Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042499
CDS Infomation

pacid=37427388 polypeptide=PGSC0003DMP400028825 locus=PGSC0003DMG400016482 ID=PGSC0003DMT400042499.v4.03 annot-version=v4.03
Sequence

ATGTCTTGTTCAAATTTGACAATGTTGGTGTCCTCAAAACCATCTCTTTCTGACTCCTCT
GCGCTTTCCTTCCGCTCTGCTGTCAGCTCTTTTCAGCTTCCTAACCACAACTCATCAGGC
CCTTCAAACCCCTCAAGATCATCATCAGTTATCCCTGTTCAATGTGGTCTCCGTGATCTG
CGTGATCGAATTGACTCTGTCAAGAACACACAGAAGATTACTGAGGCTATGAAGCTTGTG
GCTGCTGCTAAAGTCAGAAGAGCACAAGAAGCTGTTGTGGGTGCTAGGCCTTTCTCTGAG
ACTTTGGTTGAGGTACTTTACAACATCAATGAGCAGCTTCAGACAGATGACATTGATGTA
CCACTCACCAAAGTAAGACCTGTCAAGAAAGTGGCTTTGGTTGTTGTCACCGGTGACCGT
GGTCTTTGTGGTGGTTTTAACAACTATATCATCAAAAAAGCTGAGGCCAGGATTAGAGAT
TTGAAAGCTCTTGGCATTGATTACACTATTATCAGTGTTGGGAAAAAGGGTAATTCTTAT
TTCCTCCGCAGGCCTTACATCCCTGTAGATAAATTTCTTGAAGGAAGCAGTCTGCCCACT
GCTAAAGATGCTCAGGCCATTGCTGATGATGTTTTCTCACTTTTTGTGAGTGAAGAGGTT
GACAAAGTTGAGCTTCTCTACACAAAGTTTGTGTCTTTAGTGAAATCTGAGCCAGTCATT
CACACCCTGCTTCCATTGTCACCAAAGGGAGAGATTTGTGACATCAATGGGAACTGTGTT
GATGCAGCTGAAGATGAGTTCTTTAGGTTGACAACAAAGGAAGGGAAATTGACAGTGGAA
AGAGATGTCATGAGGACTAAGACAACTGATTTTTCAGCAATCTTGCAATTCGAGCAGGAC
CCTGTTCAGATTCTTGATGCCTTGCTGCCACTTTACTTGAACAGTCAAATCCTCAGGGCA
TTGCAGGAGTCATTAGCCAGTGAGCTTGCTTCTAGGATGAGTGCCATGAGCAGTGCAACA
GATAATGCATCTGAATTGAAGAAGAATCTATCTAGAGTGTACAACAGACAGCGTCAGGCA
AAGATTACAGGAGAAATATTGGAGATTGTTGCTGGAGCAGATGCCTTGGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400028825
PEP Infomation

pacid=37427388 transcript=PGSC0003DMT400042499 locus=PGSC0003DMG400016482 ID=PGSC0003DMT400042499.v4.03 annot-version=v4.03
Sequence

MSCSNLTMLVSSKPSLSDSSALSFRSAVSSFQLPNHNSSGPSNPSRSSSVIPVQCGLRDL
RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDV
PLTKVRPVKKVALVVVTGDRGLCGGFNNYIIKKAEARIRDLKALGIDYTIISVGKKGNSY
FLRRPYIPVDKFLEGSSLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVI
HTLLPLSPKGEICDINGNCVDAAEDEFFRLTTKEGKLTVERDVMRTKTTDFSAILQFEQD
PVQILDALLPLYLNSQILRALQESLASELASRMSAMSSATDNASELKKNLSRVYNRQRQA
KITGEILEIVAGADALV*

Transcript Sequence

Transcript ID

PGSC0003DMT400042499
Transcript Infomation

pacid=37427388 locus=PGSC0003DMG400016482 ID=PGSC0003DMT400042499.v4.03 annot-version=v4.03
Sequence

ATGTCTTGTTCAAATTTGACAATGTTGGTGTCCTCAAAACCATCTCTTTCTGACTCCTCT
GCGCTTTCCTTCCGCTCTGCTGTCAGCTCTTTTCAGCTTCCTAACCACAACTCATCAGGC
CCTTCAAACCCCTCAAGATCATCATCAGTTATCCCTGTTCAATGTGGTCTCCGTGATCTG
CGTGATCGAATTGACTCTGTCAAGAACACACAGAAGATTACTGAGGCTATGAAGCTTGTG
GCTGCTGCTAAAGTCAGAAGAGCACAAGAAGCTGTTGTGGGTGCTAGGCCTTTCTCTGAG
ACTTTGGTTGAGGTACTTTACAACATCAATGAGCAGCTTCAGACAGATGACATTGATGTA
CCACTCACCAAAGTAAGACCTGTCAAGAAAGTGGCTTTGGTTGTTGTCACCGGTGACCGT
GGTCTTTGTGGTGGTTTTAACAACTATATCATCAAAAAAGCTGAGGCCAGGATTAGAGAT
TTGAAAGCTCTTGGCATTGATTACACTATTATCAGTGTTGGGAAAAAGGGTAATTCTTAT
TTCCTCCGCAGGCCTTACATCCCTGTAGATAAATTTCTTGAAGGAAGCAGTCTGCCCACT
GCTAAAGATGCTCAGGCCATTGCTGATGATGTTTTCTCACTTTTTGTGAGTGAAGAGGTT
GACAAAGTTGAGCTTCTCTACACAAAGTTTGTGTCTTTAGTGAAATCTGAGCCAGTCATT
CACACCCTGCTTCCATTGTCACCAAAGGGAGAGATTTGTGACATCAATGGGAACTGTGTT
GATGCAGCTGAAGATGAGTTCTTTAGGTTGACAACAAAGGAAGGGAAATTGACAGTGGAA
AGAGATGTCATGAGGACTAAGACAACTGATTTTTCAGCAATCTTGCAATTCGAGCAGGAC
CCTGTTCAGATTCTTGATGCCTTGCTGCCACTTTACTTGAACAGTCAAATCCTCAGGGCA
TTGCAGGAGTCATTAGCCAGTGAGCTTGCTTCTAGGATGAGTGCCATGAGCAGTGCAACA
GATAATGCATCTGAATTGAAGAAGAATCTATCTAGAGTGTACAACAGACAGCGTCAGGCA
AAGATTACAGGAGAAATATTGGAGATTGTTGCTGGAGCAGATGCCTTGGTTTAA