Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042548
CDS Infomation

pacid=37451267 polypeptide=PGSC0003DMP400028863 locus=PGSC0003DMG400016505 ID=PGSC0003DMT400042548.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGAGAAGGGAATTTCCGGCATTTCCGTACGAACCCTATTCCATTCAGCTTGAT
TTTATGAACGCCCTTTACCAATCCCTCAATAAAGGCGGCGTTGCCATGCTCGAAAGCCCC
ACTGGGACTGGTAAAACGCTTAGTATAATTTGCAGTGCTCTTCAATGGCTTGTTGATAAA
AAGCAACATCAGAAAACCCAGATGGATTCTTCTTCGAATTTAAGTGGGAAACAGGAAGAT
CAGTTGGGGGTTGATGATGAACCAGATTGGATGAGGGACTTTGTCATTAATAATGATACC
AAATCCCCTGAGAAGAAGACGAAGGAAAAGAAGCAAATGGGGTTCAACAAAAAAATTGAT
AGGAAAGGAAAAAGGGACAATGTGAGAGATTTAATTACTAACGGGGGTGGGAAGGATGAA
GATACTGACACTGAAAAGGTAAAGAATTTACTGACTAAACATGAGGTTGAGGGAATGGAT
GAAGAGGAGTTTTTGGTTGAAGAGTATGAGAGTGAAGATGAAAATGGAGGGCGATCGAAA
AGGAAGGGTGGTGGGGTGCCGGTTAATTCCTCGAGTGAGGAAGAAAAAGATGAAGATAAC
ATGGAAGATGAAGAGGATGAGGCTAGACCCAAGATTTACTTCTGTAGCCGGACACATTCA
CAACTTTCACAGTTCGTAAAGGAGTTAAGGAAGACTAAATTTGCGGATGAAGTAAAGGTT
GTATGCTTAGGATCTAGGAAGAATTTCTGCATTAATAAAGATGTGTTGAAGTTAGGCAGC
TCCGCTCAGATAAATGAGAAATGTTTGGAGCTTCAAAAAAGTAGGAAGAAGGAAATTTCT
AAAATATCGAAGACAAAGAACATCAGAGCTTGTGGCAGAGCGGGAAGGTCCAAGACGTCC
TCAGGATGCCCAATGCTTAGGAATCACAAAAGAGGAAATGAATTCCGAAGTGAGGTTTCT
CAACAAGGGCCCTTGGATATTGAGGATCTTGTTCAGATTGGAAATGACTTAAAAACTTGC
CCTTACTATGGCTCAAGAAGCATGGTCCACACAGCAGATCTTGTGGTTCTTCCTTATCAA
TCACTTCTTTCAAAATCATCGCGTGAATCACTTGGTTTAAGTTTAAAAGATAGTGTTGTT
GTCATAGATGAAGCTCATAATTTAGCTGATTCTCTCGTCAGCATGCACAACGCAAAAATT
ACACTGTCACAGTTGGAACTTGTGCATTCGCACTTGGAGAGTTACTTCATACGCTTTCGC
AATCTGTTAGGGCCAGGCAACCGAAGATATATTCAAATAATGATGGTCCTTACTCGGTCT
TTTCTACAAGTTTTGCGTAATGAGAATTGTCAAAGCACCTTTTACCCCCTTTGTAATGCT
GAGGGAAGTAAAAGTGGCTTTGAGTCATCCACGGCGATAAACGAGTTTCTATTTGCCCTC
AATATTGACAACATAAATCTGTATAAGCTCTTGTTGTATATAGAAGAAAGCAATATTATG
CACAAGGTATGTGGATATGGACATAAATTAGCACTCTCAGTAGAAGTTTCAGGATTGAAA
AATGACGACCAAAGCAGTCATGATGAAAGTGCATTATCTGGTTTCCAAGCATTAGTTAAC
ATGTTACTGTCACTGACAAATAAAGATGGTGATGGAAGAATAATAATATCAAGGCCAAGG
CCAAGGCCAAAATGCTCAATGCAACAAGGAGGGTATTTGAAATATGTCATGCTCACAGGA
GAAAAGATATTTTCTGAGATCTTGAATCAAGCTCATGCTGTCATATTGGCTGGTGGGACT
TTACAACCTATAGAGGAAACAAAAGAACGCCTATTTCCTTGGTTACCACCGGATCAGTTG
CATTTCTTTTCCTGTGGTCATATCATCCCATCTGCAAACATTCTACCAATTGTTGTTCCT
CAGGGGCCTTCTGGCCACTCCTTTGATTTTAGTTACAGCGCCAGAAGCTCATCAGTCATG
ATACAAGAACTAGGGCTTTTGGTCTCCAATTTGGTAAATGTAGTTCCTGGAGGCATGGTT
CTTTTCTTCTCATCATTTGACTACGAAGGCCAGGTCTATGATGCATGGAAGGAGTCGGGC
ATCATTGGAAGAATTATGAAAAAGAAGCGCATATTTAGAGAACCTAGAAGAAGTACAGAT
