Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400042430
CDS Infomation

pacid=37428403 polypeptide=PGSC0003DMP400028782 locus=PGSC0003DMG400016454 ID=PGSC0003DMT400042430.v4.03 annot-version=v4.03
Sequence

ATGAAGATCAGTGATGGGATTGCTAGTTCAATTGATTGTCAGTTGACTACTGATCACAAA
CTGCACCACCGCCGGAAGAAAACAAGAACTCCGGTGGACGGAGATCGGAGGAGAGTAAAA
GGTGAAAGTGGATCAGCCTCAGCCAATCAATTCTTGGTGAGCAAGTTTAATAACCCTTTG
ATGGAAATGGAATACAGAGGATTTGAGCTTTTTAATGGTGGGGCAAAGATGGGTGTTTCT
GCCAGAAAGCTCGCCGCTGGCCTGTGGCATTTGGCGGCGGAGTTCGACTCGGCTGGTGGC
AGTTGCGGCGGCATGAAGCGGCAGTGTGTTTCGATTCATCCGCTCCCTTCTTGGATACCA
ATCCCTAAATCTGTGATGGAGGGAGCTACAAAGTGGGATCCTGGCCACTACAGAGAAGTA
AATCATTCCACCAACCTTGTAAAGCTTTATGAACGTGCTACTACCTCACTTGCTCCTGCC
TTACAATTAGTTGAACTAATAAGAGCAAGAATTCACATTGAAGAGCTAGAAGCCGATAGG
AGGCGTCTTAGAAGGAAATTCAAACACTTTGTGAGGAAGCTGAATGAAGAAAGAACCTCA
TGGATGAGAAAAGAATGTCAGAAGATGCATGCCTTAATTGATGGATTAAAAGATGATTTG
AGAAGAGAGAGAAGAAACTGTAAACAGCTGGATATTGCTAATTCCAAATTGCTGGTTGAT
CTAGCTGATTCAAAGTTATCTTCCAGACAATATATGCATGATTATGAGAAAGAAAGAAAA
TCTCGAGAGTTGTTGGAGGATGTGTGCAATGAGCTAGTCAAGGAGATTGAAGAGGACAGA
GCTGAAATTGAAGCATTGAAGAGTGAAAGTGCCAGACTTGAGGAGGAAGTGGAAGAAGAG
AGAAAAATGCTTCAATTGGCTGAGGTTTGGCGCGAAGAACGGGTTCAAATGAAGCTGATT
GATGCAAAGCTACTTTTAGAAGAAAAATATTGCCTGATGAGTAATCTTATATCAGAACTT
CAGAGCTTTTTGAGAGCTAACAATGTAACTGTGGACATGACTGACTTAATTGAAGTGCAA
GTGGTCAAGCAGCTTGTTGACTCATTGAACATCCAAGAAATAAAGGAGTTCTCTTCAAGC
TCTCCACTATTAAATGACATATATACAAGTTCTATTATATGTGAAGCGTCAAAACTGGGA
ACTAATACCTTCGCTGATTATAGTACTCCTTGTCATTCCTCTGCAATTCAAATTGTTGGT
ACTGAGGTTAGTAAAACATGTGCTATGAACACCAGCAGTGAATGTTTGAATGGCGTTATT
GATCATGAAGAGAGTTGCAAACATGAAAATGGTAGAGAAACAGTGACCCAAGCTGAAGAT
CAGTTTTCGAATAATACTGTTGGTGAAACTGAGCATTCTGTCAATTGTACTGACCGGGGC
AGATATCTTTTATGTGGCAAAGTGAATCATGAGCAAAAATCTGGTTCTCTAGATTTTGAG
ACTAGAGACATCTCCTCAGTATTACCAAAAAAACCGAAGAAGAAAGGATCATCTTTTCGC
AAGCTTTGGAGATCCTCACTGTCAAATGATGACTTCTGTAAGACAATCTCACACGATGAC
AGTGGAAGATTTTCAAATGGATCAACATCTAATGTGGATGTTGTTTTATCAGAGAATGTA
CCAGCTGAAAGAGCACTAGCCTACCAAGATTTTGTGAATCATTGCTGCTCAGGTGGCCCA
AGAAATCCACATACCGCTCGAGCCATGAAAGGATGTATTGAATGGCCACGTGGAATACCG
AAGCATGGTTTGAAGTCCAAACTTTTAGAAGCAAGAATTGAGAGCCAAAAATCGCAATTG
CGCAGTGTGCTTAAACACTTGAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400028782
PEP Infomation

pacid=37428403 transcript=PGSC0003DMT400042430 locus=PGSC0003DMG400016454 ID=PGSC0003DMT400042430.v4.03 annot-version=v4.03
Sequence

