Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042485
CDS Infomation

pacid=37426098 polypeptide=PGSC0003DMP400028817 locus=PGSC0003DMG400016476 ID=PGSC0003DMT400042485.v4.03 annot-version=v4.03
Sequence

ATGGATGATAAAGTTGTTACTGTGGATGATCAAATTGTAGCAGAGCTTACAATCCCGGAA
AATGTTGCCAAAGAATTATTACTTGTGTCAAACTCATCTTCTTTAGAAACGGCACTCGAG
AAGCTGATAGAACTTGCCAAGGAGGAGGGTGGACGGTTAGATCTGTCGTCCAAGAATGTT
GTCACCACTGTCCTCCATCTCTGCCAGTCTCTGTCATCTATCTCTTACCGTTACCTCCTT
TTATTGTCTCTTAAGGTACTTAGAAATCTGTGTGCTGGGGAGATAATAAATCAGAATGAG
TTTCTTCAACAAAGAGGAGTTGAAATTGTCGTGGATGTTATTATGTCGGTAGGACTTACT
CCTGATCCTGATTGTATGATTATTCGAGTTGGGCTGCAACTTCTAGGAAACTACTCAGTG
GGTGGAGGAGAACGTCAATGTGATGTGTGGTACCAATTGTTTCCTCATAAGTTCTTGAAG
ATTGCTAGAGTTAGAAACCAGGAAATATGTGATCCTTTATGTATGGTTATTTACACTTGC
TGTGATGGTACGGATGGACTGCTTACAGATTTATGTTCGGAGAAAGGGTTGCCCATTCTG
ATAGAAATTTTGCGTACTGCATCAGCCGTTGGTCTTAAAGAAGTTTGGTTAAAATTGTTA
CTCTCAAAACTTTGCATTGAGGGCTCCTACATCTCATCAATTTTCTTCAAATTACATTCA
TATCCTTCCGTTGAGAACAATGGTGTTGTTACACATGTAGTTGATCAATTTGTTATTGAG
CAGTCTTATCTGTTGAGTACACTTTCAGAAATCTTGAATGAGCGAGTAGAGCATATTGTT
GTTTCTCATGATTTTGCTCGAAGTATCTTTGGGATATTGAAGAGTGCTTCTGGGGTTGCT
GATTTTTCAATAAGAGGGAAAAGTGATCTTCCAGTTGGGTCTGCTCCTATTGATGTTCTA
GGATACTCTCTCACCATCTTGAGAGATATTTGCGCTTCTGATCACATGACAAGCTCTAAG
GAAGAAAGTTCAAAGGATGTCGTGGACGTACTTGTTTCCTCTGGGCTTATTGAATTTCTT
TTGAACTTGCTTCGGGATCTTGAACCTCCAACGACAATTAGGAAAGCAATGAAGCAGGAT
CAGATCAAGGAGGGGACAATATCTTCTTCATTTAGGTGTTGTCCATACCAAGGTTTCCGG
AGAGATATCGTTGCCATCCTTGGAAATTGTGCTTATAGGAGAAGGCATGTCCAAGATGAG
ATTAGGGATAAAAATGGGATCCTTTTACTGCTACAACAGTGTGTTATAGATGAAGATAAT
CCTTTCTTAAGGGAGTGGGGAATCTGGTGTGTGCGAAACCTATTGGAAGGGAATGCAGAA
AACCAAGGGGCTATTACCGATTTGGAGCTTCAAGGAACTGTAGATGTTCCAGAACTTGTT
AGACTTGGGCTTCGAGTAGAAGTTGATCCCGTAACTCGTCACACAAAGCTTGTGAATTCT
TCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400028817
PEP Infomation

pacid=37426098 transcript=PGSC0003DMT400042485 locus=PGSC0003DMG400016476 ID=PGSC0003DMT400042485.v4.03 annot-version=v4.03
Sequence