GTGGAAACTGTTTTGAAGGAATACAAGGAAACAATTGATGCACTGTCCCATAGAAGTTCT
AAGCGGGATCCCGAATCAAGAAATGGTGCAATTCTCCTTGCTATTGTGGGTGGGAAAGTA
TCAGAAGGTATCAACTTCAGCGATGGGATGGGTCGATGCATAGTCATGGTTGGATTGCCC
TATCCTAGTCCTGCTGACATCGAGTTGATGGAGAGGATTAAACATATTGAAGGATTTGAT
ACTTCTAGTGGTAAGAACACTAAATTTCAGGCTGAAAGGAGCTGGTATAATGGAGATGCT
CAAGCTGGGCTGGACATCCTAAAAAGCTGCAAGCATAGAGGGAAGCAGTATTATGAGAAT
CTTTGCATGAAAGCTGTGAATCAATCAATTGGTAGAGCAATTCGGCATATTAACGACTAT
GCTGCCATCCTATTAGTTGATAAACGCTATACATATGATCCTTCTGAAAGAAACTCCTCA
CACTCAACCAACAAGCTCCCCCAGTGGATTAAAGGTTGTCTTGTTTCTGGAACAAAGAAT
TATGGAGAACTTCAGAGGCTGCTGCATCAATTCTTCAAGTTCCACAAAGGCAAAGAGGAC
AACCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028863
PEP Infomation

pacid=37451267 transcript=PGSC0003DMT400042548 locus=PGSC0003DMG400016505 ID=PGSC0003DMT400042548.v4.03 annot-version=v4.03
Sequence

MEERREFPAFPYEPYSIQLDFMNALYQSLNKGGVAMLESPTGTGKTLSIICSALQWLVDK
KQHQKTQMDSSSNLSGKQEDQLGVDDEPDWMRDFVINNDTKSPEKKTKEKKQMGFNKKID
RKGKRDNVRDLITNGGGKDEDTDTEKVKNLLTKHEVEGMDEEEFLVEEYESEDENGGRSK
RKGGGVPVNSSSEEEKDEDNMEDEEDEARPKIYFCSRTHSQLSQFVKELRKTKFADEVKV
VCLGSRKNFCINKDVLKLGSSAQINEKCLELQKSRKKEISKISKTKNIRACGRAGRSKTS
SGCPMLRNHKRGNEFRSEVSQQGPLDIEDLVQIGNDLKTCPYYGSRSMVHTADLVVLPYQ
SLLSKSSRESLGLSLKDSVVVIDEAHNLADSLVSMHNAKITLSQLELVHSHLESYFIRFR
NLLGPGNRRYIQIMMVLTRSFLQVLRNENCQSTFYPLCNAEGSKSGFESSTAINEFLFAL
NIDNINLYKLLLYIEESNIMHKVCGYGHKLALSVEVSGLKNDDQSSHDESALSGFQALVN
MLLSLTNKDGDGRIIISRPRPRPKCSMQQGGYLKYVMLTGEKIFSEILNQAHAVILAGGT
LQPIEETKERLFPWLPPDQLHFFSCGHIIPSANILPIVVPQGPSGHSFDFSYSARSSSVM
IQELGLLVSNLVNVVPGGMVLFFSSFDYEGQVYDAWKESGIIGRIMKKKRIFREPRRSTD
VETVLKEYKETIDALSHRSSKRDPESRNGAILLAIVGGKVSEGINFSDGMGRCIVMVGLP
YPSPADIELMERIKHIEGFDTSSGKNTKFQAERSWYNGDAQAGLDILKSCKHRGKQYYEN
LCMKAVNQSIGRAIRHINDYAAILLVDKRYTYDPSERNSSHSTNKLPQWIKGCLVSGTKN
YGELQRLLHQFFKFHKGKEDNQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400042548
Transcript Infomation

pacid=37451267 locus=PGSC0003DMG400016505 ID=PGSC0003DMT400042548.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGAGAAGGGAATTTCCGGCATTTCCGTACGAACCCTATTCCATTCAGCTTGAT
TTTATGAACGCCCTTTACCAATCCCTCAATAAAGGCGGCGTTGCCATGCTCGAAAGCCCC
ACTGGGACTGGTAAAACGCTTAGTATAATTTGCAGTGCTCTTCAATGGCTTGTTGATAAA
AAGCAACATCAGAAAACCCAGATGGATTCTTCTTCGAATTTAAGTGGGAAACAGGAAGAT
CAGTTGGGGGTTGATGATGAACCAGATTGGATGAGGGACTTTGTCATTAATAATGATACC
AAATCCCCTGAGAAGAAGACGAAGGAAAAGAAGCAAATGGGGTTCAACAAAAAAATTGAT
AGGAAAGGAAAAAGGGACAATGTGAGAGATTTAATTACTAACGGGGGTGGGAAGGATGAA
