Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042536
CDS Infomation

pacid=37453798 polypeptide=PGSC0003DMP400028854 locus=PGSC0003DMG400016500 ID=PGSC0003DMT400042536.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCTTTTCGCTCTCCGAATTTCCAGTTTACACAATCAAGAAATTGTCAGATCA
TGGAACTTAGCAAAATCTGGTACTAAGAAACTGTGTTCATCTAACATAAATGTGAATGAG
CAGAGTTTTGGCTGTGTAAAATATGTCGTTCTGCAAGGACATCTTTCTGGATCATTGTCC
CAAAAGATTCCAGTGAAATGCATTCCTTCAGAAGCACTAGGATCAGTGGCAGCTACAGGA
AACCCTGACCAAAACATTATTATGGTGGACTCTTCTATAGTCAGTAGTCACAGGGATGAG
ATGGAATTCAGCCGAGTCAATTGTCTTGTGTGGGTACTGCATGAGTCTGCAAGAAGCTTT
GCAGTTGCAGTACAGACCCTTGAATTGGCTAAAAATAGGCCTGAGCTTGCAATGGCATGG
GTTGGGGTGGATGTGCATGCCTGGCATAAAAGCATCGCATATCAGGTAGCAATTTATGCT
TTGTTCAAAGCAGCAATAGAAGTGGAAGTGTTTCTTTCTCGCAAACGCAGCAACAATGTT
TCTTCTGTTCATGAAATTTTATCCCCAATCACCAACTTTCTTGGAGAGCGCATTGAAAGT
CAGTTGAATTTGAGGCATCCAAAGCTGGTGCAATGGTTTAGAACACTGGAGCTGCCACGG
ATTGCAGGAATGTTCATTCCCCTATTCAAGAAATGGTCTGTGGACTATGCAGGAAGTGGT
GTTGCAGGAAATATCTTGGCAATAAGTTGTTGCACAGCAGTGCGGAAATTAGGTTCAGGA
CGAGTTTCTTGTCCTTTGTTTTCAGCTTCAGTTGAAGATGCATTAGTAGAGCTCATGAAC
TTGTCACATAGACTTGTTTCAATTGATAAATTGCACTATTTAGCTACTGAGGCTGGATTC
GAAGAAGACTTCTTGATCCATTTTGGTAGTAAGGTTCTACCAAGTAACAATATTGAAGAT
GTAGAATTTTGGATAGGATTGGTTCAACGAAAACTCAGTAATGCATTTCACAGAGAAAAT
GTGATTGCAGACAAGCATAATTTTCACGACAAGGTTCAAGAAAATAGTTTAGCTACCCTG
GGACTTTTTGCATATCTGGGAAGAGAGACAAGATTGTTCCTCTCGGAAATGGGTTTAAAG
GATCTTGATGAGCAAACTAGAGATTTTCTGAGTTACTTAGAATGTGGTAGCCTTCTTATG
CATCCAGAATTCTCCACTCTCTCTGAGTATCAGCTCTTCATGGAGGTAGTAGCCAATGAA
ATTGGATGGCTCGACTTTTATGCTGAATCTGCTAGCAAGTTTTGTGTCAAAAGAAGATCC
AAACAACATCCAATTCAAGCGGAAAAAGAAATAATTTTGTACACTGTTTTAACTGTATGC
TATGATGTTATAGCTGGATTCGCCCACTATAACAATTCTGCACAGCAGCCATTAGATGCA
AAGTTACTGGACTTCTTGCTTCAGAGTCAGAGTCTGCTGTCTGTATGTCTGGAGGACTAC
TGGGCAGCTTATGATAGAACAGGAGAAGTGCAAAAATTTGCTGATAGAAGTGCATCTGAT
CCGGCAGCATCTTTGTTTAGTAAAGGTGGAATGGGTTCATCCATCATATTGGACGTGAAA
GAGAAGCCAATACATCAATATAGATCTAGATCGAATCAGACCACCAGCTCTGCTGTGATG
GACCCTGTGACACTGGTGGAATCGGAATGCTCTACTGCACCCAAACCAATGCATGAAAAT
TTACTAAGAAAATCTATGACCAAGCTGATATCTGCAAGTGTTGATTTCTGGATGGGTACT
GAATTGCTCTTTACAGACGTATCGGATGCTTTAGAGCTACTTATAAAGCAGTTGAAAGGC
CGTCAACTCACCAAAAGGGAGAGAAAGAAAATGAAGAGAACGCTGGGTGATATAGCTACC
CTTGTTCCCATAACCATCTTAATGCTAATCCCTGTTTCCGCAGTGGGTCATGCAGCAATG
CTAGCGGCAATCAAGAAATATGTCCCAAGTTTGATTCCTTCTCCGTTTTCTTCTGAAAGG
CTTGATCTAATGAAACAATTAAAGAGAACGAAGAAGAAAGAAGTCCAAGCTCGAAGCAGC
ATAGACAACCCTTCTTCTAAAGTTGTAGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028854
PEP Infomation

