Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042438
CDS Infomation

pacid=37425608 polypeptide=PGSC0003DMP400028788 locus=PGSC0003DMG400016457 ID=PGSC0003DMT400042438.v4.03 annot-version=v4.03
Sequence

ATGGATGAGTGTTTTCAAGATAAGGGGCCAAGTGAACCTTTACTAGTACTAGAACAGAAA
GAAGCAGCAGTGGAACATGTAAGCTCTGAGCTTGAAGACATATTGTCCGACACAAGATTG
TCGCATTTTCAGCGGCTTGGACGGGCATCTGCCGTTGAATTCAGAAATCTGTTTCGACTA
GCAGCTCCAGCAATCATTGTTTATTTGCTCAATAATGTTACTTCTATGTCTACTCAAATA
TTCTGTGGTCATCTTGGTAATCTTGAACTTGCTGCTGCTTCACTTGGCAATGAAGGTATT
CAACTCTTGGCCTATGGCGTCATGTTAGGGATGGGGAGTGCAGTGGAGACACTATGTGGA
CAAGCATATGGAGCTCACAAGTATGAAACATTGGGAATATATCTTCAAAGATCGACAATT
CTGCTTATGTTATCTGGAATACCGATTATGGTGGCTTACTTATTTTCAAAGCCAATTTTA
ATCTTACTTGGAGAATCAGAGAAAGTTGCATCAGCAGCTGCATTATTCGTTTATGGTTTA
ATTCCTCAAATATTTGCTTACGCTGCCAATTTCCCCATACAAAAGTTCTTGCAAGCCCAA
AGCATCGTGAATCCTAGTGCGTATATAGCAGCAGCCGCATTAGTCCTACATCTTTTCCTA
ACATGGATTGTGCTTTATGTATTCAAGTGGGGATTATTCGGAGGAGCAATGGTTCTAAGT
ATTTCATGGTGGATAGTAGTCGTTGCGCAATTTATGTACATATTGCAGAGCGATAAATGT
AAGAAAACGTGGAATGGATTTAGTTCGCAAGCGTTTTCAGGGCTGTGGGATTTTTATAAG
TTGTCAGCTGCTTCATCTGTGATGTTGTGCTTGGAGACTTGGTACTTTCAGATTTTAGTT
TTAGTTGCTGGTTTGCTTCCAAATCCTGAAGTGGCATTAGACTCTCTAGCTGTTTGTAAT
ACAATTCTTGGATGGGTGTTCATGATAGCTGCTGGGTTCAATGCAGCAGCAAGTGTGAGG
GTGAGCAATGAGTTGGGAGCAGGGCATCCGAAATCGGCCTCATTTTCAGTTTTGGTGGTG
ACATTAAGCTCATTTGTGATTGCTGTAGTGGCAGCCATAATAGTGATGATGTTTCGCGAT
GTGATGAGTTATGCATTCACTGGAGGCGAAACTATTGCTAAAGCAACTTCAGAACTTGCA
CCACTCTTGGCTGCCTCTATAATTCTTAATGGCATTCAGCCTGTTTTATCTGGGGTGGCG
GTTGGGTGTGGATGGCAAGGTTTTGTGGCATATGTTAACGTGGGATGTTACTACGTAGTT
GGTATTCCATTGGGTGCTCTTCTTGGGTTTCACTTCAAACTCGAAGCTAAGGGATTATGG
CTGGGCATGTTTGGTGGAACAGCAATGCAAACTCTTATCTTAGTATGGGCCACTTTTTCA
ACCAATTGGGAAGAAGAGGTGGAGAAAGCAAAAAATCGATTAGTTAAGTGGCAAGACATC
ATTAAGAAACCATTGTTGAATGAATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400028788
PEP Infomation

pacid=37425608 transcript=PGSC0003DMT400042438 locus=PGSC0003DMG400016457 ID=PGSC0003DMT400042438.v4.03 annot-version=v4.03
Sequence