GATACTGACACTGAAAAGGTAAAGAATTTACTGACTAAACATGAGGTTGAGGGAATGGAT
GAAGAGGAGTTTTTGGTTGAAGAGTATGAGAGTGAAGATGAAAATGGAGGGCGATCGAAA
AGGAAGGGTGGTGGGGTGCCGGTTAATTCCTCGAGTGAGGAAGAAAAAGATGAAGATAAC
ATGGAAGATGAAGAGGATGAGGCTAGACCCAAGATTTACTTCTGTAGCCGGACACATTCA
CAACTTTCACAGTTCGTAAAGGAGTTAAGGAAGACTAAATTTGCGGATGAAGTAAAGGTT
GTATGCTTAGGATCTAGGAAGAATTTCTGCATTAATAAAGATGTGTTGAAGTTAGGCAGC
TCCGCTCAGATAAATGAGAAATGTTTGGAGCTTCAAAAAAGTAGGAAGAAGGAAATTTCT
AAAATATCGAAGACAAAGAACATCAGAGCTTGTGGCAGAGCGGGAAGGTCCAAGACGTCC
TCAGGATGCCCAATGCTTAGGAATCACAAAAGAGGAAATGAATTCCGAAGTGAGGTTTCT
CAACAAGGGCCCTTGGATATTGAGGATCTTGTTCAGATTGGAAATGACTTAAAAACTTGC
CCTTACTATGGCTCAAGAAGCATGGTCCACACAGCAGATCTTGTGGTTCTTCCTTATCAA
TCACTTCTTTCAAAATCATCGCGTGAATCACTTGGTTTAAGTTTAAAAGATAGTGTTGTT
GTCATAGATGAAGCTCATAATTTAGCTGATTCTCTCGTCAGCATGCACAACGCAAAAATT
ACACTGTCACAGTTGGAACTTGTGCATTCGCACTTGGAGAGTTACTTCATACGCTTTCGC
AATCTGTTAGGGCCAGGCAACCGAAGATATATTCAAATAATGATGGTCCTTACTCGGTCT
TTTCTACAAGTTTTGCGTAATGAGAATTGTCAAAGCACCTTTTACCCCCTTTGTAATGCT
GAGGGAAGTAAAAGTGGCTTTGAGTCATCCACGGCGATAAACGAGTTTCTATTTGCCCTC
AATATTGACAACATAAATCTGTATAAGCTCTTGTTGTATATAGAAGAAAGCAATATTATG
CACAAGGTATGTGGATATGGACATAAATTAGCACTCTCAGTAGAAGTTTCAGGATTGAAA
AATGACGACCAAAGCAGTCATGATGAAAGTGCATTATCTGGTTTCCAAGCATTAGTTAAC
ATGTTACTGTCACTGACAAATAAAGATGGTGATGGAAGAATAATAATATCAAGGCCAAGG
CCAAGGCCAAAATGCTCAATGCAACAAGGAGGGTATTTGAAATATGTCATGCTCACAGGA
GAAAAGATATTTTCTGAGATCTTGAATCAAGCTCATGCTGTCATATTGGCTGGTGGGACT
TTACAACCTATAGAGGAAACAAAAGAACGCCTATTTCCTTGGTTACCACCGGATCAGTTG
CATTTCTTTTCCTGTGGTCATATCATCCCATCTGCAAACATTCTACCAATTGTTGTTCCT
CAGGGGCCTTCTGGCCACTCCTTTGATTTTAGTTACAGCGCCAGAAGCTCATCAGTCATG
ATACAAGAACTAGGGCTTTTGGTCTCCAATTTGGTAAATGTAGTTCCTGGAGGCATGGTT
CTTTTCTTCTCATCATTTGACTACGAAGGCCAGGTCTATGATGCATGGAAGGAGTCGGGC
ATCATTGGAAGAATTATGAAAAAGAAGCGCATATTTAGAGAACCTAGAAGAAGTACAGAT
GTGGAAACTGTTTTGAAGGAATACAAGGAAACAATTGATGCACTGTCCCATAGAAGTTCT
AAGCGGGATCCCGAATCAAGAAATGGTGCAATTCTCCTTGCTATTGTGGGTGGGAAAGTA
TCAGAAGGTATCAACTTCAGCGATGGGATGGGTCGATGCATAGTCATGGTTGGATTGCCC
TATCCTAGTCCTGCTGACATCGAGTTGATGGAGAGGATTAAACATATTGAAGGATTTGAT
ACTTCTAGTGGTAAGAACACTAAATTTCAGGCTGAAAGGAGCTGGTATAATGGAGATGCT
CAAGCTGGGCTGGACATCCTAAAAAGCTGCAAGCATAGAGGGAAGCAGTATTATGAGAAT
CTTTGCATGAAAGCTGTGAATCAATCAATTGGTAGAGCAATTCGGCATATTAACGACTAT
GCTGCCATCCTATTAGTTGATAAACGCTATACATATGATCCTTCTGAAAGAAACTCCTCA
CACTCAACCAACAAGCTCCCCCAGTGGATTAAAGGTTGTCTTGTTTCTGGAACAAAGAAT
TATGGAGAACTTCAGAGGCTGCTGCATCAATTCTTCAAGTTCCACAAAGGCAAAGAGGAC
AACCAGTAA