pacid=37453798 transcript=PGSC0003DMT400042536 locus=PGSC0003DMG400016500 ID=PGSC0003DMT400042536.v4.03 annot-version=v4.03
Sequence

MASLFALRISSLHNQEIVRSWNLAKSGTKKLCSSNINVNEQSFGCVKYVVLQGHLSGSLS
QKIPVKCIPSEALGSVAATGNPDQNIIMVDSSIVSSHRDEMEFSRVNCLVWVLHESARSF
AVAVQTLELAKNRPELAMAWVGVDVHAWHKSIAYQVAIYALFKAAIEVEVFLSRKRSNNV
SSVHEILSPITNFLGERIESQLNLRHPKLVQWFRTLELPRIAGMFIPLFKKWSVDYAGSG
VAGNILAISCCTAVRKLGSGRVSCPLFSASVEDALVELMNLSHRLVSIDKLHYLATEAGF
EEDFLIHFGSKVLPSNNIEDVEFWIGLVQRKLSNAFHRENVIADKHNFHDKVQENSLATL
GLFAYLGRETRLFLSEMGLKDLDEQTRDFLSYLECGSLLMHPEFSTLSEYQLFMEVVANE
IGWLDFYAESASKFCVKRRSKQHPIQAEKEIILYTVLTVCYDVIAGFAHYNNSAQQPLDA
KLLDFLLQSQSLLSVCLEDYWAAYDRTGEVQKFADRSASDPAASLFSKGGMGSSIILDVK
EKPIHQYRSRSNQTTSSAVMDPVTLVESECSTAPKPMHENLLRKSMTKLISASVDFWMGT
ELLFTDVSDALELLIKQLKGRQLTKRERKKMKRTLGDIATLVPITILMLIPVSAVGHAAM
LAAIKKYVPSLIPSPFSSERLDLMKQLKRTKKKEVQARSSIDNPSSKVVE*