MDECFQDKGPSEPLLVLEQKEAAVEHVSSELEDILSDTRLSHFQRLGRASAVEFRNLFRL
AAPAIIVYLLNNVTSMSTQIFCGHLGNLELAAASLGNEGIQLLAYGVMLGMGSAVETLCG
QAYGAHKYETLGIYLQRSTILLMLSGIPIMVAYLFSKPILILLGESEKVASAAALFVYGL
IPQIFAYAANFPIQKFLQAQSIVNPSAYIAAAALVLHLFLTWIVLYVFKWGLFGGAMVLS
ISWWIVVVAQFMYILQSDKCKKTWNGFSSQAFSGLWDFYKLSAASSVMLCLETWYFQILV
LVAGLLPNPEVALDSLAVCNTILGWVFMIAAGFNAAASVRVSNELGAGHPKSASFSVLVV
TLSSFVIAVVAAIIVMMFRDVMSYAFTGGETIAKATSELAPLLAASIILNGIQPVLSGVA
VGCGWQGFVAYVNVGCYYVVGIPLGALLGFHFKLEAKGLWLGMFGGTAMQTLILVWATFS
TNWEEEVEKAKNRLVKWQDIIKKPLLNES*

Transcript Sequence

Transcript ID

PGSC0003DMT400042438
Transcript Infomation

pacid=37425608 locus=PGSC0003DMG400016457 ID=PGSC0003DMT400042438.v4.03 annot-version=v4.03
Sequence

ATGGATGAGTGTTTTCAAGATAAGGGGCCAAGTGAACCTTTACTAGTACTAGAACAGAAA
GAAGCAGCAGTGGAACATGTAAGCTCTGAGCTTGAAGACATATTGTCCGACACAAGATTG
TCGCATTTTCAGCGGCTTGGACGGGCATCTGCCGTTGAATTCAGAAATCTGTTTCGACTA
GCAGCTCCAGCAATCATTGTTTATTTGCTCAATAATGTTACTTCTATGTCTACTCAAATA
TTCTGTGGTCATCTTGGTAATCTTGAACTTGCTGCTGCTTCACTTGGCAATGAAGGTATT
CAACTCTTGGCCTATGGCGTCATGTTAGGGATGGGGAGTGCAGTGGAGACACTATGTGGA
CAAGCATATGGAGCTCACAAGTATGAAACATTGGGAATATATCTTCAAAGATCGACAATT
CTGCTTATGTTATCTGGAATACCGATTATGGTGGCTTACTTATTTTCAAAGCCAATTTTA
ATCTTACTTGGAGAATCAGAGAAAGTTGCATCAGCAGCTGCATTATTCGTTTATGGTTTA
ATTCCTCAAATATTTGCTTACGCTGCCAATTTCCCCATACAAAAGTTCTTGCAAGCCCAA
AGCATCGTGAATCCTAGTGCGTATATAGCAGCAGCCGCATTAGTCCTACATCTTTTCCTA
ACATGGATTGTGCTTTATGTATTCAAGTGGGGATTATTCGGAGGAGCAATGGTTCTAAGT
ATTTCATGGTGGATAGTAGTCGTTGCGCAATTTATGTACATATTGCAGAGCGATAAATGT
AAGAAAACGTGGAATGGATTTAGTTCGCAAGCGTTTTCAGGGCTGTGGGATTTTTATAAG
TTGTCAGCTGCTTCATCTGTGATGTTGTGCTTGGAGACTTGGTACTTTCAGATTTTAGTT
TTAGTTGCTGGTTTGCTTCCAAATCCTGAAGTGGCATTAGACTCTCTAGCTGTTTGTAAT
ACAATTCTTGGATGGGTGTTCATGATAGCTGCTGGGTTCAATGCAGCAGCAAGTGTGAGG
GTGAGCAATGAGTTGGGAGCAGGGCATCCGAAATCGGCCTCATTTTCAGTTTTGGTGGTG
ACATTAAGCTCATTTGTGATTGCTGTAGTGGCAGCCATAATAGTGATGATGTTTCGCGAT
GTGATGAGTTATGCATTCACTGGAGGCGAAACTATTGCTAAAGCAACTTCAGAACTTGCA
CCACTCTTGGCTGCCTCTATAATTCTTAATGGCATTCAGCCTGTTTTATCTGGGGTGGCG
GTTGGGTGTGGATGGCAAGGTTTTGTGGCATATGTTAACGTGGGATGTTACTACGTAGTT
GGTATTCCATTGGGTGCTCTTCTTGGGTTTCACTTCAAACTCGAAGCTAAGGGATTATGG
CTGGGCATGTTTGGTGGAACAGCAATGCAAACTCTTATCTTAGTATGGGCCACTTTTTCA
ACCAATTGGGAAGAAGAGGTGGAGAAAGCAAAAAATCGATTAGTTAAGTGGCAAGACATC
ATTAAGAAACCATTGTTGAATGAATCATGA