Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042505
CDS Infomation

pacid=37427400 polypeptide=PGSC0003DMP400028831 locus=PGSC0003DMG400016485 ID=PGSC0003DMT400042505.v4.03 annot-version=v4.03
Sequence

ATGCAGCCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATG
GCTCAGCAGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATTGGGATATTATTACCAG
CAACCTCCGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACCTCAGTACAACGCC
TCTGGTTTGGCTGCTACTACCGGTTCTGTCCAGCCGACTAGTGTTGATGAGATCCGAAGC
CTTTGGATCGGAGATCTACAGTTTTGGATGGATGAACAATACATTCTCAACTGTTTCGCA
CAAACTGGAGAGGTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAGTCAGAG
GGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATAT
AATGGGACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGT
TCCGGTGAAAAACGTTCTGATAATGGTCCTGAACATACAATATTTGTTGGCGACTTGGCA
GCTGATGTTTCTGATTATATGCTTCAGGAGACATTTAGGGCTAACTATCCTTCTGTGAAG
GGTGCTAAGGTTGTAACAGATAAGGCCACGGGGCGCACCAAGGGTTATGGTTTTGTTAAG
TTTGGGGATGAAAGTGAGCAGTTACGTGCTATGACTGAGATGAATGGACAGTTTTGCTCC
ACTAGGCCCATGCGGATTGGTCCTGCAGCTAATAAGAAGAGTATGGGTGGTCAAAGTCAA
GCTTCGTATCAAAGTTCACCTGGAACTCAAAATGAGGATGACCCTTCTAATACCACTGTC
AGTACATTTTTTTCTGGTATCATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400028831
PEP Infomation

pacid=37427400 transcript=PGSC0003DMT400042505 locus=PGSC0003DMG400016485 ID=PGSC0003DMT400042505.v4.03 annot-version=v4.03
Sequence

MQPANSMVPPPQYQQTQQWMAQQPPQYQVAPPQQLGYYYQQPPQQGGVPPPQQQQPQYNA
SGLAATTGSVQPTSVDEIRSLWIGDLQFWMDEQYILNCFAQTGEVTSAKVIRNKQSGQSE
GYGFIEFISHAAAERNLQAYNGTLMPNIEQNFRLNWASLGSGEKRSDNGPEHTIFVGDLA
ADVSDYMLQETFRANYPSVKGAKVVTDKATGRTKGYGFVKFGDESEQLRAMTEMNGQFCS
TRPMRIGPAANKKSMGGQSQASYQSSPGTQNEDDPSNTTVSTFFSGII*

Transcript Sequence

Transcript ID

PGSC0003DMT400042505
Transcript Infomation

pacid=37427400 locus=PGSC0003DMG400016485 ID=PGSC0003DMT400042505.v4.03 annot-version=v4.03
Sequence

ATGCAGCCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATG
GCTCAGCAGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATTGGGATATTATTACCAG
CAACCTCCGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACCTCAGTACAACGCC
TCTGGTTTGGCTGCTACTACCGGTTCTGTCCAGCCGACTAGTGTTGATGAGATCCGAAGC
CTTTGGATCGGAGATCTACAGTTTTGGATGGATGAACAATACATTCTCAACTGTTTCGCA
CAAACTGGAGAGGTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAGTCAGAG
GGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATAT
AATGGGACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGT
TCCGGTGAAAAACGTTCTGATAATGGTCCTGAACATACAATATTTGTTGGCGACTTGGCA
GCTGATGTTTCTGATTATATGCTTCAGGAGACATTTAGGGCTAACTATCCTTCTGTGAAG
GGTGCTAAGGTTGTAACAGATAAGGCCACGGGGCGCACCAAGGGTTATGGTTTTGTTAAG
TTTGGGGATGAAAGTGAGCAGTTACGTGCTATGACTGAGATGAATGGACAGTTTTGCTCC
ACTAGGCCCATGCGGATTGGTCCTGCAGCTAATAAGAAGAGTATGGGTGGTCAAAGTCAA
GCTTCGTATCAAAGTTCACCTGGAACTCAAAATGAGGATGACCCTTCTAATACCACTGTC
AGTACATTTTTTTCTGGTATCATTTGA