Transcript Sequence

Transcript ID

PGSC0003DMT400042536
Transcript Infomation

pacid=37453798 locus=PGSC0003DMG400016500 ID=PGSC0003DMT400042536.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCCTTTTCGCTCTCCGAATTTCCAGTTTACACAATCAAGAAATTGTCAGATCA
TGGAACTTAGCAAAATCTGGTACTAAGAAACTGTGTTCATCTAACATAAATGTGAATGAG
CAGAGTTTTGGCTGTGTAAAATATGTCGTTCTGCAAGGACATCTTTCTGGATCATTGTCC
CAAAAGATTCCAGTGAAATGCATTCCTTCAGAAGCACTAGGATCAGTGGCAGCTACAGGA
AACCCTGACCAAAACATTATTATGGTGGACTCTTCTATAGTCAGTAGTCACAGGGATGAG
ATGGAATTCAGCCGAGTCAATTGTCTTGTGTGGGTACTGCATGAGTCTGCAAGAAGCTTT
GCAGTTGCAGTACAGACCCTTGAATTGGCTAAAAATAGGCCTGAGCTTGCAATGGCATGG
GTTGGGGTGGATGTGCATGCCTGGCATAAAAGCATCGCATATCAGGTAGCAATTTATGCT
TTGTTCAAAGCAGCAATAGAAGTGGAAGTGTTTCTTTCTCGCAAACGCAGCAACAATGTT
TCTTCTGTTCATGAAATTTTATCCCCAATCACCAACTTTCTTGGAGAGCGCATTGAAAGT
CAGTTGAATTTGAGGCATCCAAAGCTGGTGCAATGGTTTAGAACACTGGAGCTGCCACGG
ATTGCAGGAATGTTCATTCCCCTATTCAAGAAATGGTCTGTGGACTATGCAGGAAGTGGT
GTTGCAGGAAATATCTTGGCAATAAGTTGTTGCACAGCAGTGCGGAAATTAGGTTCAGGA
CGAGTTTCTTGTCCTTTGTTTTCAGCTTCAGTTGAAGATGCATTAGTAGAGCTCATGAAC
TTGTCACATAGACTTGTTTCAATTGATAAATTGCACTATTTAGCTACTGAGGCTGGATTC
GAAGAAGACTTCTTGATCCATTTTGGTAGTAAGGTTCTACCAAGTAACAATATTGAAGAT
GTAGAATTTTGGATAGGATTGGTTCAACGAAAACTCAGTAATGCATTTCACAGAGAAAAT
GTGATTGCAGACAAGCATAATTTTCACGACAAGGTTCAAGAAAATAGTTTAGCTACCCTG
GGACTTTTTGCATATCTGGGAAGAGAGACAAGATTGTTCCTCTCGGAAATGGGTTTAAAG
GATCTTGATGAGCAAACTAGAGATTTTCTGAGTTACTTAGAATGTGGTAGCCTTCTTATG
CATCCAGAATTCTCCACTCTCTCTGAGTATCAGCTCTTCATGGAGGTAGTAGCCAATGAA
ATTGGATGGCTCGACTTTTATGCTGAATCTGCTAGCAAGTTTTGTGTCAAAAGAAGATCC
AAACAACATCCAATTCAAGCGGAAAAAGAAATAATTTTGTACACTGTTTTAACTGTATGC
TATGATGTTATAGCTGGATTCGCCCACTATAACAATTCTGCACAGCAGCCATTAGATGCA
AAGTTACTGGACTTCTTGCTTCAGAGTCAGAGTCTGCTGTCTGTATGTCTGGAGGACTAC
TGGGCAGCTTATGATAGAACAGGAGAAGTGCAAAAATTTGCTGATAGAAGTGCATCTGAT
CCGGCAGCATCTTTGTTTAGTAAAGGTGGAATGGGTTCATCCATCATATTGGACGTGAAA
GAGAAGCCAATACATCAATATAGATCTAGATCGAATCAGACCACCAGCTCTGCTGTGATG
GACCCTGTGACACTGGTGGAATCGGAATGCTCTACTGCACCCAAACCAATGCATGAAAAT
TTACTAAGAAAATCTATGACCAAGCTGATATCTGCAAGTGTTGATTTCTGGATGGGTACT
GAATTGCTCTTTACAGACGTATCGGATGCTTTAGAGCTACTTATAAAGCAGTTGAAAGGC
CGTCAACTCACCAAAAGGGAGAGAAAGAAAATGAAGAGAACGCTGGGTGATATAGCTACC
CTTGTTCCCATAACCATCTTAATGCTAATCCCTGTTTCCGCAGTGGGTCATGCAGCAATG
CTAGCGGCAATCAAGAAATATGTCCCAAGTTTGATTCCTTCTCCGTTTTCTTCTGAAAGG
CTTGATCTAATGAAACAATTAAAGAGAACGAAGAAGAAAGAAGTCCAAGCTCGAAGCAGC
ATAGACAACCCTTCTTCTAAAGTTGTAGAGTGA