Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042503
CDS Infomation

pacid=37428784 polypeptide=PGSC0003DMP400028829 locus=PGSC0003DMG400016484 ID=PGSC0003DMT400042503.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTTCTCACCAATGGAATCTCACGCTTCTGTCCTCAATCCATCACTGAGCAG
CCTAAACTCCCAAAAGGGTCTAACTTTTTGCCTAATCCACCCGCCCCCAGAATCTCAAAT
TCAGGTAATTTCAAGATTAAAGCTGCTGATGCCAAGGCAACTGTTGAAGTTCCAGGTAAA
GAATCATCTTTATCAATCTCAAATGAAAACGACCCACTTCAGAAATTCTTGAAAAGAGAC
TATAAATGGGGTTTCAATGAAAATATTGAATCTTTTGCGCTGCCAAAAGGGCTTTCGGAG
GAAACTATAAGGTTGATTTCATCAAGAAAGAATGAGCCTGAATGGATGCTTGAGTATAGA
TTGAAATCGTATGAGAAATTTGTTAAAATGAAAGAGCCTAAATGGTCTGATAATCAGTAC
CCAGAAATTGATTTTCAGAATATTTGTTATTATTCAGAACCTAAAAAGAAACCAACTTTA
GATAGTCTTGATGAGGCTGACCCTGAGCTTGTTAGGTATTTTGATAAATTGGGTATTCCT
TTGAATGAAAGAAATCGTTTAGCAAATGTTGCAGTTGATGCTGTTCTTGATAGTGTTTCT
ATTGCCACAACTCATAGGAAGACTTTAGAGAAGTCTGGTGTGATTTTTTGTTCGATTTCT
GAGGCTATTAGGGAGTATCCAGATTTAGTCAGGAAGTATTTGTTTAGAGTTGTGCCCCCA
GAAGACAATTTTTACGCGGCTCTTAATTCAGCTGTGTTTAGTGATGGATCATTTGTGTAT
ATACCCAAGAACACCAAGTGTCCTATGCAAATATCTACTTATTTTAGAATAAATGCAATG
GAAACTGGACAATTCGAGAGGACTTTGATTGTTGCGGATGAAGGAAGTTTTGTTGAGTAT
TTAGAAGGGTGTACAGCACCTTCATATGATACAAATCAGTTGCATGCTGCTGTGGTGGAA
TTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGA
GATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATTTGTGCTGGG
GCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTAT
CCAAGTGTAGTGTTAGAAGGTGATGAATCGGTTGGTGAATTCTATTCTGTGGCATTGACC
AACAACTATCAGCAGGCAGATACAGGAACGAAGATGATACACAAAGGGAAGAATACGAGG
AGTAGGATTATTTCAAAGGGTATTTCTGCAGGAAATTCTAGAAACTGTTACAGAGGACTA
GTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTC
ATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAGGCCAAGAACCCCTCTGCC
CAGATAGAACATGAAGCCACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTCCAG
CAGAGAGGAATCGACTATGAGAAAGCAATGGCTGCAATGATCTCTGGGTTTTGCAGAGAT
GTTTTCAATGAACTCCCTGATGAATTTGGTGCTGAGGTGAACCAATTAATGAGCTTGAAG
CTTGAAGGGTCTGTAGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028829
PEP Infomation

pacid=37428784 transcript=PGSC0003DMT400042503 locus=PGSC0003DMG400016484 ID=PGSC0003DMT400042503.v4.03 annot-version=v4.03
Sequence

