Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042540
CDS Infomation

pacid=37452537 polypeptide=PGSC0003DMP400028858 locus=PGSC0003DMG400016501 ID=PGSC0003DMT400042540.v4.03 annot-version=v4.03
Sequence

ATGGACAGACAAAACCTAGCTTCATCGTCCGCTCCCCGTGGTGGTGCCACTGTCCATCCT
CCCCCACAACACGATGCTTGGATCAATACCTACCGGAATTTTCATCCTCAGTGGCAGTCT
CTTCTTCCTCCACCGCACCAGTCAGCCATTCCAATATCAATATCCAGAGTTAATCAGGTA
GATGCTGGAAGACTAGACATTGAAATGTCAGCCATGCTAAAAGAGCAGTTGGTTAAGGTC
TTTTCTTTAATGAAGCCAGGAATGTTATTTCAATATGAACCAGAACTTGATGCTTTCCTT
GAGTTTCTAATCTGGCGATTTTCTATTTGGGTTGATAAGCCTACTCCTGGTAATGCTCTC
ATGAATCTGAGATACAGAGATGAGCGTGCAAGTGAGATTAGAGGAAAAGTGAGGACTGGA
TTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGT
GGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGCGACTCT
GAGCAGAGGTCCTTGGCACGTGGAGTGTGGTTGTTAATGCAACGGATGGAGGGGATCTAT
AAAGCAGCATCTTTTAGCAATTTACTTCTCTTTCTTTACACCGGAAGGTTCAGGAATCTC
ATTGAAAGAGCTTTAAGAGCTAGACTTGTTTATGGGAGCCCAAATATGAACAGAGCTGTG
AGCTTTGAGTACATGAATCGTCAGTTGGTGTGGAATGAATTCTCGGAACTGCTGCTCTTG
CTTCTTCCCCTTCTCAATTCAGCATCTGTCAAGAGTTTCCTTCGTCCATTCTCAAAGGAC
AAATCTTCAGATTCTTCAGTAGATGAATCTTTATGCCCCATCTGCCAGGGAACCCCATCA
ATTCCATTTGTAGCTATCCCTTGTCAGCATAGGTACTGTTACTACTGTCTTCAAACAAGG
TGCTCTGCATCTTCATCATTTCGTTGCCCCAGATGTGGTGAACCAGTTGCTGCTATGCAA
CGGCATGGTGGTTTAGTCAGCAACATTCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028858
PEP Infomation

pacid=37452537 transcript=PGSC0003DMT400042540 locus=PGSC0003DMG400016501 ID=PGSC0003DMT400042540.v4.03 annot-version=v4.03
Sequence

MDRQNLASSSAPRGGATVHPPPQHDAWINTYRNFHPQWQSLLPPPHQSAIPISISRVNQV
DAGRLDIEMSAMLKEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNAL
MNLRYRDERASEIRGKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDS
EQRSLARGVWLLMQRMEGIYKAASFSNLLLFLYTGRFRNLIERALRARLVYGSPNMNRAV
SFEYMNRQLVWNEFSELLLLLLPLLNSASVKSFLRPFSKDKSSDSSVDESLCPICQGTPS
IPFVAIPCQHRYCYYCLQTRCSASSSFRCPRCGEPVAAMQRHGGLVSNIP*

Transcript Sequence

Transcript ID

PGSC0003DMT400042540
Transcript Infomation

pacid=37452537 locus=PGSC0003DMG400016501 ID=PGSC0003DMT400042540.v4.03 annot-version=v4.03
Sequence

ATGGACAGACAAAACCTAGCTTCATCGTCCGCTCCCCGTGGTGGTGCCACTGTCCATCCT
CCCCCACAACACGATGCTTGGATCAATACCTACCGGAATTTTCATCCTCAGTGGCAGTCT
CTTCTTCCTCCACCGCACCAGTCAGCCATTCCAATATCAATATCCAGAGTTAATCAGGTA
GATGCTGGAAGACTAGACATTGAAATGTCAGCCATGCTAAAAGAGCAGTTGGTTAAGGTC
TTTTCTTTAATGAAGCCAGGAATGTTATTTCAATATGAACCAGAACTTGATGCTTTCCTT
GAGTTTCTAATCTGGCGATTTTCTATTTGGGTTGATAAGCCTACTCCTGGTAATGCTCTC
ATGAATCTGAGATACAGAGATGAGCGTGCAAGTGAGATTAGAGGAAAAGTGAGGACTGGA
TTAGAGGGACCAGGACTTACTGTTGCTCAAAAGATATGGTACTGTGTTGCAACAGTTGGT
GGTCAATATATATGGGCTCGTCTACAATCATTTTCTGCTTTTCGGAGATGGGGCGACTCT
GAGCAGAGGTCCTTGGCACGTGGAGTGTGGTTGTTAATGCAACGGATGGAGGGGATCTAT
AAAGCAGCATCTTTTAGCAATTTACTTCTCTTTCTTTACACCGGAAGGTTCAGGAATCTC
ATTGAAAGAGCTTTAAGAGCTAGACTTGTTTATGGGAGCCCAAATATGAACAGAGCTGTG
AGCTTTGAGTACATGAATCGTCAGTTGGTGTGGAATGAATTCTCGGAACTGCTGCTCTTG
CTTCTTCCCCTTCTCAATTCAGCATCTGTCAAGAGTTTCCTTCGTCCATTCTCAAAGGAC
AAATCTTCAGATTCTTCAGTAGATGAATCTTTATGCCCCATCTGCCAGGGAACCCCATCA
ATTCCATTTGTAGCTATCCCTTGTCAGCATAGGTACTGTTACTACTGTCTTCAAACAAGG
TGCTCTGCATCTTCATCATTTCGTTGCCCCAGATGTGGTGAACCAGTTGCTGCTATGCAA
CGGCATGGTGGTTTAGTCAGCAACATTCCTTAG