MKISDGIASSIDCQLTTDHKLHHRRKKTRTPVDGDRRRVKGESGSASANQFLVSKFNNPL
MEMEYRGFELFNGGAKMGVSARKLAAGLWHLAAEFDSAGGSCGGMKRQCVSIHPLPSWIP
IPKSVMEGATKWDPGHYREVNHSTNLVKLYERATTSLAPALQLVELIRARIHIEELEADR
RRLRRKFKHFVRKLNEERTSWMRKECQKMHALIDGLKDDLRRERRNCKQLDIANSKLLVD
LADSKLSSRQYMHDYEKERKSRELLEDVCNELVKEIEEDRAEIEALKSESARLEEEVEEE
RKMLQLAEVWREERVQMKLIDAKLLLEEKYCLMSNLISELQSFLRANNVTVDMTDLIEVQ
VVKQLVDSLNIQEIKEFSSSSPLLNDIYTSSIICEASKLGTNTFADYSTPCHSSAIQIVG
TEVSKTCAMNTSSECLNGVIDHEESCKHENGRETVTQAEDQFSNNTVGETEHSVNCTDRG
RYLLCGKVNHEQKSGSLDFETRDISSVLPKKPKKKGSSFRKLWRSSLSNDDFCKTISHDD
SGRFSNGSTSNVDVVLSENVPAERALAYQDFVNHCCSGGPRNPHTARAMKGCIEWPRGIP
KHGLKSKLLEARIESQKSQLRSVLKHLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400042430
Transcript Infomation

pacid=37428403 locus=PGSC0003DMG400016454 ID=PGSC0003DMT400042430.v4.03 annot-version=v4.03
Sequence

ATGAAGATCAGTGATGGGATTGCTAGTTCAATTGATTGTCAGTTGACTACTGATCACAAA
CTGCACCACCGCCGGAAGAAAACAAGAACTCCGGTGGACGGAGATCGGAGGAGAGTAAAA
GGTGAAAGTGGATCAGCCTCAGCCAATCAATTCTTGGTGAGCAAGTTTAATAACCCTTTG
ATGGAAATGGAATACAGAGGATTTGAGCTTTTTAATGGTGGGGCAAAGATGGGTGTTTCT
GCCAGAAAGCTCGCCGCTGGCCTGTGGCATTTGGCGGCGGAGTTCGACTCGGCTGGTGGC
AGTTGCGGCGGCATGAAGCGGCAGTGTGTTTCGATTCATCCGCTCCCTTCTTGGATACCA
ATCCCTAAATCTGTGATGGAGGGAGCTACAAAGTGGGATCCTGGCCACTACAGAGAAGTA
AATCATTCCACCAACCTTGTAAAGCTTTATGAACGTGCTACTACCTCACTTGCTCCTGCC
TTACAATTAGTTGAACTAATAAGAGCAAGAATTCACATTGAAGAGCTAGAAGCCGATAGG
AGGCGTCTTAGAAGGAAATTCAAACACTTTGTGAGGAAGCTGAATGAAGAAAGAACCTCA
TGGATGAGAAAAGAATGTCAGAAGATGCATGCCTTAATTGATGGATTAAAAGATGATTTG
AGAAGAGAGAGAAGAAACTGTAAACAGCTGGATATTGCTAATTCCAAATTGCTGGTTGAT
CTAGCTGATTCAAAGTTATCTTCCAGACAATATATGCATGATTATGAGAAAGAAAGAAAA
TCTCGAGAGTTGTTGGAGGATGTGTGCAATGAGCTAGTCAAGGAGATTGAAGAGGACAGA
GCTGAAATTGAAGCATTGAAGAGTGAAAGTGCCAGACTTGAGGAGGAAGTGGAAGAAGAG
AGAAAAATGCTTCAATTGGCTGAGGTTTGGCGCGAAGAACGGGTTCAAATGAAGCTGATT
GATGCAAAGCTACTTTTAGAAGAAAAATATTGCCTGATGAGTAATCTTATATCAGAACTT
CAGAGCTTTTTGAGAGCTAACAATGTAACTGTGGACATGACTGACTTAATTGAAGTGCAA
GTGGTCAAGCAGCTTGTTGACTCATTGAACATCCAAGAAATAAAGGAGTTCTCTTCAAGC
TCTCCACTATTAAATGACATATATACAAGTTCTATTATATGTGAAGCGTCAAAACTGGGA
ACTAATACCTTCGCTGATTATAGTACTCCTTGTCATTCCTCTGCAATTCAAATTGTTGGT
ACTGAGGTTAGTAAAACATGTGCTATGAACACCAGCAGTGAATGTTTGAATGGCGTTATT
GATCATGAAGAGAGTTGCAAACATGAAAATGGTAGAGAAACAGTGACCCAAGCTGAAGAT
CAGTTTTCGAATAATACTGTTGGTGAAACTGAGCATTCTGTCAATTGTACTGACCGGGGC
AGATATCTTTTATGTGGCAAAGTGAATCATGAGCAAAAATCTGGTTCTCTAGATTTTGAG
ACTAGAGACATCTCCTCAGTATTACCAAAAAAACCGAAGAAGAAAGGATCATCTTTTCGC
AAGCTTTGGAGATCCTCACTGTCAAATGATGACTTCTGTAAGACAATCTCACACGATGAC
AGTGGAAGATTTTCAAATGGATCAACATCTAATGTGGATGTTGTTTTATCAGAGAATGTA
CCAGCTGAAAGAGCACTAGCCTACCAAGATTTTGTGAATCATTGCTGCTCAGGTGGCCCA
AGAAATCCACATACCGCTCGAGCCATGAAAGGATGTATTGAATGGCCACGTGGAATACCG
AAGCATGGTTTGAAGTCCAAACTTTTAGAAGCAAGAATTGAGAGCCAAAAATCGCAATTG
CGCAGTGTGCTTAAACACTTGAATTAG