MASLLTNGISRFCPQSITEQPKLPKGSNFLPNPPAPRISNSGNFKIKAADAKATVEVPGK
ESSLSISNENDPLQKFLKRDYKWGFNENIESFALPKGLSEETIRLISSRKNEPEWMLEYR
LKSYEKFVKMKEPKWSDNQYPEIDFQNICYYSEPKKKPTLDSLDEADPELVRYFDKLGIP
LNERNRLANVAVDAVLDSVSIATTHRKTLEKSGVIFCSISEAIREYPDLVRKYLFRVVPP
EDNFYAALNSAVFSDGSFVYIPKNTKCPMQISTYFRINAMETGQFERTLIVADEGSFVEY
LEGCTAPSYDTNQLHAAVVELYCHEGAEIKYSTVQNWYAGDEEGRGGIYNFVTKRGICAG
ARSKISWTQVETGSAITWKYPSVVLEGDESVGEFYSVALTNNYQQADTGTKMIHKGKNTR
SRIISKGISAGNSRNCYRGLVQVLSSAENARNSSQCDSMLIGDKAAANTYPYIQAKNPSA
QIEHEATTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLK
LEGSVG*

Transcript Sequence

Transcript ID

PGSC0003DMT400042503
Transcript Infomation

pacid=37428784 locus=PGSC0003DMG400016484 ID=PGSC0003DMT400042503.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTTCTCACCAATGGAATCTCACGCTTCTGTCCTCAATCCATCACTGAGCAG
CCTAAACTCCCAAAAGGGTCTAACTTTTTGCCTAATCCACCCGCCCCCAGAATCTCAAAT
TCAGGTAATTTCAAGATTAAAGCTGCTGATGCCAAGGCAACTGTTGAAGTTCCAGGTAAA
GAATCATCTTTATCAATCTCAAATGAAAACGACCCACTTCAGAAATTCTTGAAAAGAGAC
TATAAATGGGGTTTCAATGAAAATATTGAATCTTTTGCGCTGCCAAAAGGGCTTTCGGAG
GAAACTATAAGGTTGATTTCATCAAGAAAGAATGAGCCTGAATGGATGCTTGAGTATAGA
TTGAAATCGTATGAGAAATTTGTTAAAATGAAAGAGCCTAAATGGTCTGATAATCAGTAC
CCAGAAATTGATTTTCAGAATATTTGTTATTATTCAGAACCTAAAAAGAAACCAACTTTA
GATAGTCTTGATGAGGCTGACCCTGAGCTTGTTAGGTATTTTGATAAATTGGGTATTCCT
TTGAATGAAAGAAATCGTTTAGCAAATGTTGCAGTTGATGCTGTTCTTGATAGTGTTTCT
ATTGCCACAACTCATAGGAAGACTTTAGAGAAGTCTGGTGTGATTTTTTGTTCGATTTCT
GAGGCTATTAGGGAGTATCCAGATTTAGTCAGGAAGTATTTGTTTAGAGTTGTGCCCCCA
GAAGACAATTTTTACGCGGCTCTTAATTCAGCTGTGTTTAGTGATGGATCATTTGTGTAT
ATACCCAAGAACACCAAGTGTCCTATGCAAATATCTACTTATTTTAGAATAAATGCAATG
GAAACTGGACAATTCGAGAGGACTTTGATTGTTGCGGATGAAGGAAGTTTTGTTGAGTAT
TTAGAAGGGTGTACAGCACCTTCATATGATACAAATCAGTTGCATGCTGCTGTGGTGGAA
TTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGA
GATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATTTGTGCTGGG
GCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTAT
CCAAGTGTAGTGTTAGAAGGTGATGAATCGGTTGGTGAATTCTATTCTGTGGCATTGACC
AACAACTATCAGCAGGCAGATACAGGAACGAAGATGATACACAAAGGGAAGAATACGAGG
AGTAGGATTATTTCAAAGGGTATTTCTGCAGGAAATTCTAGAAACTGTTACAGAGGACTA
GTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTC
ATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAGGCCAAGAACCCCTCTGCC
CAGATAGAACATGAAGCCACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTCCAG
CAGAGAGGAATCGACTATGAGAAAGCAATGGCTGCAATGATCTCTGGGTTTTGCAGAGAT
GTTTTCAATGAACTCCCTGATGAATTTGGTGCTGAGGTGAACCAATTAATGAGCTTGAAG
CTTGAAGGGTCTGTAGGTTAA