Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042569
CDS Infomation

pacid=37453477 polypeptide=PGSC0003DMP400028873 locus=PGSC0003DMG400016511 ID=PGSC0003DMT400042569.v4.03 annot-version=v4.03
Sequence

ATGGGAGCCAAGTATCAACCTGATTGGAACTCGGAATCCACACTCTTGATCTGTGCATTT
TCCAATACACCAAAGTTTCGTCAAGTTGAAGCAGATAATGGAACAATTGTATCGAAGGAG
TGGATAACAGAGTGTTACAAACAACAAAAACTTGTTGAAATTGAAACTTATCTTATGCAT
GCTGGCAAGCCATGGAAACGTCAAAGTGTCTCTCATGAATCCAGCCAAGATCAAAAACCA
TCAACATCAAGAAAATCTCAAACAAGAGGAGAGAAAAGTTCACCTTTTAAGACAACTACT
GCTCCTTCATCTGAGGAGGTACATTCTGATAAAGTAAAAGATGGCTTCTCTCCATATAAA
GTGAAAAAATGGGCTATAGATGATCTTAACCGGACAATTTCATGGCTGGAGAATCAAGAT
GAAAGGCCAGAACCCCATGAGATGAAGAAAATAGCTGCTGAGGGAATTCTAACCTGTTTA
CAGGATGCCATAGATTCTCTTAATCAAGGGCAGGATATGCGTCAAATAACTGAACAGTGG
GAATGCATCCCTCGTGCCGTTGAGGAGCTGGCAAAGTTTGATGGTAGTTGTGTTGGTTCA
GCTACAATGCACAAGGATCTTTGCAAACAAGCTGCGACCTGTAAACAAATTTATGAGCTG
GAGTACAGAAATAGAGAAGACGATGAGCTTTCGAAGAAGAAAGAGCAGCAGACTCGTGTA
AGTGGAAAGGCTGGTGGCGCTGCCAAAGATGCTGCTGCATATGACAGTGATGATACTGTT
GAGATGACAGAAGAGGAAATTAACCATGCTTATAATGCCGTAGCATCTACGGTTAGAAAC
ACTAAGCGAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028873
PEP Infomation

pacid=37453477 transcript=PGSC0003DMT400042569 locus=PGSC0003DMG400016511 ID=PGSC0003DMT400042569.v4.03 annot-version=v4.03
Sequence

MGAKYQPDWNSESTLLICAFSNTPKFRQVEADNGTIVSKEWITECYKQQKLVEIETYLMH
AGKPWKRQSVSHESSQDQKPSTSRKSQTRGEKSSPFKTTTAPSSEEVHSDKVKDGFSPYK
VKKWAIDDLNRTISWLENQDERPEPHEMKKIAAEGILTCLQDAIDSLNQGQDMRQITEQW
ECIPRAVEELAKFDGSCVGSATMHKDLCKQAATCKQIYELEYRNREDDELSKKKEQQTRV
SGKAGGAAKDAAAYDSDDTVEMTEEEINHAYNAVASTVRNTKRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400042569
Transcript Infomation

pacid=37453477 locus=PGSC0003DMG400016511 ID=PGSC0003DMT400042569.v4.03 annot-version=v4.03
Sequence

ATGGGAGCCAAGTATCAACCTGATTGGAACTCGGAATCCACACTCTTGATCTGTGCATTT
TCCAATACACCAAAGTTTCGTCAAGTTGAAGCAGATAATGGAACAATTGTATCGAAGGAG
TGGATAACAGAGTGTTACAAACAACAAAAACTTGTTGAAATTGAAACTTATCTTATGCAT
GCTGGCAAGCCATGGAAACGTCAAAGTGTCTCTCATGAATCCAGCCAAGATCAAAAACCA
TCAACATCAAGAAAATCTCAAACAAGAGGAGAGAAAAGTTCACCTTTTAAGACAACTACT
GCTCCTTCATCTGAGGAGGTACATTCTGATAAAGTAAAAGATGGCTTCTCTCCATATAAA
GTGAAAAAATGGGCTATAGATGATCTTAACCGGACAATTTCATGGCTGGAGAATCAAGAT
GAAAGGCCAGAACCCCATGAGATGAAGAAAATAGCTGCTGAGGGAATTCTAACCTGTTTA
CAGGATGCCATAGATTCTCTTAATCAAGGGCAGGATATGCGTCAAATAACTGAACAGTGG
GAATGCATCCCTCGTGCCGTTGAGGAGCTGGCAAAGTTTGATGGTAGTTGTGTTGGTTCA
GCTACAATGCACAAGGATCTTTGCAAACAAGCTGCGACCTGTAAACAAATTTATGAGCTG
GAGTACAGAAATAGAGAAGACGATGAGCTTTCGAAGAAGAAAGAGCAGCAGACTCGTGTA
AGTGGAAAGGCTGGTGGCGCTGCCAAAGATGCTGCTGCATATGACAGTGATGATACTGTT
GAGATGACAGAAGAGGAAATTAACCATGCTTATAATGCCGTAGCATCTACGGTTAGAAAC
ACTAAGCGAGTGTAA