MDDKVVTVDDQIVAELTIPENVAKELLLVSNSSSLETALEKLIELAKEEGGRLDLSSKNV
VTTVLHLCQSLSSISYRYLLLLSLKVLRNLCAGEIINQNEFLQQRGVEIVVDVIMSVGLT
PDPDCMIIRVGLQLLGNYSVGGGERQCDVWYQLFPHKFLKIARVRNQEICDPLCMVIYTC
CDGTDGLLTDLCSEKGLPILIEILRTASAVGLKEVWLKLLLSKLCIEGSYISSIFFKLHS
YPSVENNGVVTHVVDQFVIEQSYLLSTLSEILNERVEHIVVSHDFARSIFGILKSASGVA
DFSIRGKSDLPVGSAPIDVLGYSLTILRDICASDHMTSSKEESSKDVVDVLVSSGLIEFL
LNLLRDLEPPTTIRKAMKQDQIKEGTISSSFRCCPYQGFRRDIVAILGNCAYRRRHVQDE
IRDKNGILLLLQQCVIDEDNPFLREWGIWCVRNLLEGNAENQGAITDLELQGTVDVPELV
RLGLRVEVDPVTRHTKLVNSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400042485
Transcript Infomation

pacid=37426098 locus=PGSC0003DMG400016476 ID=PGSC0003DMT400042485.v4.03 annot-version=v4.03
Sequence

ATGGATGATAAAGTTGTTACTGTGGATGATCAAATTGTAGCAGAGCTTACAATCCCGGAA
AATGTTGCCAAAGAATTATTACTTGTGTCAAACTCATCTTCTTTAGAAACGGCACTCGAG
AAGCTGATAGAACTTGCCAAGGAGGAGGGTGGACGGTTAGATCTGTCGTCCAAGAATGTT
GTCACCACTGTCCTCCATCTCTGCCAGTCTCTGTCATCTATCTCTTACCGTTACCTCCTT
TTATTGTCTCTTAAGGTACTTAGAAATCTGTGTGCTGGGGAGATAATAAATCAGAATGAG
TTTCTTCAACAAAGAGGAGTTGAAATTGTCGTGGATGTTATTATGTCGGTAGGACTTACT
CCTGATCCTGATTGTATGATTATTCGAGTTGGGCTGCAACTTCTAGGAAACTACTCAGTG
GGTGGAGGAGAACGTCAATGTGATGTGTGGTACCAATTGTTTCCTCATAAGTTCTTGAAG
ATTGCTAGAGTTAGAAACCAGGAAATATGTGATCCTTTATGTATGGTTATTTACACTTGC
TGTGATGGTACGGATGGACTGCTTACAGATTTATGTTCGGAGAAAGGGTTGCCCATTCTG
ATAGAAATTTTGCGTACTGCATCAGCCGTTGGTCTTAAAGAAGTTTGGTTAAAATTGTTA
CTCTCAAAACTTTGCATTGAGGGCTCCTACATCTCATCAATTTTCTTCAAATTACATTCA
TATCCTTCCGTTGAGAACAATGGTGTTGTTACACATGTAGTTGATCAATTTGTTATTGAG
CAGTCTTATCTGTTGAGTACACTTTCAGAAATCTTGAATGAGCGAGTAGAGCATATTGTT
GTTTCTCATGATTTTGCTCGAAGTATCTTTGGGATATTGAAGAGTGCTTCTGGGGTTGCT
GATTTTTCAATAAGAGGGAAAAGTGATCTTCCAGTTGGGTCTGCTCCTATTGATGTTCTA
GGATACTCTCTCACCATCTTGAGAGATATTTGCGCTTCTGATCACATGACAAGCTCTAAG
GAAGAAAGTTCAAAGGATGTCGTGGACGTACTTGTTTCCTCTGGGCTTATTGAATTTCTT
TTGAACTTGCTTCGGGATCTTGAACCTCCAACGACAATTAGGAAAGCAATGAAGCAGGAT
CAGATCAAGGAGGGGACAATATCTTCTTCATTTAGGTGTTGTCCATACCAAGGTTTCCGG
AGAGATATCGTTGCCATCCTTGGAAATTGTGCTTATAGGAGAAGGCATGTCCAAGATGAG
ATTAGGGATAAAAATGGGATCCTTTTACTGCTACAACAGTGTGTTATAGATGAAGATAAT
CCTTTCTTAAGGGAGTGGGGAATCTGGTGTGTGCGAAACCTATTGGAAGGGAATGCAGAA
AACCAAGGGGCTATTACCGATTTGGAGCTTCAAGGAACTGTAGATGTTCCAGAACTTGTT
AGACTTGGGCTTCGAGTAGAAGTTGATCCCGTAACTCGTCACACAAAGCTTGTGAATTCT
TCATGA