCACTTGGTGGAATTCTCTTTACTTTTTTCAGAACTAAAAGAATCAAACCCTCTAAT
TCCTCTTCTTCATCCAATTCAGGTGAGCGGCAAAATGATGATCAGACAAACCCTGCCTCG
GGGAATTCAGTTTCAGAGTTTCCATGGAAATATGAGGATGTTTCCATACCAAAAATCATT
ATTGGGAGTTCTATACGAAACCCATCTACAAATTGTAGGTCTGGTGGAGACAAAGATGGG
CTTCTTCTGCCGGAGATCAATGAACTTGTAAAGGAATTCGGTTCGCCTCCAAAGGCTATA
TTTTCACCATGTGAGGATGTTGAAACACCGCTGCAGGGCACAGATTCACCCAAGGAATAC
AAGATTGTCGGAAGGGAGGACCATGAGCAAGAGATTAAGAACCTGAAGAATATTGTTAAA
ACTCTTAAAGAAAGGGAGAGGACTCGTGAGATCCAACTGCTCGAGTATTATGGCTGCAAG
GAGCAAGAAAAGGCCATCATGGAGCTTCAAAATCGCGTCAAGATACACAATTTGGAGGAC
AGGCATTTGGGTCTAAAGATCGAGTCTTTGAAAGCAGAGATTATGAAATTAGAGGCTCAA
GTGGCTGATTCTGCAAAGGTTGTCCCAGACCTTGAAGCTGCGAATTTGAAAATAAAGCAG
CTGAAAAAGAAGCTCAGGTTGGAAGCTGATCATAATAAGGAACAGATTTTATCCCTTAAT
GAAGGAGTTTCGAAGCTGCAGAACGAGGAGAAGAATCCTGTTCAAGTTGAATCGGATGTT
CAGTTGGAGCTCCAAAAGCTGAAGGACTTGGAGATCGAGGCTGATGAGTTGAGGAAATCT
AACCAAAGCTTAAGAGCGGAAAACTCGACAGTAGCTGATAAACTGGACTATCTTCAGCTC
TTTGCCATTTCTGCTCTGGAAGAGAATGTATTAGCAGAAGCACTGAAAGAAGAAAGTCTA
CAGCTGAGAAAGCAAAATGAAGAATTAGTAAAGAAAGTTGATCACATTCAAGAAGGTCGC
TACAGTGATGATGACGAAGTAGCCTATCTTAAATGGATAAATGCTTGCCTGCGATATGAG
CTGAGGAACTATCAGCCTGCCCTAGGCGAAACAACTGCAAGGGATCTCAGTAAAACGTTA
AGCCCCAACTCTAGGAATAAAGCCAAGCAACTAGTTGTTGAATATGCAGCTAAAGAAGAC
CAAGGGGACGGGGGAATCCATGTTTTGGATCTTGATTCTGACCAGTTATCCTCCCAAGAA
CCACATCTTATGAATTCGGGTGAGTTTGATGGTACTTCTATTGCTAATTCTTCAGCCCAT
AAGACTGACACTTCAAACAAAAGCAAAATCTTTCGTAAGCTTATGAGACTAATACGGGGA
AAGGACCATCATCATAATCATTCAGAAATGGTTCACAGCACTGAAGAGAATGCAGCAAGA
TGCTCTTATTGTTCTTCTGGGTACTGTTCAGATATGTCTGTCGTAGATACCGGAGCTATT
AGGCCCCAGAGCAGATCAAGAACACCATCTCCAGGTTCATCCAAAAAATTTATAGATTTC
CATTCATTTGATCAAGGCGCTACAACCAATAAAGGAGAAAGCAGAAACTATCCGACACGT
ACAAGGAGATACAGTGATGTGGGCTCTTTAGATTATATGTCAAAACGTCTCGCTGAATCA
CTTCAAGAAAAAGGAAATAACCATGACCAAGAAAATGTTCATAAATCTGAGTTGGCGAAA
TATGCAGAAGTTTTGAAAGGATCTCGCTCTAAAGAACCAGTTCGCAAGAGATCAGCATCA
GTTAGTTTCTTCTAA